Fri May 3 22:35:08 UTC 2024 I: starting to build openms/unstable/i386 on jenkins on '2024-05-03 22:34' Fri May 3 22:35:08 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_3/24485/console.log Fri May 3 22:35:08 UTC 2024 I: Downloading source for unstable/openms=2.6.0+cleaned1-4 --2024-05-03 22:35:08-- http://deb.debian.org/debian/pool/main/o/openms/openms_2.6.0%2bcleaned1-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2953 (2.9K) [text/prs.lines.tag] Saving to: ‘openms_2.6.0+cleaned1-4.dsc’ 0K .. 100% 412M=0s 2024-05-03 22:35:08 (412 MB/s) - ‘openms_2.6.0+cleaned1-4.dsc’ saved [2953/2953] Fri May 3 22:35:08 UTC 2024 I: openms_2.6.0+cleaned1-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: openms Binary: libopenms2.6.0, libopenms-dev, topp, openms-common, openms-doc, openms Architecture: any all Version: 2.6.0+cleaned1-4 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: http://www.openms.de Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/debichem-team/openms Vcs-Git: https://salsa.debian.org/debichem-team/openms.git Build-Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev, libboost-iostreams-dev, libboost-date-time-dev, libboost-math-dev, libsqlite3-dev, libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended Package-List: libopenms-dev deb libdevel optional arch=any libopenms2.6.0 deb libs optional arch=any openms deb science optional arch=all openms-common deb science optional arch=all openms-doc deb doc optional arch=all topp deb science optional arch=any Checksums-Sha1: 6f20d0dc6ad8322e54c41767eb456c580709c7e9 213326346 openms_2.6.0+cleaned1.orig.tar.gz a1e236b77b72ca63b8840c8435cdcf2e3692ec45 772668 openms_2.6.0+cleaned1-4.debian.tar.xz Checksums-Sha256: c58c12b00c14d22d548839c0d074a76e4884308e2cb23add3bfc1a04cebbf0af 213326346 openms_2.6.0+cleaned1.orig.tar.gz 12161cb5d31ada9156a92e9fba1d8c66f1aa79fc3bff4870025acbba16506fff 772668 openms_2.6.0+cleaned1-4.debian.tar.xz Files: 28b658ae4359a0b7227e713cd14eabd5 213326346 openms_2.6.0+cleaned1.orig.tar.gz 27d80d86e099183c54cdcbc3d43bbcca 772668 openms_2.6.0+cleaned1-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEu71F6oGKuG/2fnKF0+Fzg8+n/wYFAmWG7YsACgkQ0+Fzg8+n /wa5PhAAnCahPUia7Y1aqIPUhIL2aGl3QAD99vTHlL0SFPZzDHm+y44uqD2vu0ld zGzS7djO7yaJeemkKnJwRpmxYtWgnLBs1JJkTF7Xm8kuLR8XYn57uDhdXDhbqjOq AaCZgD+kIRleCFl2QEgi5M0qZBITphmpxABcWik8UEOnGdRAkFCAoV5jumb8toM+ KGDdzZ5veLz/J6I1je8g+ORylqbiQ+JOFDFmXmWJtSF1CqSuI2axnaCmD7vZwKv8 Z6fPSBHeEtnMgjUX8Q+/TLbBsK9s9tpphvST61ZaxdVTz3wY1/gVKrKtl+6pXXtP vhhnB3zbePuLhBTriELZ9D9qicFrdA5GstqdKXKOo791SXtw3n4snmcyeM/W7Khv 0VZHXWBxQL+CzL2BZ5uW/PWDtbS4cm2MgKRdAI9/c83QMIgcj9d6bZXNl9GUh2Cn V/maISxqB9tnCRKym6EOCiBYUjTSQGmilF2+ut7N6BVzB3Jka2nLaEy+R33wA/Q6 m125v4BqTGTKQPcxS6QGwsO3QbGr4HIm5mMnvyqNo3vZ5jzFnF6TIeGG2PeXb1JG aK1qDnsckkxFQTSxn58i7z0Cd9Bw+5R5j17WzHnxUa8XhLW2lTSGwiubonGizwEV gqp1lJiyZXK/SfRwF8X47IyFqsMrC+OnmeEXNBDGhJtvjroBE2E= =SFn8 -----END PGP SIGNATURE----- Fri May 3 22:35:08 UTC 2024 I: Checking whether the package is not for us Fri May 3 22:35:08 UTC 2024 I: Starting 1st build on remote node ionos2-i386.debian.net. Fri May 3 22:35:08 UTC 2024 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Sat May 4 01:39:09 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 3 10:35:14 -12 2024 I: pbuilder-time-stamp: 1714775714 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [openms_2.6.0+cleaned1-4.dsc] I: copying [./openms_2.6.0+cleaned1.orig.tar.gz] I: copying [./openms_2.6.0+cleaned1-4.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Dec 23 14:24:11 2023 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./openms_2.6.0+cleaned1-4.dsc: no acceptable signature found dpkg-source: info: extracting openms in openms-2.6.0+cleaned1 dpkg-source: info: unpacking openms_2.6.0+cleaned1.orig.tar.gz dpkg-source: info: unpacking openms_2.6.0+cleaned1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying sonameAndNameLinkSkipCmakeBuildSystem.patch dpkg-source: info: applying installDirsSettingsCmakeBuildSystem.patch dpkg-source: info: applying fix-glpk-version-check.patch dpkg-source: info: applying add_missing_boost_header.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/34409/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='619ba44d51e84d7386be901d65cbdb48' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='34409' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/pbuilderrc_NVxi --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/b1 --logfile b1/build.log openms_2.6.0+cleaned1-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 2 07:42 /bin -> usr/bin I: user script /srv/workspace/pbuilder/34409/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev, libboost-iostreams-dev, libboost-date-time-dev, libboost-math-dev, libsqlite3-dev, libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19679 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec (>= 0.3); however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.1.2); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libxerces-c-dev (>= 3.2.2); however: Package libxerces-c-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libwildmagic-dev (>= 5.17); however: Package libwildmagic-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libsvm-dev (>= 3.21); however: Package libsvm-dev is not installed. pbuilder-satisfydepends-dummy depends on libglpk-dev (>= 4.65); however: Package libglpk-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev (>= 1.2.7); however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev (>= 1.0.6); however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on cppcheck (>= 1.54); however: Package cppcheck is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev (>= 5.11.3); however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev (>= 5.11.3); however: Package libqt5opengl5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5svg5-dev (>= 5.11.3); however: Package libqt5svg5-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcbc-dev (>= 2.9.9); however: Package coinor-libcbc-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcgl-dev (>= 0.59.10); however: Package coinor-libcgl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on imagemagick; however: Package imagemagick is not installed. pbuilder-satisfydepends-dummy depends on doxygen (>= 1.8.13); however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-extra-utils; however: Package texlive-extra-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-extra; however: Package texlive-fonts-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-font-utils; however: Package texlive-font-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on tex-gyre; however: Package tex-gyre is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} coinor-libcbc-dev{a} coinor-libcbc3.1{a} coinor-libcgl-dev{a} coinor-libcgl1{a} coinor-libclp-dev{a} coinor-libclp1{a} coinor-libcoinutils-dev{a} coinor-libcoinutils3v5{a} coinor-libosi-dev{a} coinor-libosi1v5{a} cppcheck{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} graphviz{a} groff-base{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} imagemagick{a} imagemagick-6-common{a} imagemagick-6.q16{a} intltool-debian{a} libabsl20230802{a} libaec-dev{a} libaec0{a} libamd3{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libblas-dev{a} libblas3{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbsd0{a} libbtf2{a} libbz2-dev{a} libcairo2{a} libcamd3{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp16t64{a} libclang1-16t64{a} libcolamd3{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libexpat1{a} libfftw3-double3{a} libfile-homedir-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfmt9{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglpk-dev{a} libglpk40{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu-dev{a} libicu72{a} libidn12{a} libijs-0.35{a} libinput-bin{a} libinput10{a} libjbig0{a} libjbig2dec0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libklu2{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.5-0{a} libldl3{a} liblerc4{a} libllvm16t64{a} libllvm17t64{a} liblqr-1-0{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmagickcore-6.q16-7t64{a} libmagickwand-6.q16-7t64{a} libmd4c0{a} libmime-charset-perl{a} libmtdev1t64{a} libnghttp2-14{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparu0{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl5t64{a} libptexenc1{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5gui5t64{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5svg5{a} libqt5svg5-dev{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} librav1e0{a} libraw23t64{a} librbio4{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsombok3{a} libspex3{a} libspqr4{a} libsqlite3-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsvm-dev{a} libsvm3{a} libsynctex2{a} libsz2{a} libteckit0{a} libtexlua53-5{a} libthai-data{a} libthai0{a} libtiff6{a} libtinyxml2-10{a} libtool{a} libuchardet0{a} libumfpack6{a} libunicode-linebreak-perl{a} libuv1t64{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libwildmagic-common{a} libwildmagic-dev{a} libwildmagic5{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxerces-c-dev{a} libxerces-c3.2t64{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxt6t64{a} libxxf86vm1{a} libyaml-tiny-perl{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} lmodern{a} m4{a} man-db{a} media-types{a} netbase{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3-pkg-resources{a} python3-pygments{a} python3.11{a} python3.11-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} t1utils{a} tex-common{a} tex-gyre{a} texlive-base{a} texlive-binaries{a} texlive-extra-utils{a} texlive-font-utils{a} texlive-fonts-extra{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-luatex{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates cm-super curl dbus default-jre dvisvgm fonts-adf-accanthis fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell fonts-clear-sans fonts-comfortaa fonts-comic-neue fonts-croscore fonts-crosextra-caladea fonts-crosextra-carlito fonts-dejavu-extra fonts-droid-fallback fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-inter fonts-lato fonts-liberation2 fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans fonts-paratype fonts-roboto-slab fonts-roboto-unhinted fonts-sil-andika fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix fonts-texgyre fonts-texgyre-math javascript-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libldap-common liblog-log4perl-perl libltdl-dev libmagickcore-6.q16-7-extra libmail-sendmail-perl libnet-dbus-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules libspreadsheet-parseexcel-perl libx11-protocol-perl lynx mesa-vulkan-drivers netpbm ps2eps psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 ruby texlive-fonts-extra-links tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 389 newly installed, 0 to remove and 0 not upgraded. Need to get 1143 MB of archives. After unpacking 3684 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libfftw3-double3 i386 3.3.10-1+b2 [624 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.43-5 [286 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.2+dfsg-1+b4 [449 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1 [23.1 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+23 [252 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+6 [95.2 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 13 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.3.2-0.4+b1 [107 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.4.1-1 [330 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.17.6-1+b2 [10.2 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b1 [195 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.17.6-1+b2 [13.7 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.17.6-1+b2 [299 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.14-2+b1 [165 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.78.4-7 [1522 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 liblqr-1-0 i386 0.4.2-2.1+b1 [31.8 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-7+b1 [395 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.0-2+b3 [197 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libraw23t64 i386 0.21.2-2.1 [407 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.3.2-0.4+b1 [314 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.3.2-0.4+b1 [108 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.3.2-0.4+b1 [122 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-1 [148 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 imagemagick-6-common all 8:6.9.12.98+dfsg1-5.2 [67.1 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libmagickcore-6.q16-7t64 i386 8:6.9.12.98+dfsg1-5.2 [1758 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libmagickwand-6.q16-7t64 i386 8:6.9.12.98+dfsg1-5.2 [298 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libpython3.11-minimal i386 3.11.9-1 [817 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 python3.11-minimal i386 3.11.9-1 [1918 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.11.8-1 [26.3 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 tzdata all 2024a-4 [255 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-4 [69.3 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libpython3.11-stdlib i386 3.11.9-1 [1795 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 python3.11 i386 3.11.9-1 [602 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.11.8-1 [9336 B] Get: 59 http://deb.debian.org/debian unstable/main i386 python3 i386 3.11.8-1 [27.4 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-4 [1194 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40-8 [97.2 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 autoconf all 2.71-3 [332 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 autopoint all 0.21-14 [496 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libarchive13t64 i386 3.7.2-2 [387 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1~rc2-1 [22.8 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 83 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-6 [20.5 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-6 [60.6 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.17+dfsg-1 [198 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.61.0-1+b1 [84.0 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.0-4.1+b2 [225 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.7.1-5 [478 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libjsoncpp25 i386 1.9.5-6+b2 [89.2 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 librhash0 i386 1.4.3-3+b1 [143 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.48.0-1.1 [156 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 cmake-data all 3.29.2-2 [2167 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 cmake i386 3.29.2-2 [11.9 MB] Get: 98 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14-20240429-1 [733 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 coinor-libcoinutils3v5 i386 2.11.4+repack1-4 [473 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 coinor-libosi1v5 i386 0.108.10+ds-1 [282 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 coinor-libclp1 i386 1.17.9+ds-1 [867 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 coinor-libcgl1 i386 0.60.8+ds-1 [421 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 coinor-libcbc3.1 i386 2.10.11+ds1-2 [737 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libblas-dev i386 3.12.0-3 [152 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 liblapack-dev i386 3.12.0-3 [4400 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 coinor-libcoinutils-dev i386 2.11.4+repack1-4 [815 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 coinor-libosi-dev i386 0.108.10+ds-1 [352 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 coinor-libclp-dev i386 1.17.9+ds-1 [1062 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 coinor-libcgl-dev i386 0.60.8+ds-1 [535 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 coinor-libcbc-dev i386 2.10.11+ds1-2 [898 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libtinyxml2-10 i386 10.0.0+dfsg-2+b1 [33.3 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 cppcheck i386 2.14.0-1 [2352 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 125 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 debhelper all 13.15.3 [901 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 dh-exec i386 0.29 [25.9 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20230828-1+b1 [97.8 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libllvm16t64 i386 1:16.0.6-26 [26.9 MB] Get: 135 http://deb.debian.org/debian unstable/main i386 libclang-cpp16t64 i386 1:16.0.6-26 [13.6 MB] Get: 136 http://deb.debian.org/debian unstable/main i386 libclang1-16t64 i386 1:16.0.6-26 [7731 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libfmt9 i386 9.1.0+ds1-2 [119 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2+b1 [5106 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libgs-common all 10.03.0~dfsg-1 [148 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libgs10-common all 10.03.0~dfsg-1 [474 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libavahi-common-data i386 0.8-13+b2 [112 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libavahi-common3 i386 0.8-13+b2 [45.3 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libdbus-1-3 i386 1.14.10-4+b1 [217 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libavahi-client3 i386 0.8-13+b2 [49.3 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libcups2t64 i386 2.4.7-1.2+b1 [264 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libidn12 i386 1.42-2 [81.3 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libijs-0.35 i386 0.35-15.1+b1 [15.7 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libjbig2dec0 i386 0.20-1+b2 [66.5 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libpaper1 i386 1.1.29+b1 [13.0 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libgs10 i386 10.03.0~dfsg-1 [2649 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 ghostscript i386 10.03.0~dfsg-1 [50.2 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.2-9+b1 [40.3 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.2-9+b1 [67.5 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.8.2-2 [1910 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libabsl20230802 i386 20230802.1-4 [521 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-2+b1 [325 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 librav1e0 i386 0.7.1-2 [650 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0~git202401110.af6ac82-1 [108 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.0.4-2 [113 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b1 [57.8 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-9+b3 [129 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2 [158 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-1 [115 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-1 [105 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.0-3+b1 [588 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 8.3.0-2+b1 [2234 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.52.1+ds-1 [224 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.52.1+ds-1 [51.1 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.52.1+ds-1 [36.0 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.2-9+b1 [42.4 kB] Get: 183 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.2-9+b1 [712 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.2-9+b1 [198 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.2-9+b1 [198 kB] Get: 186 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b2 [60.5 kB] Get: 187 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.14-1+b2 [208 kB] Get: 188 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.2-9+b1 [576 kB] Get: 189 http://deb.debian.org/debian unstable/main i386 hdf5-helpers i386 1.10.10+repack-3.3 [23.4 kB] Get: 190 http://deb.debian.org/debian unstable/main i386 hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 191 http://deb.debian.org/debian unstable/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 192 http://deb.debian.org/debian unstable/main i386 imagemagick-6.q16 i386 8:6.9.12.98+dfsg1-5.2 [290 kB] Get: 193 http://deb.debian.org/debian unstable/main i386 imagemagick i386 8:6.9.12.98+dfsg1-5.2 [19.4 kB] Get: 194 http://deb.debian.org/debian unstable/main i386 libaec0 i386 1.1.3-1 [24.5 kB] Get: 195 http://deb.debian.org/debian unstable/main i386 libsz2 i386 1.1.3-1 [7824 B] Get: 196 http://deb.debian.org/debian unstable/main i386 libaec-dev i386 1.1.3-1 [22.4 kB] Get: 197 http://deb.debian.org/debian unstable/main i386 libsuitesparseconfig7 i386 1:7.7.0+dfsg-2 [22.7 kB] Get: 198 http://deb.debian.org/debian unstable/main i386 libamd3 i386 1:7.7.0+dfsg-2 [41.6 kB] Get: 199 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 29-2 [5276 B] Get: 200 http://deb.debian.org/debian unstable/main i386 libboost1.83-dev i386 1.83.0-2.1+b1 [10.6 MB] Get: 201 http://deb.debian.org/debian unstable/main i386 libboost-date-time1.83.0 i386 1.83.0-2.1+b1 [230 kB] Get: 202 http://deb.debian.org/debian unstable/main i386 libboost-serialization1.83.0 i386 1.83.0-2.1+b1 [341 kB] Get: 203 http://deb.debian.org/debian unstable/main i386 libboost-serialization1.83-dev i386 1.83.0-2.1+b1 [384 kB] Get: 204 http://deb.debian.org/debian unstable/main i386 libboost-date-time1.83-dev i386 1.83.0-2.1+b1 [239 kB] Get: 205 http://deb.debian.org/debian unstable/main i386 libboost-date-time-dev i386 1.83.0.2+b2 [3596 B] Get: 206 http://deb.debian.org/debian unstable/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 207 http://deb.debian.org/debian unstable/main i386 libboost-regex1.83.0 i386 1.83.0-2.1+b1 [328 kB] Get: 208 http://deb.debian.org/debian unstable/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 209 http://deb.debian.org/debian unstable/main i386 libboost-regex1.83-dev i386 1.83.0-2.1+b1 [347 kB] Get: 210 http://deb.debian.org/debian unstable/main i386 libboost-iostreams1.83-dev i386 1.83.0-2.1+b1 [264 kB] Get: 211 http://deb.debian.org/debian unstable/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 212 http://deb.debian.org/debian unstable/main i386 libboost-math1.83.0 i386 1.83.0-2.1+b1 [440 kB] Get: 213 http://deb.debian.org/debian unstable/main i386 libboost-math1.83-dev i386 1.83.0-2.1+b1 [523 kB] Get: 214 http://deb.debian.org/debian unstable/main i386 libboost-math-dev i386 1.83.0.2+b2 [3800 B] Get: 215 http://deb.debian.org/debian unstable/main i386 libbtf2 i386 1:7.7.0+dfsg-2 [24.4 kB] Get: 216 http://deb.debian.org/debian unstable/main i386 libcamd3 i386 1:7.7.0+dfsg-2 [39.5 kB] Get: 217 http://deb.debian.org/debian unstable/main i386 libccolamd3 i386 1:7.7.0+dfsg-2 [42.1 kB] Get: 218 http://deb.debian.org/debian unstable/main i386 libcolamd3 i386 1:7.7.0+dfsg-2 [34.1 kB] Get: 219 http://deb.debian.org/debian unstable/main i386 libcholmod5 i386 1:7.7.0+dfsg-2 [714 kB] Get: 220 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 221 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 222 http://deb.debian.org/debian unstable/main i386 libcurl3t64-gnutls i386 8.7.1-5 [468 kB] Get: 223 http://deb.debian.org/debian unstable/main i386 libcurl4-openssl-dev i386 8.7.1-5 [600 kB] Get: 224 http://deb.debian.org/debian unstable/main i386 libcxsparse4 i386 1:7.7.0+dfsg-2 [99.3 kB] Get: 225 http://deb.debian.org/debian unstable/main i386 libdouble-conversion3 i386 3.3.0-1+b1 [44.9 kB] Get: 226 http://deb.debian.org/debian unstable/main i386 libdrm-common all 2.4.120-2 [7688 B] Get: 227 http://deb.debian.org/debian unstable/main i386 libdrm2 i386 2.4.120-2 [41.4 kB] Get: 228 http://deb.debian.org/debian unstable/main i386 libdrm-amdgpu1 i386 2.4.120-2 [24.4 kB] Get: 229 http://deb.debian.org/debian unstable/main i386 libpciaccess0 i386 0.17-3+b1 [53.8 kB] Get: 230 http://deb.debian.org/debian unstable/main i386 libdrm-intel1 i386 2.4.120-2 [66.5 kB] Get: 231 http://deb.debian.org/debian unstable/main i386 libdrm-nouveau2 i386 2.4.120-2 [20.8 kB] Get: 232 http://deb.debian.org/debian unstable/main i386 libdrm-radeon1 i386 2.4.120-2 [23.0 kB] Get: 233 http://deb.debian.org/debian unstable/main i386 libglvnd0 i386 1.7.0-1+b1 [44.4 kB] Get: 234 http://deb.debian.org/debian unstable/main i386 libwayland-server0 i386 1.22.0-2.1+b1 [34.8 kB] Get: 235 http://deb.debian.org/debian unstable/main i386 libxcb-randr0 i386 1.17.0-1 [117 kB] Get: 236 http://deb.debian.org/debian unstable/main i386 libgbm1 i386 24.0.6-1+b1 [42.2 kB] Get: 237 http://deb.debian.org/debian unstable/main i386 libglapi-mesa i386 24.0.6-1+b1 [36.2 kB] Get: 238 http://deb.debian.org/debian unstable/main i386 libwayland-client0 i386 1.22.0-2.1+b1 [26.4 kB] Get: 239 http://deb.debian.org/debian unstable/main i386 libx11-xcb1 i386 2:1.8.7-1+b1 [232 kB] Get: 240 http://deb.debian.org/debian unstable/main i386 libxcb-dri2-0 i386 1.17.0-1 [106 kB] Get: 241 http://deb.debian.org/debian unstable/main i386 libxcb-dri3-0 i386 1.17.0-1 [107 kB] Get: 242 http://deb.debian.org/debian unstable/main i386 libxcb-present0 i386 1.17.0-1 [105 kB] Get: 243 http://deb.debian.org/debian unstable/main i386 libxcb-sync1 i386 1.17.0-1 [108 kB] Get: 244 http://deb.debian.org/debian unstable/main i386 libxcb-xfixes0 i386 1.17.0-1 [109 kB] Get: 245 http://deb.debian.org/debian unstable/main i386 libxshmfence1 i386 1.3-1+b1 [9028 B] Get: 246 http://deb.debian.org/debian unstable/main i386 libegl-mesa0 i386 24.0.6-1+b1 [129 kB] Get: 247 http://deb.debian.org/debian unstable/main i386 libegl1 i386 1.7.0-1+b1 [36.2 kB] Get: 248 http://deb.debian.org/debian unstable/main i386 libxcb-glx0 i386 1.17.0-1 [123 kB] Get: 249 http://deb.debian.org/debian unstable/main i386 libxfixes3 i386 1:6.0.0-2+b1 [20.7 kB] Get: 250 http://deb.debian.org/debian unstable/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 251 http://deb.debian.org/debian unstable/main i386 libvulkan1 i386 1.3.280.0-1 [132 kB] Get: 252 http://deb.debian.org/debian unstable/main i386 libllvm17t64 i386 1:17.0.6-11 [27.7 MB] Get: 253 http://deb.debian.org/debian unstable/main i386 libsensors-config all 1:3.6.0-9 [14.6 kB] Get: 254 http://deb.debian.org/debian unstable/main i386 libsensors5 i386 1:3.6.0-9 [35.4 kB] Get: 255 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dri i386 24.0.6-1+b1 [8455 kB] Get: 256 http://deb.debian.org/debian unstable/main i386 libglx-mesa0 i386 24.0.6-1+b1 [158 kB] Get: 257 http://deb.debian.org/debian unstable/main i386 libglx0 i386 1.7.0-1+b1 [38.0 kB] Get: 258 http://deb.debian.org/debian unstable/main i386 libgl1 i386 1.7.0-1+b1 [82.7 kB] Get: 259 http://deb.debian.org/debian unstable/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 260 http://deb.debian.org/debian unstable/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 261 http://deb.debian.org/debian unstable/main i386 libxau-dev i386 1:1.0.9-1+b1 [21.6 kB] Get: 262 http://deb.debian.org/debian unstable/main i386 libxdmcp-dev i386 1:1.1.2-3+b1 [41.5 kB] Get: 263 http://deb.debian.org/debian unstable/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 264 http://deb.debian.org/debian unstable/main i386 libpthread-stubs0-dev i386 0.4-1+b1 [5320 B] Get: 265 http://deb.debian.org/debian unstable/main i386 libxcb1-dev i386 1.17.0-1 [185 kB] Get: 266 http://deb.debian.org/debian unstable/main i386 libx11-dev i386 2:1.8.7-1+b1 [904 kB] Get: 267 http://deb.debian.org/debian unstable/main i386 libglx-dev i386 1.7.0-1+b1 [15.8 kB] Get: 268 http://deb.debian.org/debian unstable/main i386 libgl-dev i386 1.7.0-1+b1 [101 kB] Get: 269 http://deb.debian.org/debian unstable/main i386 libegl-dev i386 1.7.0-1+b1 [19.5 kB] Get: 270 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 271 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 272 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 273 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Get: 274 http://deb.debian.org/debian unstable/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 275 http://deb.debian.org/debian unstable/main i386 libevdev2 i386 1.13.1+dfsg-1+b1 [30.8 kB] Get: 276 http://deb.debian.org/debian unstable/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Get: 277 http://deb.debian.org/debian unstable/main i386 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 278 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 279 http://deb.debian.org/debian unstable/main i386 libglpk40 i386 5.0-1+b1 [420 kB] Get: 280 http://deb.debian.org/debian unstable/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-2+b1 [330 kB] Get: 281 http://deb.debian.org/debian unstable/main i386 libgmp-dev i386 2:6.3.0+dfsg-2+b1 [659 kB] Get: 282 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get: 283 http://deb.debian.org/debian unstable/main i386 libklu2 i386 1:7.7.0+dfsg-2 [91.5 kB] Get: 284 http://deb.debian.org/debian unstable/main i386 libldl3 i386 1:7.7.0+dfsg-2 [23.6 kB] Get: 285 http://deb.debian.org/debian unstable/main i386 libsuitesparse-mongoose3 i386 1:7.7.0+dfsg-2 [52.8 kB] Get: 286 http://deb.debian.org/debian unstable/main i386 libumfpack6 i386 1:7.7.0+dfsg-2 [308 kB] Get: 287 http://deb.debian.org/debian unstable/main i386 librbio4 i386 1:7.7.0+dfsg-2 [43.7 kB] Get: 288 http://deb.debian.org/debian unstable/main i386 libspqr4 i386 1:7.7.0+dfsg-2 [159 kB] Get: 289 http://deb.debian.org/debian unstable/main i386 libspex3 i386 1:7.7.0+dfsg-2 [66.1 kB] Get: 290 http://deb.debian.org/debian unstable/main i386 libparu0 i386 1:7.7.0+dfsg-2 [76.2 kB] Get: 291 http://deb.debian.org/debian unstable/main i386 libsuitesparse-dev i386 1:7.7.0+dfsg-2 [1673 kB] Get: 292 http://deb.debian.org/debian unstable/main i386 libglpk-dev i386 5.0-1+b1 [509 kB] Get: 293 http://deb.debian.org/debian unstable/main i386 libopengl0 i386 1.7.0-1+b1 [29.5 kB] Get: 294 http://deb.debian.org/debian unstable/main i386 libglu1-mesa i386 9.0.2-1.1+b1 [187 kB] Get: 295 http://deb.debian.org/debian unstable/main i386 libopengl-dev i386 1.7.0-1+b1 [5368 B] Get: 296 http://deb.debian.org/debian unstable/main i386 libglu1-mesa-dev i386 9.0.2-1.1+b1 [230 kB] Get: 297 http://deb.debian.org/debian unstable/main i386 libgudev-1.0-0 i386 238-5 [14.9 kB] Get: 298 http://deb.debian.org/debian unstable/main i386 libhdf5-103-1t64 i386 1.10.10+repack-3.3 [1178 kB] Get: 299 http://deb.debian.org/debian unstable/main i386 libhdf5-cpp-103-1t64 i386 1.10.10+repack-3.3 [138 kB] Get: 300 http://deb.debian.org/debian unstable/main i386 libhdf5-fortran-102t64 i386 1.10.10+repack-3.3 [98.2 kB] Get: 301 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-100t64 i386 1.10.10+repack-3.3 [74.4 kB] Get: 302 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-fortran-100t64 i386 1.10.10+repack-3.3 [41.8 kB] Get: 303 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-cpp-100t64 i386 1.10.10+repack-3.3 [21.8 kB] Get: 304 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3 [303 kB] Get: 305 http://deb.debian.org/debian unstable/main i386 libjpeg-dev i386 1:2.1.5-3 [71.9 kB] Get: 306 http://deb.debian.org/debian unstable/main i386 libssl-dev i386 3.2.1-3 [2744 kB] Get: 307 http://deb.debian.org/debian unstable/main i386 libhdf5-dev i386 1.10.10+repack-3.3 [2772 kB] Get: 308 http://deb.debian.org/debian unstable/main i386 libwacom-common all 2.10.0-2 [62.5 kB] Get: 309 http://deb.debian.org/debian unstable/main i386 libwacom9 i386 2.10.0-2 [23.8 kB] Get: 310 http://deb.debian.org/debian unstable/main i386 libinput-bin i386 1.25.0-1+b2 [25.2 kB] Get: 311 http://deb.debian.org/debian unstable/main i386 libmtdev1t64 i386 1.1.6-1.2 [22.6 kB] Get: 312 http://deb.debian.org/debian unstable/main i386 libinput10 i386 1.25.0-1+b2 [144 kB] Get: 313 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 314 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2023.20230311.66589-9+b2 [157 kB] Get: 315 http://deb.debian.org/debian unstable/main i386 libmd4c0 i386 0.4.8-1+b1 [45.2 kB] Get: 316 http://deb.debian.org/debian unstable/main i386 libmime-charset-perl all 1.013.1-2 [34.0 kB] Get: 317 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 1.1.29+b1 [9280 B] Get: 318 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.42-4+b1 [244 kB] Get: 319 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 320 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b1 [24.2 kB] Get: 321 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2023.20230311.66589-9+b2 [48.3 kB] Get: 322 http://deb.debian.org/debian unstable/main i386 shared-mime-info i386 2.4-4 [760 kB] Get: 323 http://deb.debian.org/debian unstable/main i386 libqt5core5t64 i386 5.15.10+dfsg-7.2+b1 [2696 kB] Get: 324 http://deb.debian.org/debian unstable/main i386 libqt5concurrent5t64 i386 5.15.10+dfsg-7.2+b1 [44.6 kB] Get: 325 http://deb.debian.org/debian unstable/main i386 libqt5dbus5t64 i386 5.15.10+dfsg-7.2+b1 [237 kB] Get: 326 http://deb.debian.org/debian unstable/main i386 libqt5network5t64 i386 5.15.10+dfsg-7.2+b1 [766 kB] Get: 327 http://deb.debian.org/debian unstable/main i386 libxcb-icccm4 i386 0.4.1-1.1+b1 [27.5 kB] Get: 328 http://deb.debian.org/debian unstable/main i386 libxcb-util1 i386 0.4.0-1+b1 [23.6 kB] Get: 329 http://deb.debian.org/debian unstable/main i386 libxcb-image0 i386 0.4.0-2+b1 [22.8 kB] Get: 330 http://deb.debian.org/debian unstable/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB] Get: 331 http://deb.debian.org/debian unstable/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB] Get: 332 http://deb.debian.org/debian unstable/main i386 libxcb-shape0 i386 1.17.0-1 [105 kB] Get: 333 http://deb.debian.org/debian unstable/main i386 libxcb-xinerama0 i386 1.17.0-1 [105 kB] Get: 334 http://deb.debian.org/debian unstable/main i386 libxcb-xinput0 i386 1.17.0-1 [133 kB] Get: 335 http://deb.debian.org/debian unstable/main i386 libxcb-xkb1 i386 1.17.0-1 [131 kB] Get: 336 http://deb.debian.org/debian unstable/main i386 xkb-data all 2.41-2 [795 kB] Get: 337 http://deb.debian.org/debian unstable/main i386 libxkbcommon0 i386 1.6.0-1+b1 [115 kB] Get: 338 http://deb.debian.org/debian unstable/main i386 libxkbcommon-x11-0 i386 1.6.0-1+b1 [17.1 kB] Get: 339 http://deb.debian.org/debian unstable/main i386 libqt5gui5t64 i386 5.15.10+dfsg-7.2+b1 [5972 kB] Get: 340 http://deb.debian.org/debian unstable/main i386 libqt5widgets5t64 i386 5.15.10+dfsg-7.2+b1 [2665 kB] Get: 341 http://deb.debian.org/debian unstable/main i386 libqt5opengl5t64 i386 5.15.10+dfsg-7.2+b1 [163 kB] Get: 342 http://deb.debian.org/debian unstable/main i386 libqt5printsupport5t64 i386 5.15.10+dfsg-7.2+b1 [221 kB] Get: 343 http://deb.debian.org/debian unstable/main i386 libqt5sql5t64 i386 5.15.10+dfsg-7.2+b1 [135 kB] Get: 344 http://deb.debian.org/debian unstable/main i386 libqt5test5t64 i386 5.15.10+dfsg-7.2+b1 [154 kB] Get: 345 http://deb.debian.org/debian unstable/main i386 libqt5xml5t64 i386 5.15.10+dfsg-7.2+b1 [135 kB] Get: 346 http://deb.debian.org/debian unstable/main i386 libvulkan-dev i386 1.3.280.0-1 [1348 kB] Get: 347 http://deb.debian.org/debian unstable/main i386 libxext-dev i386 2:1.3.4-1+b1 [110 kB] Get: 348 http://deb.debian.org/debian unstable/main i386 qt5-qmake-bin i386 5.15.10+dfsg-7.2+b1 [1123 kB] Get: 349 http://deb.debian.org/debian unstable/main i386 qtchooser i386 66-2 [27.8 kB] Get: 350 http://deb.debian.org/debian unstable/main i386 qt5-qmake i386 5.15.10+dfsg-7.2+b1 [223 kB] Get: 351 http://deb.debian.org/debian unstable/main i386 qtbase5-dev-tools i386 5.15.10+dfsg-7.2+b1 [849 kB] Get: 352 http://deb.debian.org/debian unstable/main i386 qtbase5-dev i386 5.15.10+dfsg-7.2+b1 [1124 kB] Get: 353 http://deb.debian.org/debian unstable/main i386 libqt5opengl5-dev i386 5.15.10+dfsg-7.2+b1 [50.6 kB] Get: 354 http://deb.debian.org/debian unstable/main i386 libqt5svg5 i386 5.15.10-2+b2 [151 kB] Get: 355 http://deb.debian.org/debian unstable/main i386 libqt5svg5-dev i386 5.15.10-2+b2 [13.1 kB] Get: 356 http://deb.debian.org/debian unstable/main i386 libsombok3 i386 2.4.0-2+b1 [33.2 kB] Get: 357 http://deb.debian.org/debian unstable/main i386 libsqlite3-dev i386 3.45.3-1 [1173 kB] Get: 358 http://deb.debian.org/debian unstable/main i386 libsvm3 i386 3.24+ds-6+b1 [42.7 kB] Get: 359 http://deb.debian.org/debian unstable/main i386 libsvm-dev i386 3.24+ds-6+b1 [63.2 kB] Get: 360 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2023.20230311.66589-9+b2 [64.9 kB] Get: 361 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1 [284 kB] Get: 362 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2023.20230311.66589-9+b2 [128 kB] Get: 363 http://deb.debian.org/debian unstable/main i386 libunicode-linebreak-perl i386 0.0.20190101-1+b6 [97.6 kB] Get: 364 http://deb.debian.org/debian unstable/main i386 libwildmagic-common all 5.17+cleaned1-7 [7020 kB] Get: 365 http://deb.debian.org/debian unstable/main i386 libwildmagic5 i386 5.17+cleaned1-7+b1 [1594 kB] Get: 366 http://deb.debian.org/debian unstable/main i386 libwildmagic-dev i386 5.17+cleaned1-7+b1 [317 kB] Get: 367 http://deb.debian.org/debian unstable/main i386 libxerces-c3.2t64 i386 3.2.4+debian-1.3 [952 kB] Get: 368 http://deb.debian.org/debian unstable/main i386 libxerces-c-dev i386 3.2.4+debian-1.3 [1778 kB] Get: 369 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.1-1 [81.0 kB] Get: 370 http://deb.debian.org/debian unstable/main i386 libyaml-tiny-perl all 1.74-1 [30.7 kB] Get: 371 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.72+dfsg.1-1.2+b1 [58.1 kB] Get: 372 http://deb.debian.org/debian unstable/main i386 tex-common all 6.18 [32.5 kB] Get: 373 http://deb.debian.org/debian unstable/main i386 lmodern all 2.005-1 [9480 kB] Get: 374 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 375 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 376 http://deb.debian.org/debian unstable/main i386 tex-gyre all 20180621-6 [6209 kB] Get: 377 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2023.20230311.66589-9+b2 [8273 kB] Get: 378 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 379 http://deb.debian.org/debian unstable/main i386 texlive-base all 2023.20240207-1 [22.0 MB] Get: 380 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2023.20240207-1 [1255 kB] Get: 381 http://deb.debian.org/debian unstable/main i386 texlive-luatex all 2023.20240207-1 [25.9 MB] Get: 382 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2023.20240207-1 [29.0 MB] Get: 383 http://deb.debian.org/debian unstable/main i386 texlive-extra-utils all 2023.20240207-1 [63.3 MB] Get: 384 http://deb.debian.org/debian unstable/main i386 texlive-font-utils all 2023.20240207-1 [7046 kB] Get: 385 http://deb.debian.org/debian unstable/main i386 texlive-fonts-extra all 2023.20240207-1 [629 MB] Get: 386 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2023.20240207-1 [4990 kB] Get: 387 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2023.20240207-1 [8843 kB] Get: 388 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2023.20240207-1 [16.7 MB] Get: 389 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2023.20240207-1 [19.7 MB] Fetched 1143 MB in 19s (61.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libfftw3-double3:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19679 files and directories currently installed.) Preparing to unpack .../00-libfftw3-double3_3.3.10-1+b2_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.10-1+b2) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../01-libexpat1_2.6.2-1_i386.deb ... Unpacking libexpat1:i386 (2.6.2-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../02-libbrotli1_1.1.0-2+b3_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../03-libpng16-16t64_1.6.43-5_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.43-5) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../04-libfreetype6_2.13.2+dfsg-1+b4_i386.deb ... Unpacking libfreetype6:i386 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../05-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../06-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../07-libfontenc1_1%3a1.1.8-1_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.8-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../08-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../09-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../10-xfonts-utils_1%3a7.7+6_i386.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../11-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../12-fontconfig-config_2.15.0-1.1_i386.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../13-libfontconfig1_2.15.0-1.1_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-1.1) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../14-libsharpyuv0_1.3.2-0.4+b1_i386.deb ... Unpacking libsharpyuv0:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libdav1d7:i386. Preparing to unpack .../15-libdav1d7_1.4.1-1_i386.deb ... Unpacking libdav1d7:i386 (1.4.1-1) ... Selecting previously unselected package libheif-plugin-dav1d:i386. Preparing to unpack .../16-libheif-plugin-dav1d_1.17.6-1+b2_i386.deb ... Unpacking libheif-plugin-dav1d:i386 (1.17.6-1+b2) ... Selecting previously unselected package libde265-0:i386. Preparing to unpack .../17-libde265-0_1.0.15-1+b1_i386.deb ... Unpacking libde265-0:i386 (1.0.15-1+b1) ... Selecting previously unselected package libheif-plugin-libde265:i386. Preparing to unpack .../18-libheif-plugin-libde265_1.17.6-1+b2_i386.deb ... Unpacking libheif-plugin-libde265:i386 (1.17.6-1+b2) ... Selecting previously unselected package libheif1:i386. Preparing to unpack .../19-libheif1_1.17.6-1+b2_i386.deb ... Unpacking libheif1:i386 (1.17.6-1+b2) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../20-libjbig0_2.1-6.1+b1_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1+b1) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../21-libjpeg62-turbo_1%3a2.1.5-3_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-3) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../22-liblcms2-2_2.14-2+b1_i386.deb ... Unpacking liblcms2-2:i386 (2.14-2+b1) ... Selecting previously unselected package libglib2.0-0t64:i386. Preparing to unpack .../23-libglib2.0-0t64_2.78.4-7_i386.deb ... Unpacking libglib2.0-0t64:i386 (2.78.4-7) ... Selecting previously unselected package liblqr-1-0:i386. Preparing to unpack .../24-liblqr-1-0_0.4.2-2.1+b1_i386.deb ... Unpacking liblqr-1-0:i386 (0.4.2-2.1+b1) ... Selecting previously unselected package libltdl7:i386. Preparing to unpack .../25-libltdl7_2.4.7-7+b1_i386.deb ... Unpacking libltdl7:i386 (2.4.7-7+b1) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../26-libopenjp2-7_2.5.0-2+b3_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.0-2+b3) ... Selecting previously unselected package libraw23t64:i386. Preparing to unpack .../27-libraw23t64_0.21.2-2.1_i386.deb ... Unpacking libraw23t64:i386 (0.21.2-2.1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../28-libdeflate0_1.20-1_i386.deb ... Unpacking libdeflate0:i386 (1.20-1) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../29-liblerc4_4.0.0+ds-4+b1_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-4+b1) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../30-libwebp7_1.3.2-0.4+b1_i386.deb ... Unpacking libwebp7:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../31-libtiff6_4.5.1+git230720-4_i386.deb ... Unpacking libtiff6:i386 (4.5.1+git230720-4) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../32-libwebpdemux2_1.3.2-0.4+b1_i386.deb ... Unpacking libwebpdemux2:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../33-libwebpmux3_1.3.2-0.4+b1_i386.deb ... Unpacking libwebpmux3:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../34-libxau6_1%3a1.0.9-1+b1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-1+b1) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../35-libbsd0_0.12.2-1_i386.deb ... Unpacking libbsd0:i386 (0.12.2-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../36-libxdmcp6_1%3a1.1.2-3+b1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../37-libxcb1_1.17.0-1_i386.deb ... Unpacking libxcb1:i386 (1.17.0-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../38-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../39-libx11-6_2%3a1.8.7-1+b1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.7-1+b1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../40-libxext6_2%3a1.3.4-1+b1_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../41-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../42-libxml2_2.9.14+dfsg-1.3+b3_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package imagemagick-6-common. Preparing to unpack .../43-imagemagick-6-common_8%3a6.9.12.98+dfsg1-5.2_all.deb ... Unpacking imagemagick-6-common (8:6.9.12.98+dfsg1-5.2) ... Selecting previously unselected package libmagickcore-6.q16-7t64:i386. Preparing to unpack .../44-libmagickcore-6.q16-7t64_8%3a6.9.12.98+dfsg1-5.2_i386.deb ... Unpacking libmagickcore-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Selecting previously unselected package libmagickwand-6.q16-7t64:i386. Preparing to unpack .../45-libmagickwand-6.q16-7t64_8%3a6.9.12.98+dfsg1-5.2_i386.deb ... Unpacking libmagickwand-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Selecting previously unselected package poppler-data. Preparing to unpack .../46-poppler-data_0.4.12-1_all.deb ... Unpacking poppler-data (0.4.12-1) ... Selecting previously unselected package libpython3.11-minimal:i386. Preparing to unpack .../47-libpython3.11-minimal_3.11.9-1_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.9-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../48-python3.11-minimal_3.11.9-1_i386.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:i386 (3.11.9-1) ... Setting up libexpat1:i386 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21808 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_i386.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../5-libreadline8t64_8.2-4_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_i386.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:i386. 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Regenerating fonts cache... done. Setting up libavif16:i386 (1.0.4-2) ... Setting up libcholmod5:i386 (1:7.7.0+dfsg-2) ... Setting up libdrm-nouveau2:i386 (2.4.120-2) ... Setting up libxcb1-dev:i386 (1.17.0-1) ... Setting up libxpm4:i386 (1:3.5.17-1+b1) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b1) ... Setting up libcurl4t64:i386 (8.7.1-5) ... Setting up libgbm1:i386 (24.0.6-1+b1) ... Setting up libspqr4:i386 (1:7.7.0+dfsg-2) ... Setting up libsombok3:i386 (2.4.0-2+b1) ... Setting up libdrm-radeon1:i386 (2.4.120-2) ... Setting up libboost-iostreams1.83-dev:i386 (1.83.0-2.1+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.9-1) ... Setting up coinor-libosi-dev:i386 (0.108.10+ds-1) ... Setting up libpango-1.0-0:i386 (1.52.1+ds-1) ... Setting up libdrm-intel1:i386 (2.4.120-2) ... Setting up libgl1-mesa-dri:i386 (24.0.6-1+b1) ... Setting up libx11-dev:i386 (2:1.8.7-1+b1) ... Setting up libcurl3t64-gnutls:i386 (8.7.1-5) ... Setting up libxext6:i386 (2:1.3.4-1+b1) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Setting up libclang1-16t64 (1:16.0.6-26) ... Setting up libxerces-c3.2t64:i386 (3.2.4+debian-1.3) ... Setting up xfonts-utils (1:7.7+6) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-26) ... Setting up libcairo2:i386 (1.18.0-3+b1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libqt5core5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libegl-mesa0:i386 (24.0.6-1+b1) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b1) ... Setting up libcurl4-openssl-dev:i386 (8.7.1-5) ... Setting up libklu2:i386 (1:7.7.0+dfsg-2) ... Setting up libxerces-c-dev:i386 (3.2.4+debian-1.3) ... Setting up coinor-libclp1:i386 (1.17.9+ds-1) ... Setting up libunicode-linebreak-perl (0.0.20190101-1+b6) ... Setting up libxt6t64:i386 (1:1.2.1-1.2) ... Setting up coinor-libclp-dev:i386 (1.17.9+ds-1) ... Setting up libxext-dev:i386 (2:1.3.4-1+b1) ... Setting up libumfpack6:i386 (1:7.7.0+dfsg-2) ... Setting up lmodern (2.005-1) ... Setting up libegl1:i386 (1.7.0-1+b1) ... Setting up libqt5sql5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up cmake (3.29.2-2) ... Setting up coinor-libcgl1:i386 (0.60.8+ds-1) ... Setting up libpangoft2-1.0-0:i386 (1.52.1+ds-1) ... Setting up libhdf5-103-1t64:i386 (1.10.10+repack-3.3) ... Setting up libcups2t64:i386 (2.4.7-1.2+b1) ... Setting up tex-gyre (20180621-6) ... Setting up libpangocairo-1.0-0:i386 (1.52.1+ds-1) ... Setting up libpython3-stdlib:i386 (3.11.8-1) ... Setting up coinor-libcgl-dev:i386 (0.60.8+ds-1) ... Setting up libhdf5-hl-100t64:i386 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b2) ... Setting up libqt5dbus5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libglx-mesa0:i386 (24.0.6-1+b1) ... Setting up libxi6:i386 (2:1.8.1-1) ... Setting up libglx0:i386 (1.7.0-1+b1) ... Setting up libqt5concurrent5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up preview-latex-style (13.2-1) ... Setting up libhdf5-cpp-103-1t64:i386 (1.10.10+repack-3.3) ... Setting up libqt5network5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libhdf5-fortran-102t64:i386 (1.10.10+repack-3.3) ... Setting up libqt5xml5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up debhelper (13.15.3) ... Setting up libparu0:i386 (1:7.7.0+dfsg-2) ... Setting up python3 (3.11.8-1) ... Setting up dh-exec (0.29) ... Setting up libxaw7:i386 (2:1.0.14-1+b2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libqt5test5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up qtbase5-dev-tools (5.15.10+dfsg-7.2+b1) ... Setting up libgl1:i386 (1.7.0-1+b1) ... Setting up coinor-libcbc3.1:i386 (2.10.11+ds1-2) ... Setting up texlive-binaries (2023.20230311.66589-9+b2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libglx-dev:i386 (1.7.0-1+b1) ... Setting up libhdf5-hl-cpp-100t64:i386 (1.10.10+repack-3.3) ... Setting up coinor-libcbc-dev:i386 (2.10.11+ds1-2) ... Setting up texlive-base (2023.20240207-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libgl-dev:i386 (1.7.0-1+b1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up libgs10-common (10.03.0~dfsg-1) ... Setting up libvulkan-dev:i386 (1.3.280.0-1) ... Setting up libsuitesparse-dev:i386 (1:7.7.0+dfsg-2) ... Setting up libegl-dev:i386 (1.7.0-1+b1) ... Setting up texlive-luatex (2023.20240207-1) ... Setting up texlive-plain-generic (2023.20240207-1) ... Setting up libwildmagic5:i386 (5.17+cleaned1-7+b1) ... Setting up libhdf5-hl-fortran-100t64:i386 (1.10.10+repack-3.3) ... Setting up texlive-font-utils (2023.20240207-1) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up libqt5gui5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up texlive-latex-base (2023.20240207-1) ... Setting up texlive-extra-utils (2023.20240207-1) ... Setting up libglpk-dev:i386 (5.0-1+b1) ... Setting up texlive-fonts-extra (2023.20240207-1) ... Setting up texlive-latex-recommended (2023.20240207-1) ... Setting up libhdf5-dev (1.10.10+repack-3.3) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglu1-mesa-dev:i386 (9.0.2-1.1+b1) ... Setting up texlive-pictures (2023.20240207-1) ... Setting up cppcheck (2.14.0-1) ... Setting up texlive-fonts-recommended (2023.20240207-1) ... Setting up libgs10:i386 (10.03.0~dfsg-1) ... Setting up libwildmagic-dev:i386 (5.17+cleaned1-7+b1) ... Setting up libqt5widgets5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5svg5:i386 (5.15.10-2+b2) ... Setting up texlive-latex-extra (2023.20240207-1) ... Setting up ghostscript (10.03.0~dfsg-1) ... Setting up libqt5svg5-dev:i386 (5.15.10-2+b2) ... Setting up libqt5opengl5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5printsupport5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up qtbase5-dev:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5opengl5-dev:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libheif-plugin-dav1d:i386 (1.17.6-1+b2) ... Setting up libheif-plugin-libde265:i386 (1.17.6-1+b2) ... Setting up libheif1:i386 (1.17.6-1+b2) ... Setting up libmagickcore-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Setting up libmagickwand-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Setting up libgd3:i386 (2.3.3-9+b3) ... Setting up libgvc6 (2.42.2-9+b1) ... Setting up imagemagick-6.q16 (8:6.9.12.98+dfsg1-5.2) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up graphviz (2.42.2-9+b1) ... Setting up imagemagick (8:6.9.12.98+dfsg1-5.2) ... Processing triggers for libc-bin (2.37-19) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.34-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/openms-2.6.0+cleaned1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openms_2.6.0+cleaned1-4_source.changes dpkg-buildpackage: info: source package openms dpkg-buildpackage: info: source version 2.6.0+cleaned1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Anton Gladky dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_auto_clean -O--buildsystem=cmake -O--no-parallel dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' entering the override_dh_clean target # Remove the generated xpm icon files: rm -f debian/TOPPAS.xpm rm -f debian/TOPPView.xpm # Remove the generated topp.1 man page: rm -f debian/topp.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars debian/files rm -fr -- debian/libopenms2.6.0/ debian/tmp/ debian/libopenms-dev/ debian/topp/ debian/openms-common/ debian/openms-doc/ debian/openms/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' debian/rules build dh build --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_update_autotools_config -O--buildsystem=cmake -O--no-parallel dh_autoreconf -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_auto_configure -- \ -DDEBIAN_BUILD=ON \ -DHAS_XSERVER=OFF \ -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \ -DCMAKE_SKIP_RPATH=ON \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DOPENMS_CONTRIB_LIBS="/usr/lib;/usr/lib/i386-linux-gnu" \ -DCMAKE_BUILD_TYPE=release \ -DBOOST_USE_STATIC=OFF \ -DENABLE_STYLE_TESTING=OFF \ -DENABLE_TOPP_TESTING=OFF \ -DENABLE_CLASS_TESTING=OFF \ -DENABLE_PIPELINE_TESTING=OFF \ -DENABLE_TUTORIALS=ON \ -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0+cleaned1/debian cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DDEBIAN_BUILD=ON -DHAS_XSERVER=OFF -DCMAKE_FIND_LIBRARY_SUFFIXES=.so -DCMAKE_SKIP_RPATH=ON -DCMAKE_INSTALL_PREFIX=/usr -DOPENMS_CONTRIB_LIBS=/usr/lib\;/usr/lib/i386-linux-gnu -DCMAKE_BUILD_TYPE=release -DBOOST_USE_STATIC=OFF -DENABLE_STYLE_TESTING=OFF -DENABLE_TOPP_TESTING=OFF -DENABLE_CLASS_TESTING=OFF -DENABLE_PIPELINE_TESTING=OFF -DENABLE_TUTORIALS=ON -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:73 (include): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.29/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:73 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Building OpenMS 2.6.0 -- [CMake cannot track Git commits and branching, since Git or the .git folder was not found. ('-D GIT_TRACKING=On')] -- OpenMP support requested: ON -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Architecture: 32 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Collection of usage statistics and update notifications enabled. -- If you don't want this information to be transmitted to our update sever, you can: -- - Switch the build variable ENABLE_UPDATE_CHECK to OFF to remove the functionality at build time. -- - Set the environment variable OPENMS_DISABLE_UPDATE_CHECK to disable the functionality at runtime. CMake Deprecation Warning at src/openswathalgo/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") CMake Deprecation Warning at src/openswathalgo/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openswathalgo/thirdparty/MIToolbox/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS CMake Deprecation Warning at src/openms/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/eol-bspline/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/evergreen/src/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/IsoSpec/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/json/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found XercesC: /usr/lib/i386-linux-gnu/libxerces-c.so (found version "3.2.4") -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.83.0 -- Found SEQAN: /build/reproducible-path/openms-2.6.0+cleaned1/debian (found suitable version "1.4.2", minimum required is "1.4.0") -- Found LIBSVM: /usr/lib/i386-linux-gnu/libsvm.so (found suitable version "3.2.4", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib/i386-linux-gnu/libglpk.so -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.3.#define ZLIB_VERSION "1.3"") -- Found BZip2: /usr/lib/i386-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so - found -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4") -- Found WM5: /usr/include/libwildmagic CMake Warning (dev) at /usr/share/cmake-3.29/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (SQLite) does not match the name of the calling package (SQLITE). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindSQLITE.cmake:201 (find_package_handle_standard_args) src/openms/cmake_findExternalLibs.cmake:134 (find_package) src/openms/CMakeLists.txt:70 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found SQLite: /usr/include (found version "3.45.3") -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.10.10") found components: C CXX HL -- Found Qt 5.15.10 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/resource.h -- Looking for C++ include sys/resource.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS CMake Deprecation Warning at src/superhirn/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") -- Adding library SuperHirn -- Adding library SuperHirn - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.rc) found for SwathWizard. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. CMake Deprecation Warning at src/tests/CMakeLists.txt:35 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot CMake Warning (dev) at doc/CMakeLists.txt:142 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. This warning is for project developers. Use -Wno-dev to suppress it. -- Enabled tutorials (-D ENABLE_TUTORIALS=On). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done (15.8s) -- Generating done (4.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu # Prepare the xpm-formatted pixmaps for the Debian menu system. # Setting imagemagick to Build-Depends, for use of convert. convert src/openms_gui/source/VISUAL/ICONS/TOPPAS.png -resize 32x32 debian/TOPPAS.xpm convert src/openms_gui/source/VISUAL/ICONS/TOPPView.png -resize 32x32 debian/TOPPView.xpm make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' # Build the libs and executable binaries # Build the documentation, which needs a running XWindow server. We # thus use the doc_minimal target. # # ATTENTION, as of 20200514, the pdfLatex compilation fails with error # ! LaTeX Error: Command `\Bbbk' already defined. # This is why we commented out the doc_tutorials target below. # See also the override_dh_auto_configure target above, that disables # that specific doc_tutorials target. VERBOSE=1 \ dh_auto_build -- \ OpenMS GUI TOPP UTILS cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 OpenMS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 53 make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: In function 'void* checkedCalloc(size_t, size_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /usr/include/c++/13/complex:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:40: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp: In function 'void OpenSwath::normalize(const std::vector&, double, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:54:106: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = divides; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 54 | std::transform(intensities.begin(), intensities.end(), normalized_intensities.begin(), std::bind2nd(std::divides(), normalizer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp [ 1%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenSwathAlgo.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Automatic MOC for target OpenMS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_data_path.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/config.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_package_version.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/EnumHelpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/MacrosTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Init.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/RAIICleanup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HDF5Connector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/RegressionUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeQueryMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMoleculeGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/QueryMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/DBSuitability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FWHM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PeptideMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/BuildInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/PythonInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DecoyGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Constants.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/RAIICleanup.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/DBSuitability.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FWHM.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PeptideMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/ExternalProcess.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/PythonInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] creating build_config.h file ({event: PRE_BUILD}, {filename: build_config.h}) cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config_release.h /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp:10, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp:2: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -MF CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ClassTest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Constants.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Exception.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/FuzzyStringComparator.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp: In constructor 'OpenMS::Exception::GlobalExceptionHandler::GlobalExceptionHandler()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:65:26: warning: 'void (* std::set_unexpected(unexpected_handler))()' is deprecated [-Wdeprecated-declarations] 65 | std::set_unexpected(terminate); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ In file included from /usr/include/c++/13/ios:41, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:38: /usr/include/c++/13/exception:89:22: note: declared here 89 | unexpected_handler set_unexpected(unexpected_handler) _GLIBCXX_USE_NOEXCEPT; | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Init.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogConfigHandler.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogStream.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/PrecisionWrapper.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ProgressLogger.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/RAIICleanup.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/SingletonRegistry.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/StreamHandler.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/TypeAsString.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Types.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdGenerator.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdIndexer.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdInterface.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:42: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp: In static member function 'static OpenMS::VersionInfo::VersionDetails OpenMS::VersionInfo::getVersionStruct()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:169:51: warning: implicitly-declared 'OpenMS::VersionInfo::VersionDetails& OpenMS::VersionInfo::VersionDetails::operator=(const OpenMS::VersionInfo::VersionDetails&)' is deprecated [-Wdeprecated-copy] 169 | result = VersionDetails::create(getVersion()); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:79:7: note: because 'OpenMS::VersionInfo::VersionDetails' has user-provided 'OpenMS::VersionInfo::VersionDetails::VersionDetails(const OpenMS::VersionInfo::VersionDetails&)' 79 | VersionDetails(const VersionDetails & other): | ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/ExternalProcess.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/File.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/FileWatcher.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/JavaInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/NetworkGetRequest.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/PythonInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/RWrapper.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/StopWatch.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/SysInfo.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/UpdateCheck.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AveragePosition.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GaussFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/Histogram.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegression.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:271:40: note: by 'OpenMS::Math::PosteriorErrorProbabilityModel& OpenMS::Math::PosteriorErrorProbabilityModel::operator=(const OpenMS::Math::PosteriorErrorProbabilityModel&)' 271 | PosteriorErrorProbabilityModel & operator=(const PosteriorErrorProbabilityModel & rhs); | ^~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/ROCCurve.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BilinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/CubicSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/GridSearch.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/LinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MathFunctions.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MSNumpress.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSAC.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModel.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelLinear.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/SplineBisection.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NNLS/NNLS.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Adduct.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ChargePair.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Compomer.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/hashtable_policy.h:36, from /usr/include/c++/13/bits/hashtable.h:35, from /usr/include/c++/13/bits/unordered_map.h:33, from /usr/include/c++/13/unordered_map:41, from /usr/include/c++/13/functional:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVReference.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappings.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DPosition.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DRange.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DataValue.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Date.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DateTime.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/set:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'void OpenMS::LPWrapper::readProblem(const OpenMS::String&, const OpenMS::String&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:472:69: warning: unused parameter 'format' [-Wunused-parameter] 472 | void LPWrapper::readProblem(const String& filename, const String& format) // format=(LP,MPS,GLPK) | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'OpenMS::Int OpenMS::LPWrapper::solve(SolverParam&, OpenMS::Size)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:529:37: warning: unused parameter 'solver_param' [-Wunused-parameter] 529 | Int LPWrapper::solve(SolverParam& solver_param, const Size | ~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Map.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MassExplainer.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Matrix.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Param.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/QTCluster.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1286:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:137:33: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:35: /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {OpenMS::Internal::ToolExternalDetails}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_uninitialized.h:384:41: required from '_ForwardIterator std::__uninitialized_move_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = OpenMS::Internal::ToolExternalDetails*; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Allocator = allocator]' /usr/include/c++/13/bits/vector.tcc:766:34: required from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator]' /usr/include/c++/13/bits/stl_vector.h:1486:19: required from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator; const_iterator = std::vector::const_iterator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:157:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/alloc_traits.h:33, from /usr/include/c++/13/ext/alloc_traits.h:34, from /usr/include/c++/13/bits/basic_string.h:39, from /usr/include/c++/13/string:54: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(OpenMS::Internal::ToolExternalDetails&&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Acquisition.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AcquisitionInfo.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTerm.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermList.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermListInterface.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ContactPerson.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataArrays.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataProcessing.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Digestion.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIDTagger.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIdentifier.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Gradient.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/HPLC.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Identification.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IdentificationHit.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Instrument.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/InstrumentSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonDetector.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonSource.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MassAnalyzer.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfo.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoDescription.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoInterface.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoRegistry.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Modification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideEvidence.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideIdentification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Product.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Sample.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SampleTreatment.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ScanWindow.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Software.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SourceFile.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumIdentification.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Tagging.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/AreaIterator.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/hashtable_policy.h:36, from /usr/include/c++/13/bits/hashtable.h:35, from /usr/include/c++/13/bits/unordered_map.h:33, from /usr/include/c++/13/unordered_map:41, from /usr/include/c++/13/functional:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConversionHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:51: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = double; _Up = double; bool _IsMove = true]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31, inlined from '_OI std::move(_II, _II, _OI) [with _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:665:38, inlined from 'OpenMS::DPosition::DPosition(OpenMS::DPosition&&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:115:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/13/bits/move.h:197:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:211:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:881:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algo.h:1354:19: /usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' forming offset 8 is out of the bounds [0, 8] of object '__tmp' with type 'OpenMS::DPosition<1>' [-Warray-bounds=] 437 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:36, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43: /usr/include/c++/13/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/13/bits/move.h:197:11: note: '__tmp' declared here 197 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ In static member function 'static void std::__copy_move::__assign_one(_Tp*, _Up*) [with _Tp = double; _Up = const double]', inlined from 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]' at /usr/include/c++/13/bits/stl_algobase.h:440:20, inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31, inlined from '_OI std::copy(_II, _II, _OI) [with _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7, inlined from 'OpenMS::DPosition& OpenMS::DPosition::operator=(const OpenMS::DPosition&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:131:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/13/bits/move.h:199:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:211:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:881:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algo.h:1354:19: /usr/include/c++/13/bits/stl_algobase.h:398:17: warning: '__tmp.OpenMS::DPosition<1, double>::coordinate_[0]' may be used uninitialized [-Wmaybe-uninitialized] 398 | { *__to = *__from; } | ~~~~~~^~~~~~~~~ /usr/include/c++/13/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/13/bits/move.h:197:11: note: '__tmp' declared here 197 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/INTERFACES/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/PeakIndex.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RangeManager.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RichPeak2D.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/StandardTypes.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/SpectrumHelper.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/AASequence.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/CrossLinksDB.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DecoyGenerator.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinition.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationsDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NASequence.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:72:35: note: by 'OpenMS::NucleicAcidSpectrumGenerator& OpenMS::NucleicAcidSpectrumGenerator::operator=(const OpenMS::NucleicAcidSpectrumGenerator&)' 72 | NucleicAcidSpectrumGenerator& operator=(const NucleicAcidSpectrumGenerator& source); | ^~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Residue.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueModification.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Ribonucleotide.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:79:25: note: by 'OpenMS::SpectrumAnnotator& OpenMS::SpectrumAnnotator::operator=(const OpenMS::SpectrumAnnotator&)' 79 | SpectrumAnnotator & operator=(const SpectrumAnnotator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataArrays.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:105:46: note: by 'OpenMS::SvmTheoreticalSpectrumGeneratorTrainer& OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::operator=(const OpenMS::SvmTheoreticalSpectrumGeneratorTrainer&)' 105 | SvmTheoreticalSpectrumGeneratorTrainer & operator=(const SvmTheoreticalSpectrumGeneratorTrainer & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp: In member function 'void OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::trainModel(const OpenMS::PeakMap&, const std::vector&, OpenMS::String, OpenMS::Int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:797:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 797 | std::random_shuffle(training_data_by_class[0].begin(), training_data_by_class[0].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:798:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 798 | std::random_shuffle(training_data_by_class[1].begin(), training_data_by_class[1].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Tagger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/WeightWrapper.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/boost/assert/source_location.hpp:15, from /usr/include/boost/exception/exception.hpp:9, from /usr/include/boost/throw_exception.hpp:21, from /usr/include/boost/polymorphic_cast.hpp:79, from /usr/include/boost/cast.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Helpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: In member function 'void OpenMS::Internal::MzMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:94:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 94 | options_ = opt; | ^~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1286:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:194:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:37: /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1286:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolDescription]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:200:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Base64.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2Ifstream.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp: In member function 'virtual XMLSize_t OpenMS::Bzip2InputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp:73:71: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 73 | XMLSize_t actual_read = (XMLSize_t) bzip2_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CompressedInputSource.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CVMappingFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ControlledVocabulary.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CsvFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTA2DFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/EDTAFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp: In member function 'void OpenMS::EDTAFile::load(const OpenMS::String&, OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:162:43: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 162 | consensus_map.getColumnHeaders()[0] = desc; | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:282:45: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 282 | consensus_map.getColumnHeaders()[i] = fd; | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FASTAFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:504:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 504 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'bool OpenMS::FileHandler::loadExperiment(const OpenMS::String&, OpenMS::PeakMap&, OpenMS::FileTypes::Type, OpenMS::ProgressLogger::LogType, bool, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:599:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 599 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:609:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 609 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:619:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 619 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:628:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 628 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::storeExperiment(const OpenMS::String&, const OpenMS::PeakMap&, OpenMS::ProgressLogger::LogType)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:698:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 698 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:707:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 707 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:725:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 725 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:743:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 743 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileTypes.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipIfstream.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp: In member function 'virtual XMLSize_t OpenMS::GzipInputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp:74:70: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 74 | XMLSize_t actual_read = (XMLSize_t) gzip_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HDF5Connector.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IdXMLFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp: In member function 'void OpenMS::IndexedMzMLFileLoader::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:60:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 60 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectInfile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/InspectOutfile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:41: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/LibSVMEncoder.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MS2File.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSNumpressCoder.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotInfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::login()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:182:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 182 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtCore/QObject:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:188:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 188 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:194:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 194 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:199:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 199 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:204:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 204 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:209:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 209 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:214:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 214 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:219:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 219 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:224:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 224 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:229:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 229 | loginbytes.append("--" + boundary + "--\r\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::execQuery()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:355:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 355 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:360:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 360 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/File.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp: In member function 'void OpenMS::MzDataFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:65:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 65 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzIdentMLFile.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp: In member function 'void OpenMS::MzMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:72:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 72 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp: In member function 'void OpenMS::MzXMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:64:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 64 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSACSVFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSAXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OSWFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ParamXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PTMXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoInfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoOutfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFileMascot.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ProtXMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/QcMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestInfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestOutfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqliteConnector.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SqMassFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SwathFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SVOutStream.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TextFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolDescription; _Args = {OpenMS::Internal::ToolDescription&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/13/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/bits/stl_algo.h:69, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:37: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_vector.h:606:31: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/13/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TraMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TransformationXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/UnimodXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemInfile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ZlibCompression.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:84:31: note: by 'OpenMS::IsobaricChannelExtractor& OpenMS::IsobaricChannelExtractor::operator=(const OpenMS::IsobaricChannelExtractor&)' 84 | IsobaricChannelExtractor& operator=(const IsobaricChannelExtractor& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp: In member function 'void OpenMS::IsobaricChannelExtractor::registerChannelsInOutputMap_(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:751:49: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 751 | consensus_map.getColumnHeaders()[index] = channel_as_map; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:66:25: note: by 'OpenMS::IsobaricQuantifier& OpenMS::IsobaricQuantifier::operator=(const OpenMS::IsobaricQuantifier&)' 66 | IsobaricQuantifier& operator=(const IsobaricQuantifier& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:79:38: note: by 'OpenMS::QuantitativeExperimentalDesign& OpenMS::QuantitativeExperimentalDesign::operator=(const OpenMS::QuantitativeExperimentalDesign&)' 79 | QuantitativeExperimentalDesign & operator=(const QuantitativeExperimentalDesign &); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:62:40: note: by 'OpenMS::TMTSixteenPlexQuantitationMethod& OpenMS::TMTSixteenPlexQuantitationMethod::operator=(const OpenMS::TMTSixteenPlexQuantitationMethod&)' 62 | TMTSixteenPlexQuantitationMethod & operator=(const TMTSixteenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:84:23: note: by 'OpenMS::AbsoluteQuantitation& OpenMS::AbsoluteQuantitation::operator=(const OpenMS::AbsoluteQuantitation&)' 84 | class OPENMS_DLLAPI AbsoluteQuantitation : | ^~~~~~~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(svm_problem*, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:611:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 611 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(const OpenMS::SVMData&, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:679:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 679 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp: In member function 'void OpenMS::FeatureGroupingAlgorithm::transferSubelements(const std::vector&, OpenMS::ConsensusMap&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:93:52: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 93 | out.getColumnHeaders()[counter] = desc_it->second; | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:110:42: note: by 'OpenMS::MapAlignmentAlgorithmPoseClustering& OpenMS::MapAlignmentAlgorithmPoseClustering::operator=(const OpenMS::MapAlignmentAlgorithmPoseClustering&)' 110 | MapAlignmentAlgorithmPoseClustering& operator=(const MapAlignmentAlgorithmPoseClustering&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:431:18: warning: 'virtual void OpenMS::TOPPBase::registerOptionsAndFlags_()' was hidden [-Woverloaded-virtual=] 431 | virtual void registerOptionsAndFlags_() = 0; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:123:8: note: by 'void OpenMS::TOPPMapAlignerBase::registerOptionsAndFlags_(const OpenMS::String&, ReferenceParameterKind)' 123 | void registerOptionsAndFlags_(const String& file_formats, | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:174:38: note: by 'OpenMS::MapAlignmentAlgorithmTreeGuided& OpenMS::MapAlignmentAlgorithmTreeGuided::operator=(const OpenMS::MapAlignmentAlgorithmTreeGuided&)' 174 | MapAlignmentAlgorithmTreeGuided& operator=(const MapAlignmentAlgorithmTreeGuided&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:72:46: note: by 'OpenMS::MapAlignmentAlgorithmSpectrumAlignment& OpenMS::MapAlignmentAlgorithmSpectrumAlignment::operator=(const OpenMS::MapAlignmentAlgorithmSpectrumAlignment&)' 72 | MapAlignmentAlgorithmSpectrumAlignment & operator=(const MapAlignmentAlgorithmSpectrumAlignment &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:64:23: note: by 'OpenMS::PoseClusteringShiftSuperimposer& OpenMS::PoseClusteringShiftSuperimposer::operator=(const OpenMS::PoseClusteringShiftSuperimposer&)' 64 | class OPENMS_DLLAPI PoseClusteringShiftSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp: In member function 'OpenMS::TransformationDescription::TransformationStatistics OpenMS::TransformationDescription::getStatistics() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:219:31: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 219 | if (data_.empty()) return s; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:260:12: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 260 | return s; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:82:27: note: by 'OpenMS::FeatureDeconvolution& OpenMS::FeatureDeconvolution::operator=(const OpenMS::FeatureDeconvolution&)' 82 | FeatureDeconvolution& operator=(const FeatureDeconvolution& source); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:82:37: note: by 'OpenMS::MetaboliteFeatureDeconvolution& OpenMS::MetaboliteFeatureDeconvolution::operator=(const OpenMS::MetaboliteFeatureDeconvolution&)' 82 | MetaboliteFeatureDeconvolution& operator=(const MetaboliteFeatureDeconvolution& source); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:34: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:58:23: note: by 'OpenMS::BasicProteinInferenceAlgorithm::operator=' 58 | class OPENMS_DLLAPI BasicProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:75:23: note: by 'OpenMS::BayesianProteinInferenceAlgorithm& OpenMS::BayesianProteinInferenceAlgorithm::operator=(const OpenMS::BayesianProteinInferenceAlgorithm&)' 75 | class OPENMS_DLLAPI BayesianProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:47:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 47 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: In member function 'long unsigned int OpenMS::BayesianProteinInferenceAlgorithm::GraphInferenceFunctor::operator()(OpenMS::Internal::IDBoostGraph::Graph&, unsigned int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Tensor.hpp:8, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/naive_convolve.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/p_convolve.hpp:11, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/PMF.hpp:5, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/LabeledPMF.hpp:7, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/InferenceEngine.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/BeliefPropagationInferenceEngine.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp:56, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: note: candidate 2: 'operator[](long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: note: candidate 2: 'operator[](long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: In member function 'long unsigned int OpenMS::BayesianProteinInferenceAlgorithm::ExtendedGraphInferenceFunctor::operator()(OpenMS::Internal::IDBoostGraph::Graph&, unsigned int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: note: candidate 2: 'operator[](long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: note: candidate 2: 'operator[](long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: note: candidate 2: 'operator[](long int* const, int)' (built-in) 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ In file included from /usr/include/string.h:535, from /usr/include/c++/13/cstring:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:42: In function 'void* memcpy(void*, const void*, size_t)', inlined from 'void evergreen::lsb_to_msb_with_existing_buffer(T*, T*) [with T = cpx; unsigned char NUM_BITS = 27]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/RecursiveShuffle.hpp:66:9: /usr/include/i386-linux-gnu/bits/string_fortified.h:29:33: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' pointer overflow between offset 1073741824 and size 1073741824 [-Warray-bounds=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:60:34: note: by 'OpenMS::ConsensusIDAlgorithmAverage& OpenMS::ConsensusIDAlgorithmAverage::operator=(const OpenMS::ConsensusIDAlgorithmAverage&)' 60 | ConsensusIDAlgorithmAverage& operator=(const ConsensusIDAlgorithmAverage&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:60:31: note: by 'OpenMS::ConsensusIDAlgorithmBest& OpenMS::ConsensusIDAlgorithmBest::operator=(const OpenMS::ConsensusIDAlgorithmBest&)' 60 | ConsensusIDAlgorithmBest& operator=(const ConsensusIDAlgorithmBest&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:66:34: note: by 'OpenMS::ConsensusIDAlgorithmPEPIons& OpenMS::ConsensusIDAlgorithmPEPIons::operator=(const OpenMS::ConsensusIDAlgorithmPEPIons&)' 66 | ConsensusIDAlgorithmPEPIons& operator=(const ConsensusIDAlgorithmPEPIons&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:181:36: note: by 'OpenMS::ConsensusIDAlgorithmPEPMatrix& OpenMS::ConsensusIDAlgorithmPEPMatrix::operator=(const OpenMS::ConsensusIDAlgorithmPEPMatrix&)' 181 | ConsensusIDAlgorithmPEPMatrix& operator=(const ConsensusIDAlgorithmPEPMatrix&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:66:32: note: by 'OpenMS::ConsensusIDAlgorithmRanks& OpenMS::ConsensusIDAlgorithmRanks::operator=(const OpenMS::ConsensusIDAlgorithmRanks&)' 66 | ConsensusIDAlgorithmRanks& operator=(const ConsensusIDAlgorithmRanks&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:60:32: note: by 'OpenMS::ConsensusIDAlgorithmWorst& OpenMS::ConsensusIDAlgorithmWorst::operator=(const OpenMS::ConsensusIDAlgorithmWorst&)' 60 | ConsensusIDAlgorithmWorst& operator=(const ConsensusIDAlgorithmWorst&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:63:23: note: by 'OpenMS::ConsensusMapMergerAlgorithm::operator=' 63 | class OPENMS_DLLAPI ConsensusMapMergerAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:73:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 73 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:73:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 73 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/stdexcept:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp:13, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:40: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:61:23: note: by 'OpenMS::IDMergerAlgorithm::operator=' 61 | class OPENMS_DLLAPI IDMergerAlgorithm: | ^~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:83:16: note: by 'OpenMS::IDRipper& OpenMS::IDRipper::operator=(const OpenMS::IDRipper&)' 83 | IDRipper & operator=(const IDRipper & rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:72:26: note: by 'OpenMS::IDDecoyProbability& OpenMS::IDDecoyProbability::operator=(const OpenMS::IDDecoyProbability&)' 72 | IDDecoyProbability & operator=(const IDDecoyProbability & rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:47:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 47 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:150:23: note: by 'OpenMS::MetaboliteSpectralMatching& OpenMS::MetaboliteSpectralMatching::operator=(const OpenMS::MetaboliteSpectralMatching&)' 150 | class OPENMS_DLLAPI MetaboliteSpectralMatching : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:89:31: note: by 'OpenMS::ProtonDistributionModel& OpenMS::ProtonDistributionModel::operator=(const OpenMS::ProtonDistributionModel&)' 89 | ProtonDistributionModel & operator=(const ProtonDistributionModel & pdm); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:46:21: note: by 'OpenMS::SimpleSearchEngineAlgorithm::operator=' 46 | class OPENMS_DLLAPI SimpleSearchEngineAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:55: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:56: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:57: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:58: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:70: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp: In member function 'OpenMS::SimpleSearchEngineAlgorithm::ExitCodes OpenMS::SimpleSearchEngineAlgorithm::search(const OpenMS::String&, const OpenMS::String&, std::vector&, std::vector&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:411:22: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 411 | f.getOptions() = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:60: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:495:26: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 495 | std::random_shuffle(fasta_db.begin(), fasta_db.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:602:27: warning: implicitly-declared 'constexpr OpenMS::StringView& OpenMS::StringView::operator=(const OpenMS::StringView&)' is deprecated [-Wdeprecated-copy] 602 | ah.sequence = c; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:504:5: note: because 'OpenMS::StringView' has user-provided 'OpenMS::StringView::StringView(const OpenMS::StringView&)' 504 | StringView(const StringView& s) : begin_(s.begin_), size_(s.size_) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h: In instantiation of 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/13/bits/stl_algo.h:1638:19: required from 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' /usr/include/c++/13/bits/stl_algo.h:1910:25: required from 'void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' /usr/include/c++/13/bits/stl_algo.h:4751:26: required from 'void std::partial_sort(_RAIter, _RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&, const OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&)]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:258:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:72:12: warning: implicitly-declared 'constexpr OpenMS::StringView& OpenMS::StringView::operator=(const OpenMS::StringView&)' is deprecated [-Wdeprecated-copy] 72 | struct AnnotatedHit_ | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:504:5: note: because 'OpenMS::StringView' has user-provided 'OpenMS::StringView::StringView(const OpenMS::StringView&)' 504 | StringView(const StringView& s) : begin_(s.begin_), size_(s.size_) | ^~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algo.h:61: /usr/include/c++/13/bits/stl_heap.h:263:17: note: synthesized method 'OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_& OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_::operator=(OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&&)' first required here 263 | *__result = _GLIBCXX_MOVE(*__first); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:46:23: note: by 'OpenMS::SiriusAdapterAlgorithm::operator=' 46 | class OPENMS_DLLAPI SiriusAdapterAlgorithm : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:70:23: note: by 'OpenMS::DeNovoAlgorithm& OpenMS::DeNovoAlgorithm::operator=(const OpenMS::DeNovoAlgorithm&)' 70 | DeNovoAlgorithm & operator=(const DeNovoAlgorithm & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:70:25: note: by 'OpenMS::DeNovoPostScoring& OpenMS::DeNovoPostScoring::operator=(const OpenMS::DeNovoPostScoring&)' 70 | DeNovoPostScoring & operator=(const DeNovoPostScoring & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:70:28: note: by 'OpenMS::DeNovoIdentification& OpenMS::DeNovoIdentification::operator=(const OpenMS::DeNovoIdentification&)' 70 | DeNovoIdentification & operator=(const DeNovoIdentification & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:73:33: note: by 'OpenMS::CompNovoIdentificationCID& OpenMS::CompNovoIdentificationCID::operator=(const OpenMS::CompNovoIdentificationCID&)' 73 | CompNovoIdentificationCID & operator=(const CompNovoIdentificationCID & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:73:30: note: by 'OpenMS::CompNovoIdentification& OpenMS::CompNovoIdentification::operator=(const OpenMS::CompNovoIdentification&)' 73 | CompNovoIdentification & operator=(const CompNovoIdentification & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:78:28: note: by 'OpenMS::MRMFragmentSelection& OpenMS::MRMFragmentSelection::operator=(const OpenMS::MRMFragmentSelection&)' 78 | MRMFragmentSelection & operator=(const MRMFragmentSelection & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:95:18: note: by 'OpenMS::MRMMapping& OpenMS::MRMMapping::operator=(const OpenMS::MRMMapping&)' 95 | MRMMapping & operator=(const MRMMapping & rhs); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:94:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 94 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:105:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 105 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:52:23: note: by 'OpenMS::PrecursorIonSelection& OpenMS::PrecursorIonSelection::operator=(const OpenMS::PrecursorIonSelection&)' 52 | class OPENMS_DLLAPI PrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:52:23: note: by 'OpenMS::InclusionExclusionList::operator=' 52 | class OPENMS_DLLAPI InclusionExclusionList : | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:113:23: note: by 'OpenMS::OpenPepXLAlgorithm& OpenMS::OpenPepXLAlgorithm::operator=(const OpenMS::OpenPepXLAlgorithm&)' 113 | class OPENMS_DLLAPI OpenPepXLAlgorithm : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:103:23: note: by 'OpenMS::OpenPepXLLFAlgorithm& OpenMS::OpenPepXLLFAlgorithm::operator=(const OpenMS::OpenPepXLLFAlgorithm&)' 103 | class OPENMS_DLLAPI OpenPepXLLFAlgorithm : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:65:23: note: by 'OpenMS::XFDRAlgorithm& OpenMS::XFDRAlgorithm::operator=(const OpenMS::XFDRAlgorithm&)' 65 | class OPENMS_DLLAPI XFDRAlgorithm : | ^~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:76:16: note: by 'OpenMS::BernNorm& OpenMS::BernNorm::operator=(const OpenMS::BernNorm&)' 76 | BernNorm & operator=(const BernNorm & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:71:24: note: by 'OpenMS::ComplementMarker& OpenMS::ComplementMarker::operator=(const OpenMS::ComplementMarker&)' 71 | ComplementMarker & operator=(const ComplementMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:77:21: note: by 'OpenMS::IsotopeMarker& OpenMS::IsotopeMarker::operator=(const OpenMS::IsotopeMarker&)' 77 | IsotopeMarker & operator=(const IsotopeMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:69:19: note: by 'OpenMS::MarkerMower& OpenMS::MarkerMower::operator=(const OpenMS::MarkerMower&)' 69 | MarkerMower & operator=(const MarkerMower & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:71:25: note: by 'OpenMS::NeutralLossMarker& OpenMS::NeutralLossMarker::operator=(const OpenMS::NeutralLossMarker&)' 71 | NeutralLossMarker & operator=(const NeutralLossMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:74:22: note: by 'OpenMS::ParentPeakMower& OpenMS::ParentPeakMower::operator=(const OpenMS::ParentPeakMower&)' 74 | ParentPeakMower& operator=(const ParentPeakMower& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:66:14: note: by 'OpenMS::Scaler& OpenMS::Scaler::operator=(const OpenMS::Scaler&)' 66 | Scaler & operator=(const Scaler & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:76:23: note: by 'OpenMS::ElutionPeakDetection& OpenMS::ElutionPeakDetection::operator=(const OpenMS::ElutionPeakDetection&)' 76 | class OPENMS_DLLAPI ElutionPeakDetection : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:177:23: note: by 'OpenMS::FeatureFindingMetabo& OpenMS::FeatureFindingMetabo::operator=(const OpenMS::FeatureFindingMetabo&)' 177 | class OPENMS_DLLAPI FeatureFindingMetabo : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:72:25: note: by 'OpenMS::MassTraceDetection& OpenMS::MassTraceDetection::operator=(const OpenMS::MassTraceDetection&)' 72 | class OPENMS_DLLAPI MassTraceDetection : | ^~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:192:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 192 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:38: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:192:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 192 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelLinear; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:105:22: required from 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, const OpenMS::Math::RANSACParam&) [with TModelType = OpenMS::Math::RansacModelLinear]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:205:61: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelQuadratic; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:105:22: required from 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, const OpenMS::Math::RANSACParam&) [with TModelType = OpenMS::Math::RansacModelQuadratic]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:250:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:66:23: note: by 'OpenMS::TOFCalibration& OpenMS::TOFCalibration::operator=(const OpenMS::TOFCalibration&)' 66 | class OPENMS_DLLAPI TOFCalibration : | ^~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:60:23: note: by 'OpenMS::LowessSmoothing& OpenMS::LowessSmoothing::operator=(const OpenMS::LowessSmoothing&)' 60 | class OPENMS_DLLAPI LowessSmoothing : | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian<>' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian<>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static std::map > OpenMS::IDFilter::extractUnassignedProteins(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:274:54: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 274 | moveMatchingItems(prot_it->getHits(), std::not1(acc_filter), target.first->second); | ~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:384:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 384 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::updateProteinReferences(std::vector&, const std::vector&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:432:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 432 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::removeUngroupedProteins(const std::vector&, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:498:59: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 498 | std::remove_if(hits.begin(), hits.end(), std::not1(HasMatchingAccessionUnordered(valid_accessions))), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::moveMatchingItems(Container&, const Predicate&, Container&) [with Container = std::vector; Predicate = std::unary_negate >]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:274:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:550:73: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = unary_negate >]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 550 | auto part = std::partition(items.begin(), items.end(), std::not1(pred)); | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccessionUnordered]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:311:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinPeptideLength]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:569:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinPeptideLength]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinCharge]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:592:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinCharge]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasRTInRange]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:611:22: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasRTInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMZInRange]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:619:22: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMZInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasLowMZError]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:630:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasLowMZError]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:647:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:650:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingModification]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:684:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingModification]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingSequence]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:714:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingSequence]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h: In instantiation of 'void OpenMS::IsotopeWaveletTransform::identifyCharge(const OpenMS::MSSpectrum&, const OpenMS::MSSpectrum&, OpenMS::UInt, OpenMS::UInt, double, bool) [with PeakType = OpenMS::Peak1D; OpenMS::UInt = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:224:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h:783:15: warning: implicitly-declared 'OpenMS::ConstRefVector::ConstRefVectorIterator& OpenMS::ConstRefVector::ConstRefVectorIterator::operator=(const OpenMS::ConstRefVector::ConstRefVectorIterator&)' is deprecated [-Wdeprecated-copy] 783 | for (iter = c_sorted_candidate.end() - 1; iter != c_sorted_candidate.begin(); --iter) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:260:7: note: because 'OpenMS::ConstRefVector::ConstRefVectorIterator' has user-provided 'OpenMS::ConstRefVector::ConstRefVectorIterator::ConstRefVectorIterator(const OpenMS::ConstRefVector::ConstRefVectorIterator&) [with ValueT = const OpenMS::Peak1D; ContainerT = OpenMS::MSSpectrum]' 260 | ConstRefVectorIterator(const ConstRefVectorIterator& it) : | ^~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderIdentificationAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderIdentificationAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp: In member function 'void OpenMS::FeatureFinderIdentificationAlgorithm::getRandomSample_(std::map&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:1309:19: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 1309 | random_shuffle(selection.begin(), selection.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:44: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderMultiplexAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderMultiplexAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/streambuf:43, from /usr/include/c++/13/bits/streambuf_iterator.h:35, from /usr/include/c++/13/iterator:66, from /usr/include/boost/iterator/iterator_traits.hpp:10, from /usr/include/boost/range/iterator_range_core.hpp:26, from /usr/include/boost/lexical_cast.hpp:48, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/distributions/cauchy.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/iomanip:42, from /usr/include/boost/math/policies/error_handling.hpp:12, from /usr/include/boost/math/special_functions/gamma.hpp:23, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h:40: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/iomanip:42, from /usr/include/boost/math/policies/error_handling.hpp:12, from /usr/include/boost/math/special_functions/acosh.hpp:20, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:103:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 103 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:164:53: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:164:53: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:75:83: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:75:83: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:119:10: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:119:10: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:96:23: note: by 'OpenMS::PeakPickerIterative& OpenMS::PeakPickerIterative::operator=(const OpenMS::PeakPickerIterative&)' 96 | class OPENMS_DLLAPI PeakPickerIterative : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:212:20: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:212:20: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:48:23: note: by 'OpenMS::PeakPickerSH& OpenMS::PeakPickerSH::operator=(const OpenMS::PeakPickerSH&)' 48 | class OPENMS_DLLAPI PeakPickerSH : | ^~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:45: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:52: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:103:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 103 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:44: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:80:32: note: by 'OpenMS::SpectraSTSimilarityScore& OpenMS::SpectraSTSimilarityScore::operator=(const OpenMS::SpectraSTSimilarityScore&)' 80 | SpectraSTSimilarityScore & operator=(const SpectraSTSimilarityScore & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/numeric:75, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:62:27: note: by 'virtual OpenMS::EGHFitter1D& OpenMS::EGHFitter1D::operator=(const OpenMS::EGHFitter1D&)' 62 | virtual EGHFitter1D & operator=(const EGHFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp: In member function 'void OpenMS::IonizationSimulation::ionize(OpenMS::SimTypes::FeatureMapSim&, OpenMS::ConsensusMap&, OpenMS::SimTypes::MSSimExperiment&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp:149:46: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 149 | charge_consensus.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:68:23: note: by 'OpenMS::MSSim& OpenMS::MSSim::operator=(const OpenMS::MSSim&)' 68 | class OPENMS_DLLAPI MSSim : | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:53:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 53 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:53:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 53 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp: In member function 'virtual void OpenMS::O18Labeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:219:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 219 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp: In member function 'virtual void OpenMS::SILACLabeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:439:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 439 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp: In member function 'virtual void OpenMS::ICPLLabeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:399:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 399 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Contaminants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Contaminants.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/FragmentMassError.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/FWHM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/MissedCleavages.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/MzCalibration.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/PeptideMass.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/RTAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/DBSuitability.h:66:23: note: by 'OpenMS::DBSuitability& OpenMS::DBSuitability::operator=(const OpenMS::DBSuitability&)' 66 | class OPENMS_DLLAPI DBSuitability: | ^~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/TIC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/numeric:75, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/numeric:61: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp: In member function 'void OpenMS::ConfidenceScoring::chooseDecoys_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:50:21: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator >; _Generator = boost::random::variate_generator&, boost::uniform_int<> >&]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 50 | random_shuffle(decoy_index_.begin(), decoy_index_.end(), rand_gen_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /usr/include/boost/multi_index_container.hpp:19, from /usr/include/boost/bimap/detail/bimap_core.hpp:34, from /usr/include/boost/bimap/bimap.hpp:61, from /usr/include/boost/bimap.hpp:13, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:40: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:327:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 327 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:64:23: note: by 'OpenMS::DiaPrescore::operator=' 64 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /usr/include/boost/math/special_functions/math_fwd.hpp:26, from /usr/include/boost/math/special_functions/fpclassify.hpp:18, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /usr/include/boost/math/special_functions/fpclassify.hpp:16: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:64:23: note: by 'OpenMS::DiaPrescore::operator=' 64 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:53:23: note: by 'OpenMS::MasstraceCorrelator& OpenMS::MasstraceCorrelator::operator=(const OpenMS::MasstraceCorrelator&)' 53 | class OPENMS_DLLAPI MasstraceCorrelator : | ^~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/boost/lexical_cast.hpp:26, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/special_functions/gamma.hpp:24, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:88:23: note: by 'OpenMS::MRMDecoy::operator=' 88 | class OPENMS_DLLAPI MRMDecoy : | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp: In member function 'void OpenMS::MRMDecoy::generateDecoys(const OpenMS::TargetedExperiment&, OpenMS::TargetedExperiment&, const OpenMS::String&, double, bool, const OpenMS::String&, int, double, double, double, double, const std::vector&, const std::vector&, bool, bool, int) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:401:26: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 401 | std::random_shuffle(item_list.begin(), item_list.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:44: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:62:23: note: by 'OpenMS::MRMFeatureFilter& OpenMS::MRMFeatureFilter::operator=(const OpenMS::MRMFeatureFilter&)' 62 | class OPENMS_DLLAPI MRMFeatureFilter : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMap(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::TargetedExperiment&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:208:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 208 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:208:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMapPercRSD(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::MRMFeatureQC&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:402:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 402 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:402:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:36: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelLinear; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:69:102: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:63: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:64: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:69:23: note: by 'OpenMS::TargetedSpectraExtractor& OpenMS::TargetedSpectraExtractor::operator=(const OpenMS::TargetedSpectraExtractor&)' 69 | class OPENMS_DLLAPI TargetedSpectraExtractor : | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:322:48: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:322:48: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:219:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 219 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ITransition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/INIUpdater.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: In static member function 'static OpenMS::Internal::ToolDescription OpenMS::ToolHandler::getExternalTools_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:321:12: warning: implicitly-declared 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' is deprecated [-Wdeprecated-copy] 321 | return tools_external_; | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:138:24: note: because 'OpenMS::Internal::ToolDescription' has user-provided 'OpenMS::Internal::ToolDescription& OpenMS::Internal::ToolDescription::operator=(const OpenMS::Internal::ToolDescription&)' 138 | ToolDescription& operator=(const ToolDescription& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In copy constructor 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: In static member function 'static OpenMS::Internal::ToolDescription OpenMS::ToolHandler::getExternalTools_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:321:12: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 321 | return tools_external_; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_vector.h:606:31: required from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/bits/stl_algo.h:69, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:37: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: In member function 'OpenMS::ParameterInformation OpenMS::TOPPBase::paramEntryToParameterInformation_(const OpenMS::Param::ParamEntry&, const OpenMS::String&, const OpenMS::String&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:796:12: warning: implicitly-declared 'OpenMS::ParameterInformation::ParameterInformation(const OpenMS::ParameterInformation&)' is deprecated [-Wdeprecated-copy] 796 | return param; | ^~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h:99:27: note: because 'OpenMS::ParameterInformation' has user-provided 'OpenMS::ParameterInformation& OpenMS::ParameterInformation::operator=(const OpenMS::ParameterInformation&)' 99 | ParameterInformation& operator=(const ParameterInformation& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: In member function 'bool OpenMS::TOPPBase::writeCTD_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:73: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:44: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:73: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:57: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ParameterInformation.cpp [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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Consolidate compiler generated dependencies of target OpenSwathAlgo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_autogen make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Automatic MOC for target OpenMS_GUI cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisTickCalculator.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/GUIProgressLoggerImpl.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerData.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/ExternalProcessMBox.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisPainter.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ColorSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/FilterList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/HistogramWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFile.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFileList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerData.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ListEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradient.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/OutputDirectory.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ParamEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectrumWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASEdge.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResource.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResources.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASScene.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/FilterList.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/InputFile.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Generating ui_TheoreticalSpectrumGenerationDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TheoreticalSpectrumGenerationDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.ui [ 81%] Generating qrc_resources.cpp cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/rcc --name resources --output /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/qrc_resources.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/resources.qrc [ 81%] Generating ui_DataFilterDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_DataFilterDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.ui [ 81%] Generating ui_FeatureEditDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_FeatureEditDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.ui [ 81%] Generating ui_FilterList.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_FilterList.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/FilterList.ui [ 83%] Generating ui_InputFile.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_InputFile.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.ui [ 83%] Generating ui_InputFileList.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_InputFileList.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFileList.ui [ 83%] Generating ui_LayerStatisticsDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_LayerStatisticsDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.ui [ 83%] Generating ui_OutputDirectory.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_OutputDirectory.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.ui [ 83%] Generating ui_ParamEditor.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_ParamEditor.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.ui [ 83%] Generating ui_PythonModuleRequirement.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_PythonModuleRequirement.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.ui [ 83%] Generating ui_PythonSelector.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_PythonSelector.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.ui [ 83%] Generating ui_Spectrum1DGoToDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum1DGoToDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.ui [ 83%] Generating ui_Spectrum1DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum1DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.ui [ 83%] Generating ui_Spectrum2DGoToDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum2DGoToDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.ui [ 84%] Generating ui_Spectrum2DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum2DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.ui [ 84%] Generating ui_Spectrum3DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum3DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.ui [ 84%] Generating ui_SpectrumAlignmentDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SpectrumAlignmentDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.ui [ 84%] Generating ui_SwathLibraryStats.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathLibraryStats.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SwathLibraryStats.ui [ 84%] Generating ui_SwathTabWidget.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathTabWidget.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.ui [ 84%] Generating ui_SwathWizardBase.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathWizardBase.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.ui [ 84%] Generating ui_TOPPASIOMappingDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASIOMappingDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.ui [ 84%] Generating ui_TOPPASInputFileDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASInputFileDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.ui [ 84%] Generating ui_TOPPASInputFilesDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASInputFilesDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.ui [ 84%] Generating ui_TOPPASOutputFilesDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASOutputFilesDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.ui [ 84%] Generating ui_TOPPASVertexNameDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASVertexNameDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.ui [ 84%] Generating ui_TOPPViewOpenDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPViewOpenDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.ui [ 84%] Generating ui_TOPPViewPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPViewPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.ui cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/OpenMS_GUI_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In constructor 'OpenMS::TOPPViewBase::TOPPViewBase(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:148:68: warning: 'const QRect QDesktopWidget::screenGeometry(int) const' is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 148 | QRect screen_geometry = QApplication::desktop()->screenGeometry(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:58, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:79:67: note: declared here 79 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect screenGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:86: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:322:38: note: in expansion of macro 'CONNECTCAST' 322 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:27: /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:322:38: note: in expansion of macro 'CONNECTCAST' 322 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:357:29: note: in expansion of macro 'CONNECTCAST' 357 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:357:29: note: in expansion of macro 'CONNECTCAST' 357 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::runTOPPTool_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:2457:24: warning: 'int QTime::restart()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 2457 | topp_.timer.restart(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/FilterList.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:46: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:236:54: note: declared here 236 | QT_DEPRECATED_X("Use QElapsedTimer instead") int restart(); | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::finishTOPPToolExecution(int, QProcess::ExitStatus)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:2493:79: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 2493 | QString("Execution time: %1 ms").arg(topp_.timer.elapsed())); | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In static member function 'static OpenMS::TOPPASTreeView* OpenMS::TOPPASBase::createTOPPToolsTreeWidget(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:482:52: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 482 | QStringList category_list = category_set.toList(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemview.h:46, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreeview.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTreeWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:40: /usr/include/i386-linux-gnu/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:483:10: warning: 'void qSort(Container&) [with Container = QStringList]' is deprecated: Use std::sort [-Wdeprecated-declarations] 483 | qSort(category_list); | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:49, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qwidget.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qframe.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemview.h:44: /usr/include/i386-linux-gnu/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In member function 'void OpenMS::TOPPASBase::openFilesInTOPPView(QStringList)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:66: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ 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-fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp: In member function 'virtual void OpenMS::Annotation1DPeakItem::draw(OpenMS::Spectrum1DCanvas*, QPainter&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:47, from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:36: /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp: In member function 'virtual void OpenMS::Annotation1DCaret::draw(OpenMS::Spectrum1DCanvas*, QPainter&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:47, from /usr/include/i386-linux-gnu/qt5/QtGui/qtransform.h:43, from /usr/include/i386-linux-gnu/qt5/QtGui/qstatictext.h:48, from /usr/include/i386-linux-gnu/qt5/QtGui/QStaticText:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisPainter.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisWidget.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/FilterList.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/HistogramWidget.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp: In constructor 'OpenMS::InputFile::InputFile(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp:57:48: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 57 | completer->setModel(new QDirModel(completer)); | ^ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp:44: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFileList.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp: In member function 'void OpenMS::LayerData::updatePeptideHitAnnotations_(OpenMS::PeptideHit&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:42: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp: In member function 'void OpenMS::Internal::ListTable::createNewRow()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp:332:22: warning: 'void QListWidget::setItemSelected(const QListWidgetItem*, bool)' is deprecated: Use QListWidgetItem::setSelected() instead [-Wdeprecated-declarations] 332 | setItemSelected(item, true); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QListWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qlistwidget.h:263:10: note: declared here 263 | void setItemSelected(const QListWidgetItem *item, bool select); | ^~~~~~~~~~~~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradient.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp: In constructor 'OpenMS::OutputDirectory::OutputDirectory(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp:56:51: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 56 | QDirModel* dir_model = new QDirModel(completer); | ^ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp:45: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'bool OpenMS::Internal::ParamEditorDelegate::exists_(QString, QModelIndex) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:369:34: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 369 | while (index.parent().child(current_index, 0).isValid()) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/qstyleoption.h:66, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemdelegate.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qitemdelegate.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QItemDelegate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:374:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 374 | index.parent().child(current_index, 0).data(Qt::DisplayRole).toString() == name | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:377:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 377 | (index.data(Qt::UserRole).toInt() == 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() == 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:379:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 379 | (index.data(Qt::UserRole).toInt() != 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() != 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'void OpenMS::ParamEditor::load(OpenMS::Param&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:503:29: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 503 | item->setTextColor(0, Qt::darkGray); // color of nodes with children | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTreeWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:44: /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:535:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 535 | item->setTextColor(0, QColor(255, 140, 0, 255)); // orange | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:536:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 536 | item->setTextColor(2, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:537:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 537 | item->setTextColor(3, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:541:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 541 | item->setTextColor(0, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:542:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 542 | item->setTextColor(2, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:543:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 543 | item->setTextColor(3, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::updateEntries()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:543:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 543 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:272, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:544:29: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 544 | item->setTextColor(Qt::blue); // draw precursor information in blue | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:565:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 565 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:571:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 571 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:670:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 670 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:671:33: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 671 | item->setTextColor(Qt::blue); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:701:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 701 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:702:33: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 702 | item->setTextColor(Qt::blue); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:722:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 722 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:728:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 728 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:755:41: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 755 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addTextItemToBottomRow_(const QString&, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:974:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 974 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addIntItemToBottomRow_(OpenMS::Int, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:982:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 982 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addDoubleItemToBottomRow_(double, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:990:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 990 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addCheckboxItemToBottomRow_(bool, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:1005:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 1005 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp: In member function 'void OpenMS::SpectraViewWidget::updateEntries(const OpenMS::LayerData&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:767:21: warning: 'constexpr QFlags::QFlags(Zero) [with Enum = Qt::ItemFlag; Zero = int QFlags::Private::*]' is deprecated: Use default constructor instead [-Wdeprecated-declarations] 767 | item->setFlags(nullptr); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qglobal.h:1305, from /usr/include/i386-linux-gnu/qt5/QtCore/QtCore:4, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:3, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qflags.h:123:80: note: declared here 123 | QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:773:21: warning: 'constexpr QFlags::QFlags(Zero) [with Enum = Qt::ItemFlag; Zero = int QFlags::Private::*]' is deprecated: Use default constructor instead [-Wdeprecated-declarations] 773 | item->setFlags(nullptr); | ~~~~~~~~~~~~~~^~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qflags.h:123:80: note: declared here 123 | QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} | ^~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp: In member function 'void OpenMS::Spectrum1DCanvas::paint(QPainter*, QPaintEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:700:36: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 700 | if (show_timing_) { timer.start(); } | ~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QTime:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:40: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:934:51: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 934 | cout << "paint event took " << timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp: In member function 'virtual void OpenMS::Spectrum1DWidget::saveAsImage()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp:369:43: warning: 'static QPixmap QPixmap::grabWidget(QObject*, int, int, int, int)' is deprecated: Use QWidget::grab() instead [-Wdeprecated-declarations] 369 | QPixmap pixmap = QPixmap::grabWidget(this); | ~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:122:20: note: declared here 122 | static QPixmap grabWidget(QObject *widget, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp: In member function 'virtual void OpenMS::Spectrum2DCanvas::paintEvent(QPaintEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1540:26: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1540 | overall_timer.start(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:36: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1568:28: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1568 | layer_timer.start(); | ~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1612:71: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1612 | cout << " -layer " << i << " time: " << layer_timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1622:45: warning: 'QVector QRegion::rects() const' is deprecated: Use begin()/end() instead [-Wdeprecated-declarations] 1622 | QVector rects = e->region().rects(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47: /usr/include/i386-linux-gnu/qt5/QtGui/qregion.h:125:20: note: declared here 125 | QVector rects() const; | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1720:59: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1720 | cout << " -overall time: " << overall_timer.elapsed() << " ms" << endl << endl; | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: In member function 'virtual void OpenMS::SpectrumCanvas::wheelEvent(QWheelEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:15: warning: 'int QWheelEvent::x() const' is deprecated: Use position() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qtextlayout.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qabstracttextdocumentlayout.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QtGui:5, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:3, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:48, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:229:16: note: declared here 229 | inline int x() const { return int(p.x()); } | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:23: warning: 'int QWheelEvent::y() const' is deprecated: Use position() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:231:16: note: declared here 231 | inline int y() const { return int(p.y()); } | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:35: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: In member function 'void OpenMS::SpectrumCanvas::drawText_(QPainter&, QStringList)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:1025:43: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1025 | width = max(width, 4 + metrics.width(text[i])); | ~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QtGui:26: /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp: In member function 'virtual void OpenMS::SpectrumWidget::saveAsImage()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp:232:41: warning: 'static QPixmap QPixmap::grabWidget(QObject*, int, int, int, int)' is deprecated: Use QWidget::grab() instead [-Wdeprecated-declarations] 232 | QPixmap pixmap = QPixmap::grabWidget(this); | ~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:122:20: note: declared here 122 | static QPixmap grabWidget(QObject *widget, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp: In member function 'virtual void OpenMS::TOPPASEdge::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:215:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 215 | int text_width=fm.width(str); | ~~~~~~~~^~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qpainter.h:59, from /usr/include/i386-linux-gnu/qt5/QtGui/QPainter:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:235:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 235 | int text_width = fm.width(str); | ~~~~~~~~^~~~~ /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResource.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResources.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp: In member function 'virtual void OpenMS::TOPPASScene::contextMenuEvent(QGraphicsSceneContextMenuEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp:1833:70: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 1833 | QList supported_actions = supported_actions_set.toList(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/qgraphicssceneevent.h:49, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QGraphicsSceneMouseEvent:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:79, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'void OpenMS::TOPPASToolVertex::getParameters_(QVector&, bool) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:326:10: warning: 'void qSort(Container&) [with Container = QVector]' is deprecated: Use std::sort [-Wdeprecated-declarations] 326 | qSort(io_infos); | ~~~~~^~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/i386-linux-gnu/qt5/QtCore/qstringlist.h:41, from /usr/include/i386-linux-gnu/qt5/QtGui/qcolor.h:46, from /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/qpainter.h:48, from /usr/include/i386-linux-gnu/qt5/QtGui/QPainter:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'QString OpenMS::TOPPASToolVertex::toolnameWithWhitespacesForFancyWordWrapping_(QPainter*, const QString&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qhashfunctions.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:47: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:34: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'void OpenMS::TOPPASVertex::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:209:39: warning: 'void QPainterPath::addRoundRect(const QRectF&, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 209 | if (round_shape) path.addRoundRect(boundingRect().marginsRemoved(QMarginsF(1, 1, 1, 1)), 20); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QPainterPath:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:78, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:35: /usr/include/i386-linux-gnu/qt5/QtGui/qpainterpath.h:152:10: note: declared here 152 | void addRoundRect(const QRectF &rect, int roundness); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'virtual QPainterPath OpenMS::TOPPASVertex::shape() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:230:23: warning: 'void QPainterPath::addRoundRect(const QRectF&, int, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 230 | shape.addRoundRect(boundingRect(), 20, 20); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtGui/qpainterpath.h:147:10: note: declared here 147 | void addRoundRect(const QRectF &rect, int xRnd, int yRnd); | ^~~~~~~~~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp: In member function 'virtual void OpenMS::TOPPASWidget::wheelEvent(QWheelEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:101:22: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 101 | zoom(event->delta() < 0); | ~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QDragEnterEvent:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:44: /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp: In member function 'void OpenMS::TOPPViewIdentificationViewBehavior::addPeakAnnotationsFromID_(const OpenMS::PeptideHit&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qwidget.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtabbar.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTabBar:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:50: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/qrc_resources.cpp [ 98%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenMS_GUI.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS_GUI.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenMS_GUI.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS_GUI.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenMS_GUI make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target TOPPView cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView_autogen make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPView_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -MF CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d -o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp [ 98%] Linking CXX executable ../../bin/TOPPView cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPView.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -o ../../bin/TOPPView ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target INIFileEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor_autogen make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/INIFileEditor_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -MF CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d -o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp [ 98%] Linking CXX executable ../../bin/INIFileEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFileEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -o ../../bin/INIFileEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target SwathWizard cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard_autogen make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/SwathWizard_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -MF CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d -o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp [ 98%] Linking CXX executable ../../bin/SwathWizard cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/SwathWizard.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -o ../../bin/SwathWizard ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPAS_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target TOPPAS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPAS_autogen make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPAS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -MF CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d -o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp [100%] Linking CXX executable ../../bin/TOPPAS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPAS.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -o ../../bin/TOPPAS ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPPAS make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target GUI make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f CMakeFiles/Makefile2 TOPP make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 81 make -f CMakeFiles/Makefile2 src/topp/CMakeFiles/TOPP.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/OpenMS_GUI_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI_autogen make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target OpenMS_GUI make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp 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-isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o -MF CMakeFiles/Resampler.dir/Resampler.cpp.o.d -o CMakeFiles/Resampler.dir/Resampler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp [ 79%] Linking CXX executable ../../bin/Resampler cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Resampler.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Resampler.dir/Resampler.cpp.o -o ../../bin/Resampler ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so 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/usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target Resampler make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu 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/usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Building CXX object src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -MF CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d -o CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp [ 80%] Linking CXX executable ../../bin/CometAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CometAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -o ../../bin/CometAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o -MF CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d -o CMakeFiles/CompNovo.dir/CompNovo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp [ 80%] Linking CXX executable ../../bin/CompNovo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -MF CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d -o CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp [ 80%] Linking CXX executable ../../bin/CompNovoCID cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -MF CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d -o CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp [ 80%] Linking CXX executable ../../bin/ConsensusID cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusID.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -o ../../bin/ConsensusID ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -MF CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d -o CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp [ 80%] Linking CXX executable ../../bin/ConsensusMapNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -MF CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d -o CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp [ 80%] Linking CXX executable ../../bin/CruxAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CruxAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -o ../../bin/CruxAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -MF CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d -o CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp [ 80%] Linking CXX executable ../../bin/DatabaseSuitability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseSuitability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -o ../../bin/DatabaseSuitability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o -MF CMakeFiles/Decharger.dir/Decharger.cpp.o.d -o CMakeFiles/Decharger.dir/Decharger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp [ 80%] Linking CXX executable ../../bin/Decharger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Decharger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/Decharger.dir/Decharger.cpp.o -o ../../bin/Decharger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -MF CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d -o CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp [ 80%] Linking CXX executable ../../bin/DTAExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTAExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -o ../../bin/DTAExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -MF CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d -o CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp [ 80%] Linking CXX executable ../../bin/EICExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/EICExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -o ../../bin/EICExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -MF CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d -o CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp [ 80%] Linking CXX executable ../../bin/ExternalCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExternalCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -o ../../bin/ExternalCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -MF CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp [ 80%] Linking CXX executable ../../bin/FalseDiscoveryRate cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FalseDiscoveryRate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -o ../../bin/FalseDiscoveryRate ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -MF CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d -o CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderCentroided cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -MF CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d -o CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderIdentification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -MF CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d -o CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderIsotopeWavelet cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -o ../../bin/FeatureFinderIsotopeWavelet ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -MF CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d -o CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMetabo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -MF CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d -o CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMRM cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMRM.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -o ../../bin/FeatureFinderMRM ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -MF CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d -o CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMultiplex cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -MF CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d -o CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerLabeled cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerLabeled.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -o ../../bin/FeatureLinkerLabeled ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerUnlabeled cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeled.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -o ../../bin/FeatureLinkerUnlabeled ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledKD cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -o ../../bin/FeatureLinkerUnlabeledKD ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp [ 81%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledQT cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -o ../../bin/FeatureLinkerUnlabeledQT ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Building CXX object src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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-fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o -MF CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d -o CMakeFiles/FileConverter.dir/FileConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp [ 81%] Linking CXX executable ../../bin/FileConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileConverter.dir/FileConverter.cpp.o -o ../../bin/FileConverter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d -o CMakeFiles/FileFilter.dir/FileFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp [ 81%] Linking CXX executable ../../bin/FileFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o -MF CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d -o CMakeFiles/FileMerger.dir/FileMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp [ 81%] Linking CXX executable ../../bin/FileMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileMerger.dir/FileMerger.cpp.o -o ../../bin/FileMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -MF CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d -o CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:212:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 212 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPGenericWrapper::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:497:18: warning: 'void QProcess::start(const QString&, QIODevice::OpenMode)' is deprecated: Use QProcess::start(const QString &program, const QStringList &arguments,OpenMode mode = ReadWrite) instead [-Wdeprecated-declarations] 497 | builder.start(call.toQString()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QProcess:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:48: /usr/include/i386-linux-gnu/qt5/QtCore/qprocess.h:168:10: note: declared here 168 | void start(const QString &command, OpenMode mode = ReadWrite); | ^~~~~ [ 81%] Linking CXX executable ../../bin/GenericWrapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericWrapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -o ../../bin/GenericWrapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -MF CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d -o CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp [ 82%] Linking CXX executable ../../bin/GNPSExport cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GNPSExport.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -o ../../bin/GNPSExport ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -MF CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d -o CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp [ 82%] Linking CXX executable ../../bin/HighResPrecursorMassCorrector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/HighResPrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -o ../../bin/HighResPrecursorMassCorrector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -MF CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d -o CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp [ 82%] Linking CXX executable ../../bin/IDConflictResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDConflictResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -o ../../bin/IDConflictResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make 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/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o -MF CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d -o CMakeFiles/IDMapper.dir/IDMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp [ 83%] Linking CXX executable ../../bin/IDMapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDMapper.dir/IDMapper.cpp.o -o ../../bin/IDMapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o -MF CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d -o CMakeFiles/IDMerger.dir/IDMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp [ 83%] Linking CXX executable ../../bin/IDMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDMerger.dir/IDMerger.cpp.o -o ../../bin/IDMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -MF CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d -o CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp [ 83%] Linking CXX executable ../../bin/IDPosteriorErrorProbability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDPosteriorErrorProbability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -o ../../bin/IDPosteriorErrorProbability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o -MF CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d -o CMakeFiles/IDRipper.dir/IDRipper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp [ 85%] Linking CXX executable ../../bin/IDRipper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRipper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDRipper.dir/IDRipper.cpp.o -o ../../bin/IDRipper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -MF CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d -o CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp [ 85%] Linking CXX executable ../../bin/IDRTCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRTCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -o ../../bin/IDRTCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -MF CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d -o CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp [ 85%] Linking CXX executable ../../bin/InclusionExclusionListCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -MF CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o.d -o CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPInspectAdapter::main_(OpenMS::Int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:117: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:117: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 85%] Linking CXX executable ../../bin/InspectAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InspectAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -o ../../bin/InspectAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -MF CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d -o CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp [ 85%] Linking CXX executable ../../bin/InternalCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InternalCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -o ../../bin/InternalCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -MF CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d -o CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp [ 85%] Linking CXX executable ../../bin/IsobaricAnalyzer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsobaricAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -o ../../bin/IsobaricAnalyzer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -MF CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d -o CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp [ 85%] Linking CXX executable ../../bin/LuciphorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/LuciphorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -o ../../bin/LuciphorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -MF CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d -o CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerIdentification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerIdentification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -o ../../bin/MapAlignerIdentification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -MF CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d -o CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerPoseClustering cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerPoseClustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -o ../../bin/MapAlignerPoseClustering ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -MF CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d -o CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerSpectrum cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerSpectrum.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -o ../../bin/MapAlignerSpectrum ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -MF CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d -o CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerTreeGuided cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerTreeGuided.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -o ../../bin/MapAlignerTreeGuided ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -MF CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d -o CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp [ 85%] Linking CXX executable ../../bin/MapNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -o ../../bin/MapNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -MF CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d -o CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp [ 86%] Linking CXX executable ../../bin/MapRTTransformer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapRTTransformer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -o ../../bin/MapRTTransformer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -MF CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d -o CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp [ 86%] Linking CXX executable ../../bin/MapStatistics cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -o ../../bin/MapStatistics ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -MF CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d -o CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp [ 86%] Linking CXX executable ../../bin/MaRaClusterAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaRaClusterAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -o ../../bin/MaRaClusterAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -MF CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d -o CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPMascotAdapter::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp:576:28: warning: 'static int QProcess::execute(const QString&)' is deprecated: Use QProcess::execute(const QString &program, const QStringList &arguments) instead [-Wdeprecated-declarations] 576 | status = qp.execute(call.toQString()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QProcess:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp:53: /usr/include/i386-linux-gnu/qt5/QtCore/qprocess.h:265:16: note: declared here 265 | static int execute(const QString &command); | ^~~~~~~ [ 86%] Linking CXX executable ../../bin/MascotAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -o ../../bin/MascotAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -MF CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d -o CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp [ 86%] Linking CXX executable ../../bin/MascotAdapterOnline cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -MF CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d -o CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp [ 86%] Linking CXX executable ../../bin/MassTraceExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassTraceExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -o ../../bin/MassTraceExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -MF CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d -o CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp [ 87%] Linking CXX executable ../../bin/MRMMapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -MF CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d -o CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp [ 87%] Linking CXX executable ../../bin/MSGFPlusAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSGFPlusAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -o ../../bin/MSGFPlusAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -MF CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d -o CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp [ 87%] Linking CXX executable ../../bin/MyriMatchAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyriMatchAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -o ../../bin/MyriMatchAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -MF CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d -o CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp [ 87%] Linking CXX executable ../../bin/MzTabExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -MF CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d -o CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp [ 88%] Linking CXX executable ../../bin/NoiseFilterGaussian cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterGaussian.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -o ../../bin/NoiseFilterGaussian ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -MF CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d -o CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp [ 88%] Linking CXX executable ../../bin/NoiseFilterSGolay cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterSGolay.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -o ../../bin/NoiseFilterSGolay ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -MF CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d -o CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp [ 88%] Linking CXX executable ../../bin/OMSSAAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OMSSAAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -o ../../bin/OMSSAAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -MF CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d -o CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp [ 88%] Linking CXX executable ../../bin/OpenPepXL cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXL.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -o ../../bin/OpenPepXL ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -MF CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d -o CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp [ 88%] Linking CXX executable ../../bin/OpenPepXLLF cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXLLF.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -o ../../bin/OpenPepXLLF ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -MF CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d -o CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp [ 88%] Linking CXX executable ../../bin/OpenSwathAnalyzer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -o ../../bin/OpenSwathAnalyzer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -MF CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d -o CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp In file included from /usr/include/boost/lexical_cast.hpp:26, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/special_functions/gamma.hpp:24, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../bin/OpenSwathAssayGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAssayGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -o ../../bin/OpenSwathAssayGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -MF CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathChromatogramExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathChromatogramExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -o ../../bin/OpenSwathChromatogramExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -MF CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d -o CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathConfidenceScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathConfidenceScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -o ../../bin/OpenSwathConfidenceScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -MF CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d -o CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathDecoyGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDecoyGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -o ../../bin/OpenSwathDecoyGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -MF CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d -o CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathFeatureXMLToTSV cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -o ../../bin/OpenSwathFeatureXMLToTSV ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Building CXX object src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -MF CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d -o CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp [ 91%] Linking CXX executable ../../bin/OpenSwathRTNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRTNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -o ../../bin/OpenSwathRTNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Building CXX object src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -MF CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d -o CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp [ 92%] Linking CXX executable ../../bin/PeakPickerHiRes cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerHiRes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -o ../../bin/PeakPickerHiRes ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -MF CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d -o CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp [ 92%] Linking CXX executable ../../bin/PeakPickerWavelet cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerWavelet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -o ../../bin/PeakPickerWavelet ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -MF CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d -o CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp [ 92%] Linking CXX executable ../../bin/PepNovoAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PepNovoAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -o ../../bin/PepNovoAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -MF CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d -o CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp:37: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp:35: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 92%] Linking CXX executable ../../bin/PeptideIndexer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideIndexer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -o ../../bin/PeptideIndexer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -MF CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d -o CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp [ 92%] Linking CXX executable ../../bin/PercolatorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PercolatorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -o ../../bin/PercolatorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -MF CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d -o CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp [ 92%] Linking CXX executable ../../bin/PhosphoScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PhosphoScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -o ../../bin/PhosphoScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -MF CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d -o CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp [ 93%] Linking CXX executable ../../bin/PrecursorIonSelector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorIonSelector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -o ../../bin/PrecursorIonSelector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -MF CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d -o CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp [ 93%] Linking CXX executable ../../bin/PrecursorMassCorrector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -o ../../bin/PrecursorMassCorrector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -MF CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d -o CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp [ 93%] Linking CXX executable ../../bin/ProteinInference cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinInference.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -o ../../bin/ProteinInference ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -MF CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d -o CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp: In member function 'void TOPPProteinQuantifier::writeProteinTable_(OpenMS::SVOutStream&, const ProteinQuant&, const OpenMS::ExperimentalDesign&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp:566:47: warning: variable 'file_it' set but not used [-Wunused-but-set-variable] 566 | ConsensusMap::ColumnHeaders::iterator file_it = columns_headers_.begin(); | ^~~~~~~ [ 93%] Linking CXX executable ../../bin/ProteinQuantifier cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinQuantifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -o ../../bin/ProteinQuantifier ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -MF CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d -o CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp [ 93%] Linking CXX executable ../../bin/ProteinResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -o ../../bin/ProteinResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o -MF CMakeFiles/PTModel.dir/PTModel.cpp.o.d -o CMakeFiles/PTModel.dir/PTModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPPTModel::main_(OpenMS::Int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:456:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 456 | random_shuffle(training_peptides.begin(), training_peptides.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:503:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 503 | random_shuffle(temp_training_peptides.begin(), temp_training_peptides.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../bin/PTModel cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PTModel.dir/PTModel.cpp.o -o ../../bin/PTModel ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PTPredict.dir/PTPredict.cpp.o -o ../../bin/PTPredict ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o -MF CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d -o CMakeFiles/QualityControl.dir/QualityControl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp [ 95%] Linking CXX executable ../../bin/QualityControl cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/QualityControl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/QualityControl.dir/QualityControl.cpp.o -o ../../bin/QualityControl ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o -MF CMakeFiles/RTModel.dir/RTModel.cpp.o.d -o CMakeFiles/RTModel.dir/RTModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp [ 95%] Linking CXX executable ../../bin/RTModel cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/RTModel.dir/RTModel.cpp.o -o ../../bin/RTModel ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/RTPredict.dir/RTPredict.cpp.o -o ../../bin/RTPredict ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -MF CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d -o CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp [ 96%] Linking CXX executable ../../bin/SeedListGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeedListGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -o ../../bin/SeedListGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so 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src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -MF CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d -o CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp [ 96%] Linking CXX executable ../../bin/SpecLibSearcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibSearcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -o ../../bin/SpecLibSearcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -MF CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d -o CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterBernNorm cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterBernNorm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -o ../../bin/SpectraFilterBernNorm ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -MF CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d -o CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterMarkerMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterMarkerMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -o ../../bin/SpectraFilterMarkerMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -MF CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d -o CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterNLargest cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -MF CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d -o CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -o ../../bin/SpectraFilterNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -MF CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d -o CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -MF CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d -o CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterScaler cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterScaler.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -o ../../bin/SpectraFilterScaler ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -MF CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d -o CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterSqrtMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterSqrtMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -o ../../bin/SpectraFilterSqrtMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -MF CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d -o CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterThresholdMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterThresholdMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -o ../../bin/SpectraFilterThresholdMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -MF CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d -o CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterWindowMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterWindowMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -o ../../bin/SpectraFilterWindowMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -MF CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d -o CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp [ 97%] Linking CXX executable ../../bin/SpectraMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -o ../../bin/SpectraMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o -MF CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d -o CMakeFiles/TextExporter.dir/TextExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp [ 98%] Linking CXX executable ../../bin/TextExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TextExporter.dir/TextExporter.cpp.o -o ../../bin/TextExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -MF CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d -o CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp [ 98%] Linking CXX executable ../../bin/TOFCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOFCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -o ../../bin/TOFCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -MF CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d -o CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp [100%] Linking CXX executable ../../bin/XTandemAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -o ../../bin/XTandemAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -MF CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d -o CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp [100%] Linking CXX executable ../../bin/ExecutePipeline cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExecutePipeline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -o ../../bin/ExecutePipeline ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ExecutePipeline make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPP make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f CMakeFiles/Makefile2 UTILS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 76 make -f CMakeFiles/Makefile2 src/utils/CMakeFiles/UTILS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target OpenMS_GUI make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -MF CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d -o CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp [ 84%] Linking CXX executable ../../bin/INIUpdater cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIUpdater.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -o ../../bin/INIUpdater ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target INIUpdater make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -MF CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d -o CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp [ 84%] Linking CXX executable ../../bin/AccurateMassSearch cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AccurateMassSearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -o ../../bin/AccurateMassSearch ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -MF CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d -o CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 84%] Linking CXX executable ../../bin/AssayGeneratorMetabo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssayGeneratorMetabo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -o ../../bin/AssayGeneratorMetabo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -MF CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d -o CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp [ 84%] Linking CXX executable ../../bin/ClusterMassTraces cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTraces.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -o ../../bin/ClusterMassTraces ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -MF CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d -o CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp [ 84%] Linking CXX executable ../../bin/ClusterMassTracesByPrecursor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTracesByPrecursor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -o ../../bin/ClusterMassTracesByPrecursor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o -MF CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d -o CMakeFiles/CVInspector.dir/CVInspector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp [ 84%] Linking CXX executable ../../bin/CVInspector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/CVInspector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/CVInspector.dir/CVInspector.cpp.o -o ../../bin/CVInspector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -MF CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d -o CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp [ 85%] Linking CXX executable ../../bin/DatabaseFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -o ../../bin/DatabaseFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -MF CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d -o CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPDecoyDatabase::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp:250:27: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 250 | random_shuffle(tokenized.begin(), tokenized.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:67, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 85%] Linking CXX executable ../../bin/DecoyDatabase cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DecoyDatabase.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -o ../../bin/DecoyDatabase ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -MF CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d -o CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp [ 85%] Linking CXX executable ../../bin/DeMeanderize cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeMeanderize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -o ../../bin/DeMeanderize ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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/usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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Linking CXX executable ../../bin/DigestorMotif cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigestorMotif.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -o ../../bin/DigestorMotif ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o -MF CMakeFiles/Epifany.dir/Epifany.cpp.o.d -o CMakeFiles/Epifany.dir/Epifany.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp [ 86%] Linking CXX executable ../../bin/Epifany cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Epifany.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Epifany.dir/Epifany.cpp.o -o ../../bin/Epifany ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -MF CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d -o CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp [ 86%] Linking CXX executable ../../bin/ERPairFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ERPairFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -MF CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d -o CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp [ 88%] Linking CXX executable ../../bin/FeatureFinderMetaboIdent cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetaboIdent.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -o ../../bin/FeatureFinderMetaboIdent ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FeatureFinderMetaboIdent make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp [ 90%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp [ 90%] Linking CXX shared library ../../lib/i386-linux-gnu/libSuperHirn.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/cmake -E cmake_link_script CMakeFiles/SuperHirn.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libSuperHirn.so.2.6.0 -o ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 ../../lib/i386-linux-gnu/libSuperHirn.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target SuperHirn make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -MF CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o.d -o CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp [ 90%] Linking CXX executable ../../bin/FeatureFinderSuperHirn cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderSuperHirn.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -o ../../bin/FeatureFinderSuperHirn /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp [ 92%] Linking CXX executable ../../bin/FFEval cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFEval.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FFEval.dir/FFEval.cpp.o -o ../../bin/FFEval ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so 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/usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp [ 92%] Linking CXX executable ../../bin/IDDecoyProbability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDDecoyProbability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -o ../../bin/IDDecoyProbability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -MF CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d -o CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPIDExtractor::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp:192:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 192 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:67, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 92%] Linking CXX executable ../../bin/IDExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -o ../../bin/IDExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -MF CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d -o CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp [ 92%] Linking CXX executable ../../bin/IDMassAccuracy cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMassAccuracy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -o ../../bin/IDMassAccuracy ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -MF CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d -o CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp [ 92%] Linking CXX executable ../../bin/IDScoreSwitcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDScoreSwitcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -o ../../bin/IDScoreSwitcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils 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/build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -MF CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d -o CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp [ 92%] Linking CXX executable ../../bin/IDSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[5]: Leaving directory 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/usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -MF CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d -o CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp [ 92%] Linking CXX executable ../../bin/LabeledEval cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabeledEval.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -MF CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d -o CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp [ 92%] Linking CXX executable ../../bin/MassCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -o ../../bin/MassCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -MF CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d -o CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp [ 93%] Linking CXX executable ../../bin/MetaboliteAdductDecharger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteAdductDecharger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -o ../../bin/MetaboliteAdductDecharger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -MF CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d -o CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp [ 93%] Linking CXX executable ../../bin/MetaboliteSpectralMatcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteSpectralMatcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -o ../../bin/MetaboliteSpectralMatcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -MF CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d -o CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:195:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 195 | public std::binary_function, vector, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:205:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | public std::binary_function, pair, bool> | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:215:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 215 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(double) [with _CharT = char; _Traits = std::char_traits]', inlined from 'MapRateToScoreType MetaProSIP::normalizeToMax(const MapRateToScoreType&)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:2480:52, inlined from 'virtual OpenMS::TOPPBase::ExitCodes MetaProSIP::main_(int, const char**)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:3529:105: /usr/include/c++/13/ostream:223:25: warning: 'best_rate' may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes MetaProSIP::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:2475:12: note: 'best_rate' was declared here 2475 | double best_rate, best_score; | ^~~~~~~~~ [ 93%] Linking CXX executable ../../bin/MetaProSIP cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaProSIP.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -o ../../bin/MetaProSIP ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -MF CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d -o CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp [ 93%] Linking CXX executable ../../bin/MRMPairFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMPairFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -o ../../bin/MRMPairFinder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem 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CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d -o CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp [ 93%] Linking CXX executable ../../bin/MSFraggerAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSFraggerAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -o ../../bin/MSFraggerAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp [ 94%] Linking CXX executable ../../bin/MSstatsConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSstatsConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -o ../../bin/MSstatsConverter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so 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/usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -MF CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d -o CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp [ 94%] Linking CXX executable ../../bin/MultiplexResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiplexResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -o ../../bin/MultiplexResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -MF CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d -o CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp [ 94%] Linking CXX executable ../../bin/MzMLSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzMLSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -o ../../bin/MzMLSplitter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -MF CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d -o CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp [ 94%] Linking CXX executable ../../bin/NovorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NovorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -o ../../bin/NovorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -MF CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d -o CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp [ 94%] Linking CXX executable ../../bin/NucleicAcidSearchEngine cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcidSearchEngine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -o ../../bin/NucleicAcidSearchEngine ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -MF CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d -o CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp [ 94%] Linking CXX executable ../../bin/OpenMSInfo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSInfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -o ../../bin/OpenMSInfo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -MF CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d -o CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp [ 94%] Linking CXX executable ../../bin/PeakPickerIterative cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerIterative.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -o ../../bin/PeakPickerIterative ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -MF CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d -o CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp [ 94%] Linking CXX executable ../../bin/PSMFeatureExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PSMFeatureExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -o ../../bin/PSMFeatureExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -MF CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d -o CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp [ 94%] Linking CXX executable ../../bin/QCCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -o ../../bin/QCCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -MF CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d -o CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp [ 96%] Linking CXX executable ../../bin/QCEmbedder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCEmbedder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -o ../../bin/QCEmbedder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o -MF CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d -o CMakeFiles/QCExporter.dir/QCExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp [ 96%] Linking CXX executable ../../bin/QCExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCExporter.dir/QCExporter.cpp.o -o ../../bin/QCExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -MF CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d -o CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp [ 96%] Linking CXX executable ../../bin/QCExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -o ../../bin/QCExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB 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/usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o -MF CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d -o CMakeFiles/QCImporter.dir/QCImporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp [ 96%] Linking CXX executable ../../bin/QCImporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCImporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCImporter.dir/QCImporter.cpp.o -o ../../bin/QCImporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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CMakeFiles/QCMerger.dir/QCMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp [ 96%] Linking CXX executable ../../bin/QCMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCMerger.dir/QCMerger.cpp.o -o ../../bin/QCMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -MF CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d -o CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp [ 96%] Linking CXX executable ../../bin/QCShrinker cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCShrinker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -o ../../bin/QCShrinker ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -MF CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d -o CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp:85: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/vector:63, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp:34: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 96%] Linking CXX executable ../../bin/ProteomicsLFQ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteomicsLFQ.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -o ../../bin/ProteomicsLFQ ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -MF CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d -o CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp [ 96%] Linking CXX executable ../../bin/RNADigestor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNADigestor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -o ../../bin/RNADigestor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -MF CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d -o CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp [ 96%] Linking CXX executable ../../bin/RNAMassCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNAMassCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -o ../../bin/RNAMassCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -MF CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d -o CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp [ 96%] Linking CXX executable ../../bin/RNPxlXICFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlXICFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -o ../../bin/RNPxlXICFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -MF CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d -o CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp:37: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp:35: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 96%] Linking CXX executable ../../bin/RNPxlSearch cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlSearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -o ../../bin/RNPxlSearch ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -MF CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d -o CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp [ 96%] Linking CXX executable ../../bin/RTEvaluation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTEvaluation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -o ../../bin/RTEvaluation ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -MF CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d -o CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp [ 96%] Linking CXX executable ../../bin/SemanticValidator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SemanticValidator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -o ../../bin/SemanticValidator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -MF CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d -o CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp [ 96%] Linking CXX executable ../../bin/SequenceCoverageCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SequenceCoverageCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -o ../../bin/SequenceCoverageCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o cd 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -MF CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d -o CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp [ 96%] Linking CXX executable ../../bin/SimpleSearchEngine cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleSearchEngine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -o ../../bin/SimpleSearchEngine ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -MF CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d -o CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp [ 96%] Linking CXX executable ../../bin/SiriusAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SiriusAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -o ../../bin/SiriusAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB 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src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -MF CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d -o CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp [ 97%] Linking CXX executable ../../bin/SpecLibCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -o ../../bin/SpecLibCreator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so 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src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o -MF CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d -o CMakeFiles/StaticModification.dir/StaticModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp [ 98%] Linking CXX executable ../../bin/StaticModification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/StaticModification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/StaticModification.dir/StaticModification.cpp.o -o ../../bin/StaticModification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl 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src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp [ 98%] Linking CXX executable ../../bin/SvmTheoreticalSpectrumGeneratorTrainer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -o ../../bin/SvmTheoreticalSpectrumGeneratorTrainer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -MF CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d -o CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp [ 98%] Linking CXX executable ../../bin/TICCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TICCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -o ../../bin/TICCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -MF CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d -o CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp [ 98%] Linking CXX executable ../../bin/TransformationEvaluation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationEvaluation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -o ../../bin/TransformationEvaluation ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -MF CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d -o CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp [ 98%] Linking CXX executable ../../bin/XMLValidator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/XMLValidator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -o ../../bin/XMLValidator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -MF CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d -o CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp [ 98%] Linking CXX executable ../../bin/TargetedFileConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TargetedFileConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -MF CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d -o CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 98%] Linking CXX executable ../../bin/OpenSwathDIAPreScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDIAPreScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -o ../../bin/OpenSwathDIAPreScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -MF CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d -o CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathMzMLFileCacher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathMzMLFileCacher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -o ../../bin/OpenSwathMzMLFileCacher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathWorkflow cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathWorkflow.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -o ../../bin/OpenSwathWorkflow ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -MF CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d -o CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathFileSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFileSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -o ../../bin/OpenSwathFileSplitter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -MF CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d -o CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathRewriteToFeatureXML cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -o ../../bin/OpenSwathRewriteToFeatureXML ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp [ 98%] Linking CXX executable ../../bin/MRMTransitionGroupPicker cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMTransitionGroupPicker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -o ../../bin/MRMTransitionGroupPicker ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -MF CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d -o CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp [100%] Linking CXX executable ../../bin/ImageCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -o ../../bin/ImageCreator ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ImageCreator make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target UTILS make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' # We need to tell the documenter program where the shared data are # in the source tree: share/OpenMS. That is not the install directory! # Also tell the CMake build system that we'll build the docs without # access to a XWindow server. VERBOSE=1 \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS \ HAS_XSERVER=OFF \ dh_auto_build -- doc_minimal cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" doc_minimal VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 doc_minimal make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 93 make -f CMakeFiles/Makefile2 doc/CMakeFiles/doc_minimal.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target OpenMS_GUI make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIUpdater make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target INIUpdater make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target AccurateMassSearch make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target AssayGeneratorMetabo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ClusterMassTraces make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ClusterMassTracesByPrecursor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CVInspector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DatabaseFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DecoyDatabase make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DeMeanderize make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Digestor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DigestorMotif make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Epifany make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ERPairFinder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMetaboIdent make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target FeatureFinderMetaboIdent make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SuperHirn make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/superhirn/CMakeFiles/SuperHirn.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target SuperHirn make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderSuperHirn make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FFEval make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FuzzyDiff make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDDecoyProbability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMassAccuracy make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDScoreSwitcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target LabeledEval make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MassCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaboliteAdductDecharger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaboliteSpectralMatcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaProSIP make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMPairFinder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSFraggerAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSSimulator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MSSimulator make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSstatsConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MultiplexResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MzMLSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NovorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NucleicAcidSearchEngine make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMSInfo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerIterative make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PSMFeatureExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCEmbedder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCExporter make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCImporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCShrinker make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteomicsLFQ make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNADigestor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNAMassCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNPxlXICFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNPxlSearch make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTEvaluation make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SemanticValidator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SequenceCoverageCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SimpleSearchEngine make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SiriusAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpecLibCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target SpecLibCreator make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraSTSearchAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target SpectraSTSearchAdapter make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target StaticModification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target StaticModification make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SvmTheoreticalSpectrumGeneratorTrainer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TICCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TransformationEvaluation make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XMLValidator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TargetedFileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathDIAPreScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathMzMLFileCacher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathWorkflow make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathFileSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathRewriteToFeatureXML make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMTransitionGroupPicker make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ImageCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target ImageCreator make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target UTILS make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Resampler make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target Resampler make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target BaselineFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CometAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CompNovo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CompNovoCID make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ConsensusID make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ConsensusMapNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CruxAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DatabaseSuitability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Decharger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DTAExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target EICExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ExternalCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FalseDiscoveryRate make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderCentroided make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderIdentification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderIsotopeWavelet make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMetabo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMRM make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMultiplex make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerLabeled make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeled make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeledKD make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeledQT make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FidoAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileConverter make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileFilter make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileInfo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileMerger make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target GenericWrapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target GNPSExport make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target HighResPrecursorMassCorrector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDConflictResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDFileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDFileConverter make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDPosteriorErrorProbability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDRipper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDRTCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InclusionExclusionListCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InspectAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InspectAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InternalCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IsobaricAnalyzer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target LuciphorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerIdentification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerPoseClustering make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerSpectrum make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerTreeGuided make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapRTTransformer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapStatistics make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MaRaClusterAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MascotAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MascotAdapterOnline make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MassTraceExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMMapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSGFPlusAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MyriMatchAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MzTabExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NoiseFilterGaussian make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NoiseFilterSGolay make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OMSSAAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenPepXL make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenPepXLLF make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAnalyzer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAssayGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathChromatogramExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathConfidenceScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathDecoyGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathFeatureXMLToTSV make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathRTNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerHiRes make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerWavelet make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PepNovoAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeptideIndexer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PercolatorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PhosphoScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PrecursorIonSelector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PrecursorMassCorrector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinInference make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinQuantifier make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PTModel make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PTPredict make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QualityControl make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTModel make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTPredict make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SeedListGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SeedListGenerator make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpecLibSearcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterBernNorm make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterMarkerMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterNLargest make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterParentPeakMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterScaler make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterSqrtMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterThresholdMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterWindowMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TextExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOFCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XFDR make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XTandemAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ExecutePipeline make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ExecutePipeline make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPP make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Build the doxygen documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 284 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1147 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1283 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1575 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1877 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1893 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1967 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2072 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2260 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2302 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2309 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2533 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/topp Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/utils Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Changelog.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Changelog.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/FAQ.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/FAQ.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Main.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Main.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Modules.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Modules.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/QuickStart.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/QuickStart.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/UTILS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/UTILS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing memFontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ber references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating image form_0.png for formula Generating image form_1.png for formula Generating image form_2.png for formula Generating image form_3.png for formula Generating image form_4.png for formula Generating image form_5.png for formula Generating image form_6.png for formula Generating image form_7.png for formula Generating image form_8.png for formula Generating image form_9.png for formula Generating image form_0_dark.png for formula Generating image form_1_dark.png for formula Generating image form_2_dark.png for formula Generating image form_3_dark.png for formula Generating image form_4_dark.png for formula Generating image form_5_dark.png for formula Generating image form_6_dark.png for formula Generating image form_7_dark.png for formula Generating image form_8_dark.png for formula Generating image form_9_dark.png for formula Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... Parsing code for file GenericWrapper.cpp... Parsing code for file GNPSExport.cpp... Parsing code for file HighResPrecursorMassCorrector.cpp... Parsing code for file IDConflictResolver.cpp... Parsing code for file IDFileConverter.cpp... Parsing code for file IDFilter.cpp... Parsing code for file IDMapper.cpp... Parsing code for file IDMerger.cpp... Parsing code for file IDPosteriorErrorProbability.cpp... Parsing code for file IDRipper.cpp... Parsing code for file IDRTCalibration.cpp... Parsing code for file InclusionExclusionListCreator.cpp... Parsing code for file InspectAdapter.cpp... Parsing code for file InternalCalibration.cpp... Parsing code for file IsobaricAnalyzer.cpp... Parsing code for file LuciphorAdapter.cpp... Parsing code for file MapAlignerIdentification.cpp... Parsing code for file MapAlignerPoseClustering.cpp... Parsing code for file MapAlignerSpectrum.cpp... Parsing code for file MapAlignerTreeGuided.cpp... Parsing code for file MapNormalizer.cpp... Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... Parsing code for file OpenSwathRTNormalizer.cpp... Parsing code for file PeakPickerHiRes.cpp... Parsing code for file PeakPickerWavelet.cpp... Parsing code for file PepNovoAdapter.cpp... Parsing code for file PeptideIndexer.cpp... Parsing code for file PercolatorAdapter.cpp... Parsing code for file PhosphoScoring.cpp... Parsing code for file PrecursorIonSelector.cpp... Parsing code for file PrecursorMassCorrector.cpp... Parsing code for file ProteinInference.cpp... Parsing code for file ProteinQuantifier.cpp... Parsing code for file ProteinResolver.cpp... Parsing code for file PTModel.cpp... Parsing code for file PTPredict.cpp... Parsing code for file QualityControl.cpp... Parsing code for file Resampler.cpp... Parsing code for file RTModel.cpp... Parsing code for file RTPredict.cpp... Parsing code for file SeedListGenerator.cpp... Parsing code for file SpecLibSearcher.cpp... Parsing code for file SpectraFilterBernNorm.cpp... Parsing code for file SpectraFilterMarkerMower.cpp... Parsing code for file SpectraFilterNLargest.cpp... Parsing code for file SpectraFilterNormalizer.cpp... Parsing code for file SpectraFilterParentPeakMower.cpp... Parsing code for file SpectraFilterScaler.cpp... Parsing code for file SpectraFilterSqrtMower.cpp... Parsing code for file SpectraFilterThresholdMower.cpp... Parsing code for file SpectraFilterWindowMower.cpp... Parsing code for file SpectraMerger.cpp... Parsing code for file TextExporter.cpp... Parsing code for file TOFCalibration.cpp... Parsing code for file XFDR.cpp... Parsing code for file XTandemAdapter.cpp... Parsing code for file AccurateMassSearch.cpp... Parsing code for file AssayGeneratorMetabo.cpp... Parsing code for file ClusterMassTraces.cpp... Parsing code for file ClusterMassTracesByPrecursor.cpp... Parsing code for file CVInspector.cpp... Parsing code for file DatabaseFilter.cpp... Parsing code for file DecoyDatabase.cpp... Parsing code for file DeMeanderize.cpp... Parsing code for file Digestor.cpp... Parsing code for file DigestorMotif.cpp... Parsing code for file Epifany.cpp... Parsing code for file ERPairFinder.cpp... Parsing code for file FeatureFinderMetaboIdent.cpp... Parsing code for file FeatureFinderSuperHirn.cpp... Parsing code for file FFEval.cpp... Parsing code for file FuzzyDiff.cpp... Parsing code for file IDDecoyProbability.cpp... Parsing code for file IDExtractor.cpp... Parsing code for file IDMassAccuracy.cpp... Parsing code for file IDScoreSwitcher.cpp... Parsing code for file IDSplitter.cpp... Parsing code for file ImageCreator.cpp... Parsing code for file INIUpdater.cpp... Parsing code for file LabeledEval.cpp... Parsing code for file MassCalculator.cpp... Parsing code for file MetaboliteAdductDecharger.cpp... Parsing code for file MetaboliteSpectralMatcher.cpp... Parsing code for file MetaProSIP.cpp... Parsing code for file MRMPairFinder.cpp... Parsing code for file MRMTransitionGroupPicker.cpp... Parsing code for file MSFraggerAdapter.cpp... Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... Parsing code for file RNADigestor.cpp... Parsing code for file RNAMassCalculator.cpp... Parsing code for file RNPxlSearch.cpp... Parsing code for file RNPxlXICFilter.cpp... Parsing code for file RTEvaluation.cpp... Parsing code for file SemanticValidator.cpp... Parsing code for file SequenceCoverageCalculator.cpp... Parsing code for file SimpleSearchEngine.cpp... Parsing code for file SiriusAdapter.cpp... Parsing code for file SpecLibCreator.cpp... Parsing code for file SpectraSTSearchAdapter.cpp... Parsing code for file StaticModification.cpp... Parsing code for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing code for file TargetedFileConverter.cpp... Parsing code for file TICCalculator.cpp... Parsing code for file TransformationEvaluation.cpp... Parsing code for file XMLValidator.cpp... Generating file documentation... Generating docs for file common-cmake-parameters.doxygen... Generating docs for file install-linux-bin.doxygen... Generating docs for file install-linux.doxygen... Generating docs for file install-macs-bin.doxygen... Generating docs for file install-macs.doxygen... Generating docs for file install-win-bin.doxygen... Generating docs for file install-win.doxygen... Generating docs for file Changelog.doxygen... Generating docs for file ExternalCode.doxygen... Generating docs for file FAQ.doxygen... Generating docs for file KnownDevBugs.doxygen... Generating docs for file Main.doxygen... Generating docs for file Modules.doxygen... Generating docs for file OpenMS_Tutorial_html.doxygen... Generating docs for file PyOpenMS.doxygen... Generating docs for file QuickStart.doxygen... Generating docs for file TOPP.doxygen... Generating docs for file TOPP_Tutorial_html.doxygen... Generating docs for file UTILS.doxygen... Generating docs for file OpenMS_Tutorial.doxygen... Generating docs for file TOPP_advanced.doxygen... Generating docs for file TOPP_concepts.doxygen... Generating docs for file TOPP_scripting.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPView_calling_topp.doxygen... Generating docs for file TOPPView_interface.doxygen... Generating docs for file INIFileEditor.cpp... Generating docs for file SwathWizard.cpp... Generating docs for file TOPPAS.cpp... Generating docs for file TOPPView.cpp... Generating docs for file INIFileEditorWindow.cpp... Generating docs for file QApplicationTOPP.cpp... Generating docs for file SwathWizardBase.cpp... Generating docs for file TOPPASBase.cpp... Generating docs for file TOPPViewBase.cpp... Generating docs for file BaselineFilter.cpp... Generating docs for file CometAdapter.cpp... Generating docs for file CompNovo.cpp... Generating docs for file CompNovoCID.cpp... Generating docs for file ConsensusID.cpp... Generating docs for file ConsensusMapNormalizer.cpp... Generating docs for file CruxAdapter.cpp... Generating docs for file DatabaseSuitability.cpp... Generating docs for file Decharger.cpp... Generating docs for file DTAExtractor.cpp... Generating docs for file EICExtractor.cpp... Generating docs for file ExecutePipeline.cpp... Generating docs for file ExternalCalibration.cpp... Generating docs for file FalseDiscoveryRate.cpp... Generating docs for file FeatureFinderCentroided.cpp... Generating docs for file FeatureFinderIdentification.cpp... Generating docs for file FeatureFinderIsotopeWavelet.cpp... Generating docs for file FeatureFinderMetabo.cpp... Generating docs for file FeatureFinderMRM.cpp... Generating docs for file FeatureFinderMultiplex.cpp... Generating docs for file FeatureLinkerBase.cpp... Generating docs for file FeatureLinkerLabeled.cpp... Generating docs for file FeatureLinkerUnlabeled.cpp... Generating docs for file FeatureLinkerUnlabeledKD.cpp... Generating docs for file FeatureLinkerUnlabeledQT.cpp... Generating docs for file FidoAdapter.cpp... Generating docs for file FileConverter.cpp... Generating docs for file FileFilter.cpp... Generating docs for file FileInfo.cpp... Generating docs for file FileMerger.cpp... Generating docs for file GenericWrapper.cpp... Generating docs for file GNPSExport.cpp... Generating docs for file HighResPrecursorMassCorrector.cpp... Generating docs for file IDConflictResolver.cpp... Generating docs for file IDFileConverter.cpp... Generating docs for file IDFilter.cpp... Generating docs for file IDMapper.cpp... Generating docs for file IDMerger.cpp... Generating docs for file IDPosteriorErrorProbability.cpp... Generating docs for file IDRipper.cpp... Generating docs for file IDRTCalibration.cpp... Generating docs for file InclusionExclusionListCreator.cpp... Generating docs for file InspectAdapter.cpp... Generating docs for file InternalCalibration.cpp... Generating docs for file IsobaricAnalyzer.cpp... Generating docs for file LuciphorAdapter.cpp... Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... Generating docs for file OpenSwathAnalyzer.cpp... Generating docs for file OpenSwathAssayGenerator.cpp... Generating docs for file OpenSwathChromatogramExtractor.cpp... Generating docs for file OpenSwathConfidenceScoring.cpp... Generating docs for file OpenSwathDecoyGenerator.cpp... Generating docs for file OpenSwathFeatureXMLToTSV.cpp... Generating docs for file OpenSwathRTNormalizer.cpp... Generating docs for file PeakPickerHiRes.cpp... Generating docs for file PeakPickerWavelet.cpp... Generating docs for file PepNovoAdapter.cpp... Generating docs for file PeptideIndexer.cpp... Generating docs for file PercolatorAdapter.cpp... Generating docs for file PhosphoScoring.cpp... Generating docs for file PrecursorIonSelector.cpp... Generating docs for file PrecursorMassCorrector.cpp... Generating docs for file ProteinInference.cpp... Generating docs for file ProteinQuantifier.cpp... Generating docs for file ProteinResolver.cpp... Generating docs for file PTModel.cpp... Generating docs for file PTPredict.cpp... Generating docs for file QualityControl.cpp... Generating docs for file Resampler.cpp... Generating docs for file RTModel.cpp... Generating docs for file RTPredict.cpp... Generating docs for file SeedListGenerator.cpp... Generating docs for file SpecLibSearcher.cpp... Generating docs for file SpectraFilterBernNorm.cpp... Generating docs for file SpectraFilterMarkerMower.cpp... Generating docs for file SpectraFilterNLargest.cpp... Generating docs for file SpectraFilterNormalizer.cpp... Generating docs for file SpectraFilterParentPeakMower.cpp... Generating docs for file SpectraFilterScaler.cpp... Generating docs for file SpectraFilterSqrtMower.cpp... Generating docs for file SpectraFilterThresholdMower.cpp... Generating docs for file SpectraFilterWindowMower.cpp... Generating docs for file SpectraMerger.cpp... Generating docs for file TextExporter.cpp... Generating docs for file TOFCalibration.cpp... Generating docs for file XFDR.cpp... Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FeatureFinderSuperHirn.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... GeneratinFontconfig error: No writable cache directories Fontconfig error: No writable cache directories g docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... Generating docs for page TOPP_example_featuredetection... Generating docs for page TOPP_example_featuregrouping... Generating docs for page TOPP_example_calibration... Generating docs for page TOPP_example_ppp... Generating docs for page TOPP_example_convert... Generating docs for page TOPPAS_general... Generating docs for page TOPPAS_interface... Generating docs for page TOPPAS_examples... Generating docs for page TOPPView_baseline_reduction... Generating docs for page TOPPView_smoothing... Generating docs for page TOPPView_peakpicking... Generating docs for page TOPPView_feature_detection_centroided... Generating docs for page TOPPView_introduction... Generating docs for page TOPPView_views... Generating docs for page TOPPView_modes... Generating docs for page TOPPView_analysis... Generating docs for page TOPPView_editing... Generating docs for page TOPPView_hotkeys... Generating docs for page ChangeLog... Generating docs for page external_code... Generating docs for page FAQ... Generating docs for page known_dev_bugs... Generating docs for page OpenMS_tutorial... Generating docs for page pyOpenMS... Generating docs for page Quickstart... Generating docs for page TOPP_documentation... Generating docs for page TOPP_tutorial... Generating docs for page TOPPAS_tutorial... Generating docs for page UTILS_documentation... Generating docs for page install_linux_bin... Generating docs for page install_linux... Generating docs for page install_mac_bin... Generating docs for page install_mac... Generating docs for page install_win_bin... Generating docs for page install_win... Generating docs for page TOPP_INIFileEditor... Generating docs for page TOPP_SwathWizard... Generating docs for page TOPP_TOPPAS... Generating docs for page TOPP_TOPPView... Generating docs for page TOPP_BaselineFilter... Generating docs for page TOPP_CometAdapter... Generating docs for page TOPP_CompNovo... Generating docs for page TOPP_CompNovoCID... Generating docs for page TOPP_ConsensusID... Generating docs for page TOPP_ConsensusMapNormalizer... Generating docs for page TOPP_CruxAdapter... Generating docs for page TOPP_DatabaseSuitability... Generating docs for page TOPP_Decharger... Generating docs for page TOPP_DTAExtractor... Generating docs for page TOPP_EICExtractor... Generating docs for page TOPP_ExecutePipeline... Generating docs for page TOPP_ExternalCalibration... Generating docs for page TOPP_FalseDiscoveryRate... Generating docs for page TOPP_FeatureFinderCentroided... Generating docs for page TOPP_FeatureFinderIdentification... Generating docs for page TOPP_FeatureFinderIsotopeWavelet... Generating docs for page TOPP_FeatureFinderMetabo... Generating docs for page TOPP_FeatureFinderMRM... Generating docs for page TOPP_FeatureFinderMultiplex... Generating docs for page TOPP_FeatureLinkerBase... Generating docs for page TOPP_FeatureLinkerLabeled... Generating docs for page TOPP_FeatureLinkerUnlabeled... Generating docs for page TOPP_FeatureLinkerUnlabeledKD... Generating docs for page TOPP_FeatureLinkerUnlabeledQT... Generating docs for page TOPP_FidoAdapter... Generating docs for page TOPP_FileConverter... Generating docs for page TOPP_FileFilter... Generating docs for page TOPP_FileInfo... Generating docs for page TOPP_FileMerger... Generating docs for page TOPP_GenericWrapper... Generating docs for page TOPP_GNPSExport... Generating docs for page TOPP_HighResPrecursorMassCorrector... Generating docs for page TOPP_IDConflictResolver... Generating docs for page TOPP_IDFileConverter... Generating docs for page TOPP_IDFilter... Generating docs for page TOPP_IDMapper... Generating docs for page TOPP_IDMerger... Generating docs for page TOPP_IDPosteriorErrorProbability... Generating docs for page TOPP_IDRipper... Generating docs for page TOPP_IDRTCalibration... Generating docs for page TOPP_InclusionExclusionListCreator... Generating docs for page TOPP_InspectAdapter... Generating docs for page TOPP_InternalCalibration... Generating docs for page TOPP_IsobaricAnalyzer... Generating docs for page TOPP_LuciphorAdapter... Generating docs for page TOPP_MapAlignerIdentification... Generating docs for page TOPP_MapAlignerPoseClustering... Generating docs for page TOPP_MapAlignerSpectrum... Generating docs for page TOPP_MapAlignerTreeGuided... Generating docs for page TOPP_MapNormalizer... Generating docs for page TOPP_MapRTTransformer... Generating docs for page TOPP_MapStatistics... Generating docs for page TOPP_MaRaClusterAdapter... Generating docs for page TOPP_MascotAdapter... Generating docs for page TOPP_MascotAdapterOnline... Generating docs for page TOPP_MassTraceExtractor... Generating docs for page TOPP_MRMMapper... Generating docs for page TOPP_MSGFPlusAdapter... Generating docs for page TOPP_MyriMatchAdapter... Generating docs for page TOPP_MzTabExporter... Generating docs for page TOPP_NoiseFilterGaussian... Generating docs for page TOPP_NoiseFilterSGolay... Generating docs for page TOPP_OMSSAAdapter... Generating docs for page TOPP_OpenPepXL... Generating docs for page TOPP_OpenPepXLLF... Generating docs for page TOPP_OpenSwathAnalyzer... Generating docs for page TOPP_OpenSwathAssayGenerator... Generating docs for page TOPP_OpenSwathChromatogramExtractor... Generating docs for page TOPP_OpenSwathConfidenceScoring... Generating docs for page TOPP_OpenSwathDecoyGenerator... Generating docs for page TOPP_OpenSwathFeatureXMLToTSV... Generating docs for page TOPP_OpenSwathRTNormalizer... Generating docs for page TOPP_PeakPickerHiRes... Generating docs for page TOPP_PeakPickerWavelet... Generating docs for page TOPP_PepNovoAdapter... Generating docs for page TOPP_PeptideIndexer... Generating docs for page TOPP_PercolatorAdapter... Generating docs for page TOPP_PhosphoScoring... Generating docs for page TOPP_PrecursorIonSelector... Generating docs for page TOPP_PrecursorMassCorrector... Generating docs for page TOPP_ProteinInference... Generating docs for page TOPP_ProteinQuantifier... Generating docs for page TOPP_ProteinResolver... Generating docs for page TOPP_PTModel... Generating docs for page TOPP_PTPredict... Generating docs for page TOPP_QualityControl... Generating docs for page TOPP_Resampler... Generating docs for page TOPP_RTModel... Generating docs for page TOPP_RTPredict... Generating docs for page TOPP_SeedListGenerator... Generating docs for page TOPP_SpecLibSearcher... Generating docs for page TOPP_SpectraFilterBernNorm... Generating docs for page TOPP_SpectraFilterMarkerMower... Generating docs for page TOPP_SpectraFilterNLargest... Generating docs for page TOPP_SpectraFilterNormalizer... Generating docs for page TOPP_SpectraFilterParentPeakMower... Generating docs for page TOPP_SpectraFilterScaler... Generating docs for page TOPP_SpectraFilterSqrtMower... Generating docs for page TOPP_SpectraFilterThresholdMower... Generating docs for page TOPP_SpectraFilterWindowMower... Generating docs for page TOPP_SpectraMerger... Generating docs for page TOPP_TextExporter... Generating docs for page TOPP_TOFCalibration... Generating docs for page TOPP_XFDR... Generating docs for page TOPP_XTandemAdapter... Generating docs for page UTILS_AccurateMassSearch... Generating docs for page UTILS_AssayGeneratorMetabo... Generating docs for page UTILS_ClusterMassTraces... Generating docs for page UTILS_ClusterMassTracesByPrecursor... Generating docs for page UTILS_CVInspector... Generating docs for page UTILS_DatabaseFilter... Generating docs for page UTILS_DecoyDatabase... Generating docs for page UTILS_DeMeanderize... Generating docs for page UTILS_Digestor... Generating docs for page UTILS_DigestorMotif... Generating docs for page UTILS_Epifany... Generating docs for page UTILS_ERPairFinder... Generating docs for page UTILS_FeatureFinderMetaboIdent... Generating docs for page UTILS_FeatureFinderSuperHirn... Generating docs for page UTILS_FFEval... Generating docs for page UTILS_FuzzyDiff... Generating docs for page UTILS_IDDecoyProbability... Generating docs for page UTILS_IDExtractor... Generating docs for page UTILS_IDMassAccuracy... Generating docs for page UTILS_IDScoreSwitcher... Generating docs for page UTILS_IDSplitter... Generating docs for page UTILS_ImageCreator... Generating docs for page UTILS_INIUpdater... Generating docs for page UTILS_LabeledEval... Generating docs for page UTILS_MassCalculator... Generating docs for page UTILS_MetaboliteAdductDecharger... Generating docs for page UTILS_MetaboliteSpectralMatcher... Generating docs for page UTILS_MetaProSIP... Generating docs for page UTILS_MRMPairFinder... Generating docs for page UTILS_MRMTransitionGroupPicker... Generating docs for page UTILS_MSFraggerAdapter... Generating docs for page UTILS_MSSimulator... Generating docs for page UTILS_MSstatsConverter... Generating docs for page UTILS_MultiplexResolver... Generating docs for page UTILS_MzMLSplitter... Generating docs for page UTILS_NovorAdapter... Generating docs for page UTILS_NucleicAcidSearchEngine... Generating docs for page UTILS_OpenSwathDIAPreScoring... Generating docs for page UTILS_OpenSwathFileSplitter... Generating docs for page UTILS_OpenSwathMzMLFileCacher... Generating docs for page UTILS_OpenSwathRewriteToFeatureXML... Generating docs for page UTILS_OpenSwathWorkflow... Generating docs for page UTILS_PeakPickerIterative... Generating docs for page UTILS_ProteomicsLFQ... Generating docs for page UTILS_PSMFeatureExtractor... Generating docs for page UTILS_QCCalculator... Generating docs for page UTILS_QCEmbedder... Generating docs for page UTILS_QCExporter... Generating docs for page UTILS_QCExtractor... Generating docs for page UTILS_QCImporter... Generating docs for page UTILS_QCMerger... Generating docs for page UTILS_QCShrinker... Generating docs for page UTILS_RNADigestor... Generating docs for page UTILS_RNAMassCalculator... Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluatioFontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories n... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating docs for page improvement... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group SpectrumWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 14 parallel threads... 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error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories 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directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ning dot for graph 43/224 Running dot for graph 44/224 Running dot for graph 45/224 Running dot for graph 46/224 Running dot for graph 47/224 Running dot for graph 48/224 Running dot for graph 49/224 Running dot for graph 50/224 Running dot for graph 51/224 Running dot for graph 52/224 Running dot for graph 53/224 Running dot for graph 54/224 Running dot for graph 55/224 Running dot for graph 56/224 Running dot for graph 57/224 Running dot for graph 58/224 Running dot for graph 59/224 Running dot for graph 60/224 Running dot for graph 61/224 Running dot for graph 62/224 Running dot 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Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories graph 181/224 Running dot for graph 182/224 Running dot for graph 183/224 Running dot for graph 184/224 Running dot for graph 185/224 Running dot for graph 186/224 Running dot for graph 187/224 Running dot for graph 188/224 Running dot for graph 189/224 Running dot for graph 190/224 Running dot for graph 191/224 Running dot for graph 192/224 Running dot for graph 193/224 Running dot for graph 194/224 Running dot for graph 195/224 Running dot for graph 196/224 Running dot for graph 197/224 Running dot for graph 198/224 Running dot for graph 199/224 Running dot for graph 200/224 Running dot for graph 201/224 Running dot for graph 202/224 Running dot for graph 203/224 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Patching output file 430/440 Patching output file 431/440 Patching output file 432/440 Patching output file 433/440 Patching output file 434/440 Patching output file 435/440 Patching output file 436/440 Patching output file 437/440 Patching output file 438/440 Patching output file 439/440 Patching output file 440/440 type lookup cache used 62166/65536 hits=240509 misses=62324 symbol lookup cache used 29239/65536 hits=195776 misses=29239 finished... cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy /build/reproducible-path/openms-2.6.0+cleaned1/doc/index.html index.html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The documentation has been successfully created." The documentation has been successfully created. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target doc_minimal make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' # Run the test suite # VERBOSE=1 /usr/bin/make -C /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu test # Prepare the topp.1 man page with all the one-line description got # from calling individually each program in /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin with # --help switch. The newly built libs need be in the path so that the # binaries can execute. Same for the shared data path, because the # binaries need it to run. Note the calling in sh ./ with the script # shell being itself executable, otherwise git-buildpackage would # fail. cd /build/reproducible-path/openms-2.6.0+cleaned1/debian && \ PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ sh ./binaries-extract-one-line-man-desc.sh /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin /build/reproducible-path/openms-2.6.0+cleaned1/debian ./binaries-extract-one-line-man-desc.sh: 6: cd: can't cd to /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin #VERBOSE=1 LD_LIBRARY_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/i386-linux-gnu:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/i386-linux-gnu:/usr/lib/libeatmydata\ #PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games\ #OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ #cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/doc/doxygen && doxygen Doxyfile # There are two files that we do not want to ship because # they exist in their own Debian packages. rm -f /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/usr/share/doc/html/jquery.js make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' make[1]: 'override_dh_auto_test' is up to date. make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake --no-parallel dh_testroot -O--buildsystem=cmake -O--no-parallel dh_prep -O--buildsystem=cmake -O--no-parallel rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars rm -fr -- debian/.debhelper/generated/libopenms2.6.0/ debian/libopenms2.6.0/ debian/tmp/ debian/.debhelper/generated/libopenms-dev/ debian/libopenms-dev/ debian/.debhelper/generated/topp/ debian/topp/ debian/.debhelper/generated/openms-common/ debian/openms-common/ debian/.debhelper/generated/openms-doc/ debian/openms-doc/ debian/.debhelper/generated/openms/ debian/openms/ dh_installdirs -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' VERBOSE=1 \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ dh_auto_install install -m0755 -d /build/reproducible-path/openms-2.6.0\+cleaned1/debian/tmp cd obj-i686-linux-gnu && make -j1 install DESTDIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 53%] Built target OpenMS make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/superhirn/CMakeFiles/SuperHirn.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target SuperHirn make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target OpenMS_GUI make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/INIFileEditor_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor_autogen make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/SwathWizard_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard_autogen make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target TOPPAS_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPAS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target TOPPAS_autogen make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPAS make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPView_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView_autogen make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileConverter make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileFilter make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileMerger make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDFileConverter make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InspectAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SeedListGenerator make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ExecutePipeline make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target Resampler make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target FeatureFinderMetaboIdent make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSSimulator make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCExporter make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target SpecLibCreator make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target SpectraSTSearchAdapter make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target StaticModification make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ImageCreator make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target INIUpdater make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target UTILS make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target TOPP make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Build the doxygen documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 284 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1147 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1283 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1575 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1877 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1893 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1967 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2072 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2260 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2302 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2309 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2533 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! Doxygen version used: 1.9.8 Searching for include files... Searching for example files... 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Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating image form_0.png for formula Generating image form_1.png for formula Generating image form_2.png for formula Generating image form_3.png for formula Generating image form_4.png for formula Generating image form_5.png for formula Generating image form_6.png for formula Generating image form_7.png for formula Generating image form_8.png for formula Generating image form_9.png for formula Generating image form_0_dark.png for formula Generating image form_1_dark.png for formula Generating image form_2_dark.png for formula Generating image form_3_dark.png for formula Generating image form_4_dark.png for formula Generating image form_5_dark.png for formula Generating image form_6_dark.png for formula Generating image form_7_dark.png for formula Generating image form_8_dark.png for formula Generating image form_9_dark.png for formula Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... 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Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... 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Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... 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Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... 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Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FeatureFinderSuperHirn.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... Generating docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... 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Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluation... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating docs for page improvement... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group SpectrumWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 14 parallel threads... 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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The documentation has been successfully created." The documentation has been successfully created. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target doc_minimal make -f doc/CMakeFiles/doc_tutorials.dir/build.make doc/CMakeFiles/doc_tutorials.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_tutorials.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_tutorials.dir/build.make doc/CMakeFiles/doc_tutorials.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Build the OpenMS/TOPP pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating OpenMS pdf tutorial" Creating OpenMS pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory OpenMS_tutorial/latex_output cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir OpenMS_tutorial/ /usr/bin/doxygen Doxyfile warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1046 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1182 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1463 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1751 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1767 of file 'Doxyfile' has become obsolete. 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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on refman.pdf (32 pages, 402757 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir OpenMS_tutorial/latex_output/ /usr/bin/makeindex refman.idx This is makeindex, version 2.17 [TeX Live 2023] (kpathsea + Thai support). Scanning input file refman.idx....done (1 entries accepted, 0 rejected). Sorting entries...done (0 comparisons). Generating output file refman.ind....done (5 lines written, 0 warnings). Output written in refman.ind. 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Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy OpenMS_tutorial/latex_output/refman.pdf OpenMS_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The OpenMS tutorial in PDF format has been successfully created:" The OpenMS tutorial in PDF format has been successfully created: cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo doc/OpenMS_tutorial.pdf doc/OpenMS_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating TOPP/TOPPView pdf tutorial" Creating TOPP/TOPPView pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory TOPP_tutorial/latex_output cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir TOPP_tutorial/ /usr/bin/doxygen Doxyfile warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete. 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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on refman.pdf (52 pages, 1801562 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir TOPP_tutorial/latex_output/ /usr/bin/makeindex refman.idx This is makeindex, version 2.17 [TeX Live 2023] (kpathsea + Thai support). Scanning input file refman.idx....done (26 entries accepted, 0 rejected). Sorting entries....done (131 comparisons). Generating output file refman.ind....done (66 lines written, 0 warnings). Output written in refman.ind. 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\vbox (badness 10000) detected at line 31 Underfull \vbox (badness 10000) detected at line 40 Underfull \vbox (badness 10000) detected at line 49 [41 <./TOPP_alignment.png (PNG copy)>]) [42] (./TOPP_example_featuredetection.tex Underfull \hbox (badness 10000) in paragraph at lines 27--27 Underfull \vbox (badness 10000) detected at line 27 Underfull \hbox (badness 10000) in paragraph at lines 54--54 Underfull \vbox (badness 10000) detected at line 54 [43]) [44] (./TOPP_example_featuregrouping.tex Underfull \hbox (badness 10000) detected at line 29 [][][] ) [45 <./TOPP_labeled_quant.png (PNG copy)> <./TOPP_labelfree_quant.png (PNG co py)>] (./TOPP_example_id.tex LaTeX Font Warning: Font shape `OMS/ntxtlf/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbackslash' on input line 4. ) (./TOPP_example_ppp.tex Overfull \hbox (131.68765pt too wide) in paragraph at lines 19--1 \OT1/ntxtlf/b/n/10 IDMap-per \OT1/minntx/m/n/10 tool. The com-bined re-sults ca n then be ex-ported by the \OT1/ntxtlf/b/n/10 Text[]Exporter \OT1/minntx/m/n/10 tool[]: [] [46 <./TOPP_consensus_id.png (PNG copy)>]) [47] (./TOPP_example_convert.tex) [48] (./TOPP_example_qualitycontrol.tex Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 1460) in paragraph at lines 177--177 \OT1/minntx/m/n/10 The Fragment[]Mass[]Error met-ric com-putes a list Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 4108) in paragraph at lines 177--177 []\OT1/minntx/m/n/10 Frequency map of missed cleav-ages as Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 2237) in paragraph at lines 177--177 []\TS1/ntxtlf/m/n/10 '\OT1/minntx/m/n/10 activation[][][]method\TS1/ntxtlf/m/n/ 10 '\OT1/minntx/m/n/10 set to ac-ti-va-tion method Underfull \hbox (badness 2435) in paragraph at lines 177--177 []\TS1/ntxtlf/m/n/10 '\OT1/minntx/m/n/10 base[][][]peak[][][]intensity\TS1/ntxt lf/m/n/10 '\OT1/minntx/m/n/10 set to high-est in-ten-sity Underfull \hbox (badness 10000) in paragraph at lines 177--177 [49 <./TOPP_qualitycontrol.png>] [50] [51] [52]) [53] (./refman.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on refman.pdf (54 pages, 1812066 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy TOPP_tutorial/latex_output/refman.pdf TOPP_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The OpenMS tutorial in PDF format has been successfully created:" The OpenMS tutorial in PDF format has been successfully created: cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo doc/TOPP_tutorial.pdf doc/TOPP_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target doc_tutorials make -f doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build.make doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build.make doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -MF CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o.d -o CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_AASequence.cpp [ 94%] Linking CXX executable ../../bin/Tutorial_AASequence cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_AASequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -o ../../bin/Tutorial_AASequence ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -MF CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o.d -o CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_Clustering.cpp [ 94%] Linking CXX executable ../../bin/Tutorial_Clustering cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_Clustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -o ../../bin/Tutorial_Clustering ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_Clustering make -f doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o -MF CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o.d -o CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:81:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 81 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:31: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:88:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 88 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:95:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 95 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Linking CXX executable ../../bin/Tutorial_ComparatorUtils cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_ComparatorUtils.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_ComparatorUtils make -f doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/Tutorial_DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_DPosition make -f doc/code_examples/CMakeFiles/Tutorial_DRange.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DRange.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_DRange.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o -MF CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o.d -o CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_DRange.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_DRange cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_DRange.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now 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/usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_DRange make -f 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doc/code_examples/CMakeFiles/Tutorial_Enzyme.dir/Tutorial_Enzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_Enzyme make -f doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/build.make doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd 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doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -MF CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o.d -o CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_EmpiricalFormula.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_EmpiricalFormula cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_EmpiricalFormula.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -o ../../bin/Tutorial_EmpiricalFormula ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -MF CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o.d -o CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FeatureFinder.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FeatureFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FeatureFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -o ../../bin/Tutorial_FeatureFinder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FeatureFinder make -f doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -MF CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o.d -o CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FeatureMap.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FeatureMap cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FeatureMap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -o ../../bin/Tutorial_FeatureMap ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FeatureMap make -f doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -MF CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o.d -o CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FileIO cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -o ../../bin/Tutorial_FileIO ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FileIO make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -MF CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o.d -o CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO_mzML.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FileIO_mzML cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO_mzML.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -o ../../bin/Tutorial_FileIO_mzML ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FileIO_mzML make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o cd 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doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -MF CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o.d -o CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO_Consumer.cpp [ 96%] Linking CXX executable ../../bin/Tutorial_FileIO_Consumer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO_Consumer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -o ../../bin/Tutorial_FileIO_Consumer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -MF CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o.d -o CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GaussFilter.cpp [ 96%] Linking CXX executable ../../bin/Tutorial_GaussFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GaussFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -o ../../bin/Tutorial_GaussFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/Tutorial_MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -MF CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o.d -o CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_MSSpectrum.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_MSSpectrum cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_MSSpectrum.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -o ../../bin/Tutorial_MSSpectrum ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target Tutorial_MSSpectrum make -f doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/Tutorial_MapAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/Tutorial_MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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doc/code_examples/CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -MF CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o.d -o CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_Param.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_Param cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_Param.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -o ../../bin/Tutorial_Param ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target Tutorial_Param make -f doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/Tutorial_PeakPickerCWT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && 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/usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/Tutorial_Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ 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CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o.d -o CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_RangeManager.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_RangeManager cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_RangeManager.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o -o ../../bin/Tutorial_RangeManager ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 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/build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB 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CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ResidueModification.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_ResidueModification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_ResidueModification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o -o ../../bin/Tutorial_ResidueModification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_ResidueModification make -f doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -MF CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_SavitzkyGolayFilter.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_SavitzkyGolayFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -o ../../bin/Tutorial_SavitzkyGolayFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_SavitzkyGolayFilter make -f doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -MF CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o.d -o CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_TOFCalibration.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_TOFCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_TOFCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -o ../../bin/Tutorial_TOFCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_TOFCalibration make -f doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_TheoreticalSpectrumGenerator.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_TheoreticalSpectrumGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -o ../../bin/Tutorial_TheoreticalSpectrumGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_TheoreticalSpectrumGenerator make -f doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -MF CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o.d -o CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_MorphologicalFilter.cpp [100%] Linking CXX executable ../../bin/Tutorial_MorphologicalFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_MorphologicalFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -o ../../bin/Tutorial_MorphologicalFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_MorphologicalFilter make -f doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/Tutorial_Unlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_Unlabeled make -f doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/build.make doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -MF CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o.d -o CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_typeAsString.cpp [100%] Linking CXX executable ../../bin/Tutorial_typeAsString cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_typeAsString.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -o ../../bin/Tutorial_typeAsString ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_typeAsString make -f doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -MF CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o.d -o CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_PeakIntensityPredictor.cpp [100%] Linking CXX executable ../../bin/Tutorial_PeakIntensityPredictor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_PeakIntensityPredictor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -o ../../bin/Tutorial_PeakIntensityPredictor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_PeakIntensityPredictor make -f doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -MF CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o.d -o CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_Spectrum1D.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_Spectrum1D cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_Spectrum1D.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -o ../../bin/Tutorial_GUI_Spectrum1D ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_Spectrum1D make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -MF CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o.d -o CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_ParamEditor.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_ParamEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_ParamEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -o ../../bin/Tutorial_GUI_ParamEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_ParamEditor make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -MF CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o.d -o CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_ListEditor.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_ListEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_ListEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -o ../../bin/Tutorial_GUI_ListEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_ListEditor make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ChargePair.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Compomer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ConstRefVector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ConvexHull2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappingTerm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappingRule.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVReference.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DBoundingBox.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DIntervalBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DPosition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DRange.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DataValue.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Date.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DateTime.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DefaultParamHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DistanceMatrix.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/FASTAContainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/GridFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/IsotopeCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/KDTree.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ListUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ListUtilsIO.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/LPWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Map.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/MassExplainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/MatchedIterator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Matrix.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Param.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/QTCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/String.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/StringUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/StringListUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ToolDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/AbsoluteQuantitationStandards.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Acquisition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/AcquisitionInfo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTerm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTermList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTermListInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ChromatogramSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ContactPerson.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DataArrays.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DataProcessing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Digestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DocumentIDTagger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DocumentIdentifier.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ExperimentalDesign.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ExperimentalSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Gradient.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/HPLC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Identification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IdentificationHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Instrument.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/InstrumentSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IonDetector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IonSource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MSQuantifications.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MassAnalyzer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoInterfaceUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoRegistry.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Modification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideEvidence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Precursor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Product.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ProteinHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ProteinIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Sample.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SampleTreatment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ScanWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Software.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SourceFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumLookup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumMetaDataLookup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Tagging.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/AppliedProcessingStep.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DBSearchParam.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataProcessingSoftware.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataProcessingStep.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataQuery.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentificationData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentificationDataConverter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentifiedCompound.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentifiedSequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MetaData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MoleculeParentMatch.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MoleculeQueryMatch.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ParentMolecule.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ParentMoleculeGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/QueryMatchGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ScoreType.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ScoredProcessingResult.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/AreaIterator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/BaseFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ChromatogramPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ChromatogramTools.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ComparatorUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConsensusFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConversionHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConsensusMap.h -- Up-to-date: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConversionHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/DPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Feature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/FeatureHandle.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/FeatureMap.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MassTrace.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MRMFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MRMTransitionGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSChromatogram.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/OnDiscMSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Peak1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Peak2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/PeakIndex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RangeManager.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RangeUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RichPeak2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/StandardTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/StandardDeclarations.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/SpectrumHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/AAIndex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/AASequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/CrossLinksDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DecoyGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Element.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ElementDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EmpiricalFormula.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EnzymaticDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzyme.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationDefinition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationsDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/NASequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ProteaseDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ProteaseDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Residue.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ResidueDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ResidueModification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RNaseDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RNaseDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Ribonucleotide.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RibonucleotideDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SimpleTSGXLMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SpectrumAnnotator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Tagger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/WeightWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Base64.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Bzip2Ifstream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Bzip2InputStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CachedMzML.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ChromeleonFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CompressedInputSource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CVMappingFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ConsensusXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ControlledVocabulary.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CsvFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DTA2DFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/EDTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ExperimentalDesignFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FASTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FeatureXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FileHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/GzipIfstream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/GzipInputStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HDF5Connector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IBSpectraFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IdXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IndexedMzMLFileLoader.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/InspectInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/InspectOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/KroenikFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/LibSVMEncoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MRMFeaturePickerFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MRMFeatureQCFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MS2File.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSNumpressCoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSPFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSPGenericFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSstatsFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotGenericFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotRemoteQuery.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MsInspectFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzDataFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzTab.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzTabFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OMSSACSVFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OMSSAXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OSWFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ParamXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PTMXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PeakTypeEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepNovoInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepNovoOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepXMLFileMascot.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PercolatorOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ProtXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/QcMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SequestInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SequestOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SpecArrayFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SVOutStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SwathFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SqliteConnector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SqMassFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TextFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ToolDescriptionFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TransformationXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/UnimodXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XTandemInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XTandemXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FileTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzIdentMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzQuantMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TraMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XMassFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XQuestResultXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ZlibCompression.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/AcqusHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/FidHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzDataHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/TraMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/XMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/VALIDATORS/XMLValidator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h -- Installing: 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-- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/SVM/SimpleSVM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/SVM/SVMWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/PIP/LocalLinearMap.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/MRMMapping.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/HyperScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/PScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/XQuestScores.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/HashGrid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/ID/IDFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/GaussFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NLargest.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/Scaler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/DetectabilitySimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/DigestSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/EGHModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/EGHFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/IonizationSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/MSSim.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RTSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RawMSSignalSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/SimTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/BaseLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/O18Labeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/SILACLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/ICPLLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Contaminants.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/FragmentMassError.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/FWHM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/MissedCleavages.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Ms2IdentificationRate.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Ms2SpectrumStats.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/MzCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/PeptideMass.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/QCBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/RTAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/DBSuitability.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/TIC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ConsoleUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/INIUpdater.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/MapAlignerBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/OpenSwathBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ParameterInformation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ToolHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/TOPPBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/build_config.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/config.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/openms_package_version.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/openms_data_path.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMSConfig.h -- Up-to-date: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ConsensusXML_1_5.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ToolDescriptor_1_0.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_0.xsd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/Param_1_0.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/pepXML_v114.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_4.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_8.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/IdXML_1_1.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_3.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_2.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/mzML_1_10.xsd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnUtil.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnConfig.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/libOpenMS_GUI.so.2.6.0 -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MISC/ExternalProcessMBox.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MISC/GUIHelpers.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisTickCalculator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisPainter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ColorSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedTabBar.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedWorkspace.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/FilterList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/GUIProgressLoggerImpl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/HistogramWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/InputFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/InputFileList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/LayerData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ListEditor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MetaDataBrowser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MultiGradient.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MultiGradientSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/OutputDirectory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ParamEditor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectraViewWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectraIdentificationViewWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum1DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum1DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum2DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum2DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectrumCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectrumWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SwathLibraryStats.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASEdge.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASInputFileListVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASLogWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASMergerVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASOutputFileListVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASResource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASResources.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASScene.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASSplitterVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASTabBar.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASToolVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASTreeView.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/HistogramDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/PythonSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/ToolsDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/VISUAL/OpenMS_GUIConfig.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/INIFileEditor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SwathWizard -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOPPAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOPPView -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/BaselineFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CometAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CompNovo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CompNovoCID -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ConsensusID -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ConsensusMapNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CruxAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DatabaseSuitability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Decharger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DTAExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/EICExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ExternalCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FalseDiscoveryRate -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderCentroided -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderIdentification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderIsotopeWavelet -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMetabo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMRM -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMultiplex -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerLabeled -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeled -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeledKD -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeledQT -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FidoAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileInfo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/GenericWrapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/GNPSExport -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/HighResPrecursorMassCorrector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDConflictResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDFileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDPosteriorErrorProbability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDRipper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDRTCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InclusionExclusionListCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InspectAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InternalCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IsobaricAnalyzer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/LuciphorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerIdentification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerPoseClustering -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerSpectrum -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerTreeGuided -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapRTTransformer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapStatistics -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MaRaClusterAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MascotAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MascotAdapterOnline -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MassTraceExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMMapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSGFPlusAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MyriMatchAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MzTabExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NoiseFilterGaussian -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NoiseFilterSGolay -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OMSSAAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenPepXL -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenPepXLLF -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathAnalyzer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathAssayGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathChromatogramExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathConfidenceScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathDecoyGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathFeatureXMLToTSV -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathRTNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerHiRes -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerWavelet -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PepNovoAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeptideIndexer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PercolatorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PhosphoScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PrecursorIonSelector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PrecursorMassCorrector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinInference -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinQuantifier -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PTModel -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PTPredict -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QualityControl -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTModel -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTPredict -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SeedListGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpecLibSearcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterBernNorm -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterMarkerMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterNLargest -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterParentPeakMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterScaler -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterSqrtMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterThresholdMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterWindowMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TextExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOFCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XFDR -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XTandemAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ExecutePipeline -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Resampler -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/AccurateMassSearch -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/AssayGeneratorMetabo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ClusterMassTraces -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ClusterMassTracesByPrecursor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CVInspector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DatabaseFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DecoyDatabase -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DeMeanderize -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Digestor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DigestorMotif -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Epifany -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ERPairFinder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMetaboIdent -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderSuperHirn -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FFEval -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FuzzyDiff -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDDecoyProbability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMassAccuracy -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDScoreSwitcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/LabeledEval -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MassCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaboliteAdductDecharger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaboliteSpectralMatcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaProSIP -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMPairFinder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSFraggerAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSSimulator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSstatsConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MultiplexResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MzMLSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NovorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NucleicAcidSearchEngine -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenMSInfo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerIterative -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PSMFeatureExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCEmbedder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCImporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCShrinker -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteomicsLFQ -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNADigestor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNAMassCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNPxlXICFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNPxlSearch -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTEvaluation -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SemanticValidator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SequenceCoverageCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SimpleSearchEngine -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SiriusAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpecLibCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraSTSearchAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/StaticModification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TICCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TransformationEvaluation -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XMLValidator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TargetedFileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathDIAPreScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathMzMLFileCacher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathWorkflow -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathFileSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathRewriteToFeatureXML -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMTransitionGroupPicker -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ImageCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/INIUpdater -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/graph_legend.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeakPickerWavelet.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__dep__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bc_sd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TextExporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_calibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_9_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerTreeGuided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SpecLibCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/deprecated.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/minus.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SiriusAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1AnnotatedHit__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_0.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_9.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ERPairFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSFraggerAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-win_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ExecutePipeline.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_f.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_a5a355bc2fffce99f4d06ccbc3519db8.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCImporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathAnalyzer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_eval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DeMeanderize.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/svg.min.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ImageCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_noisefilter.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterThresholdMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_views.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterParentPeakMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__tutorial_2TOPPAS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/todo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_2.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_DatabaseSuitability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Kernel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNADigestor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeptideIndexer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_4.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CometAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_editing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_s.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SpectraSTSearchAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__Tutorial__html_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_example_profile_data_processing.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CompNovo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_feature_detection_centroided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QuickStart_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_INIUpdater.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DigestorMotif.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_PSMFeatureExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderIdentification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_5_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_XMLValidator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPASBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InclusionExclusionListCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_example_merger.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SILACAnalyzer_algorithm.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ConsensusMapNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_NoiseFilterSGolay.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDScoreSwitcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathConfidenceScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_pp_picked.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TextExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_Ecoli_Identification.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_mapalignment.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MassTraceExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/EICExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_3.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_hd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDPosteriorErrorProbability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_g.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/favicon.ico -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_EICExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PepNovoAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/style_ini.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/known_dev_bugs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPViewBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OMSSAAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Changelog_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MultiplexResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_6_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SeedListGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Quickstart.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapStatistics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IsobaricAnalyzer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_1.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderIsotopeWavelet.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_RTModel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_h.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_QualityControl.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_win_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathRTNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Modules_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_NoiseFilterGaussian.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_featuredetection.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/pages.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FeatureFinderSuperHirn.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeledQT.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSstatsConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__concepts_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_enum.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FFEval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathChromatogramExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__advanced_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSstatsConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_LabeledEval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_0_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_Decharger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PhosphoScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1AnnotatedHit__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp_source.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_1.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_analysis.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InclusionExclusionListCreator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpecLibSearcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_labeled_quant.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_interface.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__dep__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MascotAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterMarkerMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_smoothing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_Digestor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_4_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaboliteAdductDecharger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ExternalCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_DTAExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_parameters.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dynsections.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RTEvaluation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ImageCreator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bc_s.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ChangeLog.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_mac_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MSGFPlusAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCShrinker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_bd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_ad.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DecoyDatabase.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MyriMatchAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/splitbard.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathRewriteToFeatureXML.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathFileSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSstatsConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/open.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SemanticValidator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dot_inline_dotgraph_1.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_Quantitation.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_a.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeakPickerHiRes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDFileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Simulation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView__calling__topp_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_general.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp.html -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinQuantifier.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathWorkflow.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_mac.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/docd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doc.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Terms_Map.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/experimental.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_2_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraComparison.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MzMLSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOPPAS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ConsensusID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDRipper.html -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Main_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp__incl.svg -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_sd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FidoAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_Epifany.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CompNovoCID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_0.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_14.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_18.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_e.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_15.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_d.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_a.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_9.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_17.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_a.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_12.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/mag_seld.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_14.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_2.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_6.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_7.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_2.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_9.js -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_raw_data.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FalseDiscoveryRate.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/closed.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDRTCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/formula.repository -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp__incl.svg -- Installing: 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-- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_PeakPickerIterative.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsStatistics.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_type.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMRM.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Spectrum2DWidget.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DatabaseFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo.html -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView__interface_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TICCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_1D.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS__Tutorial_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapRTTransformer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/index.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CruxAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_Resampler.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_baseline_reduction.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeled.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOPPView.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MRMMapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__System.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_general.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_h.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-macs-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/sync_on.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Spectrum3DWidget.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SwathWizard.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMultiplex.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_XFDR.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PercolatorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_75x55_transparent.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Kernel_DataPoints.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_introduction.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/improvement.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_examples.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_baseline_filtered.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_b.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-win-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/plusd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ClusterMassTraces.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals_defs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_documentation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/topics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_7.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ImageCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MascotAdapterOnline.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_menu.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_GNPSExport.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_labelfree_quant.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bug.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MaRaClusterAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_concepts.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_hotkeys.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathDIAPreScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaboliteSpectralMatcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterScaler.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Metadata.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-macs_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MRMPairFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_fd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterBernNorm_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_NucleicAcidSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PrecursorMassCorrector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_results_3d.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_overview.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_statistics.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_win.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathMzMLFileCacher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterSqrtMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_linux_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MzTabExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterBernNorm.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_e68e8157741866f444e17edd764ebbae.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_3.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_XTandemAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MassCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerIdentification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/files.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_caacfbd3799919944b233424e5b36887.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_INIFileEditor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinInference.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/pyOpenMS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PrecursorIonSelector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PTModel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespaces.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/plus.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsStatistics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Terms_Spectrum.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCode_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_signalprocessing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeledKD.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_run_options.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNPxlSearch.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/hierarchy.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Concept.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_linux.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_NovorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_qualitycontrol.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FAQ_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherits.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS__Tutorial__html_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenPepXL.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/minusd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_AssayGeneratorMetabo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_modes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_hd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SimpleSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_ff_centroided.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ClusterMassTracesByPrecursor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderCentroided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_LuciphorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TransformationEvaluation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_8.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDMapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Datastructures.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathFeatureXMLToTSV.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen_2public_2TOPPAS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tabs.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerPoseClustering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileInfo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/graph_legend.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMetabo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_8_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PTPredict.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_ppp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FuzzyDiff.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_AccurateMassSearch.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FeatureFinderMetaboIdent.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_edges.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraFilter_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_noisefilter_filtered.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TargetedFileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PyOpenMS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_StaticModification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCImporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Digestor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespaceOpenMS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_CVInspector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-linux-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_BaselineFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathAssayGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__scripting_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderopen.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_advanced.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDDecoyProbability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_1_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/splitbar.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/jquery.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_vars.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_2.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterBernNorm_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaDataBrowser.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_handling.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCEmbedder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerSpectrum.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals_type.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_id.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSSimulator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_documentation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderopend.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SvmTheoreticalSpectrumGeneratorTrainer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/menudata.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_convert.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_alignment.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_icons.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_help.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerLabeled.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDConflictResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOFCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaProSIP.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterWindowMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNPxlXICFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MRMTransitionGroupPicker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/external_code.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_parts.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderclosedd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_5.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathDecoyGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCImporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerBase.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Chemistry.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_simple_example.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_InternalCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_HighResPrecursorMassCorrector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNAMassCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_InclusionExclusionListCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/common-cmake-parameters_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_featuregrouping.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/sync_off.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/annotated.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_results_2d.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_GenericWrapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_7_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_peakpicking.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/index.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/TOPP_tutorial.pdf -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/OpenMS_tutorial.pdf make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_install -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0//usr/lib/i386-linux-gnu cp --reflink=auto -a ./debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/libopenms2.6.0//usr/lib/i386-linux-gnu/ install -m0755 -d debian/libopenms-dev//usr/share/openms cp --reflink=auto -a debian/tmp/usr/share/openms/cmake debian/libopenms-dev//usr/share/openms/ install -m0755 -d debian/libopenms-dev/usr/include cp --reflink=auto -a debian/tmp/usr/include/OpenMS/OpenMS debian/libopenms-dev/usr/include/ install -m0755 -d debian/topp//usr/bin cp --reflink=auto -a debian/tmp/usr/bin/AccurateMassSearch debian/tmp/usr/bin/AssayGeneratorMetabo debian/tmp/usr/bin/BaselineFilter debian/tmp/usr/bin/CVInspector debian/tmp/usr/bin/ClusterMassTraces debian/tmp/usr/bin/ClusterMassTracesByPrecursor debian/tmp/usr/bin/CometAdapter debian/tmp/usr/bin/CompNovo debian/tmp/usr/bin/CompNovoCID debian/tmp/usr/bin/ConsensusID debian/tmp/usr/bin/ConsensusMapNormalizer debian/tmp/usr/bin/CruxAdapter debian/tmp/usr/bin/DTAExtractor debian/tmp/usr/bin/DatabaseFilter debian/tmp/usr/bin/DatabaseSuitability debian/tmp/usr/bin/DeMeanderize debian/tmp/usr/bin/Decharger debian/tmp/usr/bin/DecoyDatabase debian/tmp/usr/bin/Digestor debian/tmp/usr/bin/DigestorMotif debian/tmp/usr/bin/EICExtractor debian/tmp/usr/bin/ERPairFinder debian/tmp/usr/bin/Epifany debian/tmp/usr/bin/ExecutePipeline debian/tmp/usr/bin/ExternalCalibration debian/tmp/usr/bin/FFEval debian/tmp/usr/bin/FalseDiscoveryRate debian/tmp/usr/bin/FeatureFinderCentroided debian/tmp/usr/bin/FeatureFinderIdentification debian/tmp/usr/bin/FeatureFinderIsotopeWavelet debian/tmp/usr/bin/FeatureFinderMRM debian/tmp/usr/bin/FeatureFinderMetabo debian/tmp/usr/bin/FeatureFinderMetaboIdent debian/tmp/usr/bin/FeatureFinderMultiplex debian/tmp/usr/bin/FeatureFinderSuperHirn debian/tmp/usr/bin/FeatureLinkerLabeled debian/tmp/usr/bin/FeatureLinkerUnlabeled debian/tmp/usr/bin/FeatureLinkerUnlabeledKD debian/tmp/usr/bin/FeatureLinkerUnlabeledQT debian/tmp/usr/bin/FidoAdapter debian/tmp/usr/bin/FileConverter debian/tmp/usr/bin/FileFilter debian/tmp/usr/bin/FileInfo debian/tmp/usr/bin/FileMerger debian/tmp/usr/bin/FuzzyDiff debian/tmp/usr/bin/GNPSExport debian/tmp/usr/bin/GenericWrapper debian/tmp/usr/bin/HighResPrecursorMassCorrector debian/tmp/usr/bin/IDConflictResolver debian/tmp/usr/bin/IDDecoyProbability debian/tmp/usr/bin/IDExtractor debian/tmp/usr/bin/IDFileConverter debian/tmp/usr/bin/IDFilter debian/tmp/usr/bin/IDMapper debian/tmp/usr/bin/IDMassAccuracy debian/tmp/usr/bin/IDMerger debian/tmp/usr/bin/IDPosteriorErrorProbability debian/tmp/usr/bin/IDRTCalibration debian/tmp/usr/bin/IDRipper debian/tmp/usr/bin/IDScoreSwitcher debian/tmp/usr/bin/IDSplitter debian/tmp/usr/bin/INIFileEditor debian/tmp/usr/bin/INIUpdater debian/tmp/usr/bin/ImageCreator debian/tmp/usr/bin/InclusionExclusionListCreator debian/tmp/usr/bin/InspectAdapter debian/tmp/usr/bin/InternalCalibration debian/tmp/usr/bin/IsobaricAnalyzer debian/tmp/usr/bin/LabeledEval debian/tmp/usr/bin/LuciphorAdapter debian/tmp/usr/bin/MRMMapper debian/tmp/usr/bin/MRMPairFinder debian/tmp/usr/bin/MRMTransitionGroupPicker debian/tmp/usr/bin/MSFraggerAdapter debian/tmp/usr/bin/MSGFPlusAdapter debian/tmp/usr/bin/MSSimulator debian/tmp/usr/bin/MSstatsConverter debian/tmp/usr/bin/MaRaClusterAdapter debian/tmp/usr/bin/MapAlignerIdentification debian/tmp/usr/bin/MapAlignerPoseClustering debian/tmp/usr/bin/MapAlignerSpectrum debian/tmp/usr/bin/MapAlignerTreeGuided debian/tmp/usr/bin/MapNormalizer debian/tmp/usr/bin/MapRTTransformer debian/tmp/usr/bin/MapStatistics debian/tmp/usr/bin/MascotAdapter debian/tmp/usr/bin/MascotAdapterOnline debian/tmp/usr/bin/MassCalculator debian/tmp/usr/bin/MassTraceExtractor debian/tmp/usr/bin/MetaProSIP debian/tmp/usr/bin/MetaboliteAdductDecharger debian/tmp/usr/bin/MetaboliteSpectralMatcher debian/tmp/usr/bin/MultiplexResolver debian/tmp/usr/bin/MyriMatchAdapter debian/tmp/usr/bin/MzMLSplitter debian/tmp/usr/bin/MzTabExporter debian/tmp/usr/bin/NoiseFilterGaussian debian/tmp/usr/bin/NoiseFilterSGolay debian/tmp/usr/bin/NovorAdapter debian/tmp/usr/bin/NucleicAcidSearchEngine debian/tmp/usr/bin/OMSSAAdapter debian/tmp/usr/bin/OpenMSInfo debian/tmp/usr/bin/OpenPepXL debian/tmp/usr/bin/OpenPepXLLF debian/tmp/usr/bin/OpenSwathAnalyzer debian/tmp/usr/bin/OpenSwathAssayGenerator debian/tmp/usr/bin/OpenSwathChromatogramExtractor debian/tmp/usr/bin/OpenSwathConfidenceScoring debian/tmp/usr/bin/OpenSwathDIAPreScoring debian/tmp/usr/bin/OpenSwathDecoyGenerator debian/tmp/usr/bin/OpenSwathFeatureXMLToTSV debian/tmp/usr/bin/OpenSwathFileSplitter debian/tmp/usr/bin/OpenSwathMzMLFileCacher debian/tmp/usr/bin/OpenSwathRTNormalizer debian/tmp/usr/bin/OpenSwathRewriteToFeatureXML debian/tmp/usr/bin/OpenSwathWorkflow debian/tmp/usr/bin/PSMFeatureExtractor debian/tmp/usr/bin/PTModel debian/tmp/usr/bin/PTPredict debian/tmp/usr/bin/PeakPickerHiRes debian/tmp/usr/bin/PeakPickerIterative debian/tmp/usr/bin/PeakPickerWavelet debian/tmp/usr/bin/PepNovoAdapter debian/tmp/usr/bin/PeptideIndexer debian/tmp/usr/bin/PercolatorAdapter debian/tmp/usr/bin/PhosphoScoring debian/tmp/usr/bin/PrecursorIonSelector debian/tmp/usr/bin/PrecursorMassCorrector debian/tmp/usr/bin/ProteinInference debian/tmp/usr/bin/ProteinQuantifier debian/tmp/usr/bin/ProteinResolver debian/tmp/usr/bin/ProteomicsLFQ debian/tmp/usr/bin/QCCalculator debian/tmp/usr/bin/QCEmbedder debian/tmp/usr/bin/QCExporter debian/tmp/usr/bin/QCExtractor debian/tmp/usr/bin/QCImporter debian/tmp/usr/bin/QCMerger debian/tmp/usr/bin/QCShrinker debian/tmp/usr/bin/QualityControl debian/tmp/usr/bin/RNADigestor debian/tmp/usr/bin/RNAMassCalculator debian/tmp/usr/bin/RNPxlSearch debian/tmp/usr/bin/RNPxlXICFilter debian/tmp/usr/bin/RTEvaluation debian/tmp/usr/bin/RTModel debian/tmp/usr/bin/RTPredict debian/tmp/usr/bin/Resampler debian/tmp/usr/bin/SeedListGenerator debian/tmp/usr/bin/SemanticValidator debian/tmp/usr/bin/SequenceCoverageCalculator debian/tmp/usr/bin/SimpleSearchEngine debian/tmp/usr/bin/SiriusAdapter debian/tmp/usr/bin/SpecLibCreator debian/tmp/usr/bin/SpecLibSearcher debian/tmp/usr/bin/SpectraFilterBernNorm debian/tmp/usr/bin/SpectraFilterMarkerMower debian/tmp/usr/bin/SpectraFilterNLargest debian/tmp/usr/bin/SpectraFilterNormalizer debian/tmp/usr/bin/SpectraFilterParentPeakMower debian/tmp/usr/bin/SpectraFilterScaler debian/tmp/usr/bin/SpectraFilterSqrtMower debian/tmp/usr/bin/SpectraFilterThresholdMower debian/tmp/usr/bin/SpectraFilterWindowMower debian/tmp/usr/bin/SpectraMerger debian/tmp/usr/bin/SpectraSTSearchAdapter debian/tmp/usr/bin/StaticModification debian/tmp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/tmp/usr/bin/SwathWizard debian/tmp/usr/bin/TICCalculator debian/tmp/usr/bin/TOFCalibration debian/tmp/usr/bin/TOPPAS debian/tmp/usr/bin/TOPPView debian/tmp/usr/bin/TargetedFileConverter debian/tmp/usr/bin/TextExporter debian/tmp/usr/bin/TransformationEvaluation debian/tmp/usr/bin/XFDR debian/tmp/usr/bin/XMLValidator debian/tmp/usr/bin/XTandemAdapter debian/topp//usr/bin/ install -m0755 -d debian/topp/usr/share/applications cp --reflink=auto -a debian/tmp/usr/share/openms/DESKTOP/TOPPAS.desktop debian/tmp/usr/share/openms/DESKTOP/TOPPView.desktop debian/topp/usr/share/applications/ install -m0755 -d debian/topp/usr/share/metainfo cp --reflink=auto -a debian/tmp/usr/share/openms/DESKTOP/TOPPAS.appdata.xml debian/tmp/usr/share/openms/DESKTOP/TOPPView.appdata.xml debian/topp/usr/share/metainfo/ install -m0755 -d debian/topp/usr/share/pixmaps cp --reflink=auto -a ./debian/TOPPAS.xpm ./debian/TOPPView.xpm debian/topp/usr/share/pixmaps/ install -m0755 -d debian/openms-common//usr/share/openms cp --reflink=auto -a debian/tmp/usr/share/openms/CHEMISTRY debian/tmp/usr/share/openms/CV debian/tmp/usr/share/openms/DESKTOP debian/tmp/usr/share/openms/GUISTYLE debian/tmp/usr/share/openms/IDPool debian/tmp/usr/share/openms/MAPPING debian/tmp/usr/share/openms/PIP debian/tmp/usr/share/openms/SCHEMAS debian/tmp/usr/share/openms/SCRIPTS debian/tmp/usr/share/openms/TOOLS debian/tmp/usr/share/openms/XSL debian/openms-common//usr/share/openms/ install -m0755 -d debian/openms-doc/usr/share/doc/openms cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/html ./debian/tmp/usr/share/openms/examples debian/openms-doc/usr/share/doc/openms/ install -m0755 -d debian/openms-doc/usr/share/doc/openms/html cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/index.html debian/openms-doc/usr/share/doc/openms/html/ install -m0755 -d debian/openms-doc/usr/share/doc/openms/tutorials cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/OpenMS_tutorial.pdf ./debian/tmp/usr/share/doc/openms/TOPP_tutorial.pdf debian/openms-doc/usr/share/doc/openms/tutorials/ dh_installdocs -O--buildsystem=cmake -O--no-parallel dh_installdocs: warning: Could not parse openms-doc.doc-base.topp-tutorial for doc-base Document id; skipping install -m0755 -d debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0 install -p -m0644 debian/copyright debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/copyright install -m0755 -d debian/libopenms-dev/usr/share/doc/libopenms-dev install -p -m0644 debian/copyright debian/libopenms-dev/usr/share/doc/libopenms-dev/copyright install -m0755 -d debian/topp/usr/share/doc/topp install -p -m0644 debian/copyright debian/topp/usr/share/doc/topp/copyright install -m0755 -d debian/openms-common/usr/share/doc/openms-common install -p -m0644 debian/copyright debian/openms-common/usr/share/doc/openms-common/copyright install -m0755 -d debian/openms-doc/usr/share/doc/openms-doc install -p -m0644 debian/copyright debian/openms-doc/usr/share/doc/openms-doc/copyright install -m0755 -d debian/openms-doc/usr/share/doc-base/ install -p -m0644 debian/openms-doc.doc-base.libopenms-tutorial debian/openms-doc/usr/share/doc-base/openms-doc.libopenms-documentation install -m0755 -d debian/openms/usr/share/doc/openms install -m0755 -d debian/openms/usr/share/doc/openms cp --reflink=auto -a ./AUTHORS debian/openms/usr/share/doc/openms chown -R 0:0 debian/openms/usr/share/doc chmod -R u\+rw,go=rX debian/openms/usr/share/doc install -p -m0644 debian/copyright debian/openms/usr/share/doc/openms/copyright dh_installchangelogs -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms-dev/usr/share/doc/libopenms-dev install -p -m0644 debian/.debhelper/generated/libopenms-dev/dh_installchangelogs.dch.trimmed debian/libopenms-dev/usr/share/doc/libopenms-dev/changelog.Debian install -p -m0644 ./CHANGELOG debian/libopenms-dev/usr/share/doc/libopenms-dev/changelog install -m0755 -d debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0 install -p -m0644 debian/.debhelper/generated/libopenms2.6.0/dh_installchangelogs.dch.trimmed debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/changelog.Debian install -p -m0644 ./CHANGELOG debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/changelog install -m0755 -d debian/openms-common/usr/share/doc/openms-common install -p -m0644 debian/.debhelper/generated/openms-common/dh_installchangelogs.dch.trimmed debian/openms-common/usr/share/doc/openms-common/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms-common/usr/share/doc/openms-common/changelog install -m0755 -d debian/topp/usr/share/doc/topp install -p -m0644 debian/.debhelper/generated/topp/dh_installchangelogs.dch.trimmed debian/topp/usr/share/doc/topp/changelog.Debian install -p -m0644 ./CHANGELOG debian/topp/usr/share/doc/topp/changelog install -m0755 -d debian/openms/usr/share/doc/openms install -p -m0644 debian/.debhelper/generated/openms/dh_installchangelogs.dch.trimmed debian/openms/usr/share/doc/openms/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms/usr/share/doc/openms/changelog install -m0755 -d debian/openms-doc/usr/share/doc/openms-doc install -p -m0644 debian/.debhelper/generated/openms-doc/dh_installchangelogs.dch.trimmed debian/openms-doc/usr/share/doc/openms-doc/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms-doc/usr/share/doc/openms-doc/changelog dh_installexamples -O--buildsystem=cmake -O--no-parallel dh_installman -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/man/man3/ install -p -m0644 ./debian/libopenms.3 debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 install -m0755 -d debian/topp/usr/share/man/man1/ install -p -m0644 ./debian/topp.1 debian/topp/usr/share/man/man1/topp.1 install -m0755 -d debian/openms-common/usr/share/man/man7/ install -p -m0644 ./debian/openms-common.7 debian/openms-common/usr/share/man/man7/openms-common.7 install -m0755 -d debian/openms/usr/share/man/man7/ install -p -m0644 ./debian/openms.7 debian/openms/usr/share/man/man7/openms.7 install -m0755 -d debian/openms-doc/usr/share/man/man7/ install -p -m0644 ./debian/openms-doc.7 debian/openms-doc/usr/share/man/man7/openms-doc.7 man-recode --to-code UTF-8 --suffix .dh-new debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 man-recode --to-code UTF-8 --suffix .dh-new debian/topp/usr/share/man/man1/topp.1 man-recode --to-code UTF-8 --suffix .dh-new debian/openms-common/usr/share/man/man7/openms-common.7 man-recode --to-code UTF-8 --suffix .dh-new debian/openms-doc/usr/share/man/man7/openms-doc.7 man-recode --to-code UTF-8 --suffix .dh-new debian/openms/usr/share/man/man7/openms.7 mv debian/libopenms2.6.0/usr/share/man/man3/libopenms.3.dh-new debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 chmod 0644 -- debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 mv debian/openms-doc/usr/share/man/man7/openms-doc.7.dh-new debian/openms-doc/usr/share/man/man7/openms-doc.7 chmod 0644 -- debian/openms-doc/usr/share/man/man7/openms-doc.7 mv debian/openms/usr/share/man/man7/openms.7.dh-new debian/openms/usr/share/man/man7/openms.7 chmod 0644 -- debian/openms/usr/share/man/man7/openms.7 mv debian/topp/usr/share/man/man1/topp.1.dh-new debian/topp/usr/share/man/man1/topp.1 chmod 0644 -- debian/topp/usr/share/man/man1/topp.1 mv debian/openms-common/usr/share/man/man7/openms-common.7.dh-new debian/openms-common/usr/share/man/man7/openms-common.7 chmod 0644 -- debian/openms-common/usr/share/man/man7/openms-common.7 dh_installcatalogs -O--buildsystem=cmake -O--no-parallel dh_installcron -O--buildsystem=cmake -O--no-parallel dh_installdebconf -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN dh_installemacsen -O--buildsystem=cmake -O--no-parallel dh_installifupdown -O--buildsystem=cmake -O--no-parallel dh_installinfo -O--buildsystem=cmake -O--no-parallel dh_installinit -O--buildsystem=cmake -O--no-parallel dh_installsystemd -O--buildsystem=cmake -O--no-parallel dh_installsystemduser -O--buildsystem=cmake -O--no-parallel dh_installmenu -O--buildsystem=cmake -O--no-parallel dh_installmime -O--buildsystem=cmake -O--no-parallel dh_installmodules -O--buildsystem=cmake -O--no-parallel dh_installlogcheck -O--buildsystem=cmake -O--no-parallel dh_installlogrotate -O--buildsystem=cmake -O--no-parallel dh_installpam -O--buildsystem=cmake -O--no-parallel dh_installppp -O--buildsystem=cmake -O--no-parallel dh_installudev -O--buildsystem=cmake -O--no-parallel dh_installgsettings -O--buildsystem=cmake -O--no-parallel dh_installinitramfs -O--buildsystem=cmake -O--no-parallel dh_installalternatives -O--buildsystem=cmake -O--no-parallel dh_bugfiles -O--buildsystem=cmake -O--no-parallel dh_ucf -O--buildsystem=cmake -O--no-parallel dh_lintian -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/lintian/overrides install -p -m0644 debian/libopenms2.6.0.lintian-overrides debian/libopenms2.6.0/usr/share/lintian/overrides/libopenms2.6.0 install -m0755 -d debian/topp/usr/share/lintian/overrides install -p -m0644 debian/topp.lintian-overrides debian/topp/usr/share/lintian/overrides/topp dh_icons -O--buildsystem=cmake -O--no-parallel dh_perl -O--buildsystem=cmake -O--no-parallel dh_usrlocal -O--buildsystem=cmake -O--no-parallel dh_link -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2 ln -s libSuperHirn.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2 ln -s libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2 ln -s libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2 ln -s libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2 install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libSuperHirn.so ln -s libSuperHirn.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libSuperHirn.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so ln -s libOpenSwathAlgo.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS_GUI.so ln -s libOpenMS_GUI.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS_GUI.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS.so ln -s libOpenMS.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS.so install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/rules.1 ln -s topp.1 debian/topp/usr/share/man/man1/rules.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms-dev.links.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms-dev.links.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 ln -s topp.1 debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 dh_installwm -O--buildsystem=cmake -O--no-parallel dh_installxfonts -O--buildsystem=cmake -O--no-parallel dh_strip_nondeterminism -O--buildsystem=cmake -O--no-parallel Using 1703341241 as canonical time Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_results_2d.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_7_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_5_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_example_merger.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/SILACAnalyzer_algorithm.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_pp_picked.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_Ecoli_Identification.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_hd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_g.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_6_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/bc_sd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_9_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_9.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_f.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_noisefilter.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_4.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_s.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_example_profile_data_processing.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_bd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_ad.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/splitbard.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_Quantitation.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_a.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Terms_Map.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_2_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_1.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_h.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_0_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_labeled_quant.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_4_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/SwathWizard.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_parameters.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/bc_s.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_results_3d.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/OpenMS_overview.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_statistics.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_3.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Terms_Spectrum.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_run_options.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_qualitycontrol.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_hd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_consensus_id.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_1D.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/INIFileEditor.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_h.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/sync_on.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Spectrum3DWidget.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/OpenMS_75x55_transparent.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Kernel_DataPoints.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_baseline_filtered.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_b.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_7.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_menu.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_labelfree_quant.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_fd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_3_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_6.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_sd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_0.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_baseline.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_raw_data.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/closed.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Spectrum2DWidget.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/MetaDataBrowser.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_alignment.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_icons.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_help.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_parts.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_5.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_simple_example.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/sync_off.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_ff_centroided.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_8.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_8_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_edges.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_noisefilter_filtered.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_1_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/splitbar.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_2.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=cmake -O--no-parallel cd debian/libopenms2.6.0 cd debian/libopenms-dev cd debian/topp cd debian/openms-common cd debian/openms-doc cd debian/openms chmod a-x usr/share/doc/libopenms-dev/changelog usr/share/doc/libopenms-dev/changelog.Debian chmod a-x usr/share/doc/openms-common/changelog usr/share/doc/openms-common/changelog.Debian usr/share/man/man7/openms-common.7 chmod a-x usr/share/doc/openms/changelog usr/share/doc/openms/changelog.Debian usr/share/man/man7/openms.7 chmod a-x usr/share/doc/libopenms2.6.0/changelog usr/share/doc/libopenms2.6.0/changelog.Debian usr/share/man/man3/libopenms.3 chmod a-x usr/share/doc/topp/changelog usr/share/doc/topp/changelog.Debian usr/share/man/man1/topp.1 gzip -9nf usr/share/doc/libopenms-dev/changelog usr/share/doc/libopenms-dev/changelog.Debian gzip -9nf usr/share/doc/openms-common/changelog usr/share/doc/openms-common/changelog.Debian usr/share/man/man7/openms-common.7 gzip -9nf usr/share/doc/libopenms2.6.0/changelog usr/share/doc/libopenms2.6.0/changelog.Debian usr/share/man/man3/libopenms.3 gzip -9nf usr/share/doc/openms/changelog usr/share/doc/openms/changelog.Debian usr/share/man/man7/openms.7 gzip -9nf usr/share/doc/topp/changelog usr/share/doc/topp/changelog.Debian usr/share/man/man1/topp.1 cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/topp/usr/share/man/man1/libopenms-dev.links.1 debian/topp/usr/share/man/man1/libopenms-dev.links.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms-dev.links.1.gz rm -f debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1.gz rm -f debian/topp/usr/share/man/man1/rules.1 debian/topp/usr/share/man/man1/rules.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/rules.1.gz rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 debian/topp/usr/share/man/man1/libopenms2.6.0.links.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms2.6.0.links.1.gz rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 debian/topp/usr/share/man/man1/libopenms2.6.0.install.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms2.6.0.install.1.gz chmod a-x usr/share/doc/openms-doc/changelog usr/share/doc/openms-doc/changelog.Debian usr/share/doc/openms/tutorials/OpenMS_tutorial.pdf usr/share/doc/openms/tutorials/TOPP_tutorial.pdf usr/share/man/man7/openms-doc.7 gzip -9nf usr/share/doc/openms-doc/changelog usr/share/doc/openms-doc/changelog.Debian usr/share/doc/openms/tutorials/OpenMS_tutorial.pdf usr/share/doc/openms/tutorials/TOPP_tutorial.pdf usr/share/man/man7/openms-doc.7 cd '/build/reproducible-path/openms-2.6.0+cleaned1' dh_fixperms -O--buildsystem=cmake -O--no-parallel find debian/libopenms2.6.0 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libopenms-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/topp -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms-common -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/openms/usr/share/doc -type f -a -true -a ! -regex 'debian/openms/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0/usr/share/doc -type f -a -true -a ! -regex 'debian/libopenms2.6.0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms2.6.0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0/usr/share/man debian/libopenms2.6.0/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/topp ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/openms-common/usr/share/doc -type f -a -true -a ! -regex 'debian/openms-common/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/share/doc -type f -a -true -a ! -regex 'debian/topp/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/topp/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms-common/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/share/man debian/topp/usr/share/applications debian/topp/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libopenms-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/openms-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libopenms-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/openms-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/openms-doc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -O--buildsystem=cmake -O--no-parallel dh_missing: warning: usr/lib/i386-linux-gnu/libOpenMS.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libOpenMS_GUI.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libOpenSwathAlgo.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libSuperHirn.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/libOpenMS.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0") dh_missing: warning: usr/lib/libOpenMS_GUI.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0") dh_missing: warning: usr/lib/libOpenSwathAlgo.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0") dh_missing: warning: usr/lib/libSuperHirn.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0") dh_missing: warning: usr/share/openms/THIRDPARTY/ReadMe.txt exists in debian/tmp but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 with: * usr/lib/libOpenMS.so.2.6.0 in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: libopenms-dev (2), libopenms2.6.0 (4), openms (0), openms-common (11), openms-doc (5), topp (185) * dh_installdocs: libopenms-dev (0), libopenms2.6.0 (0), openms (1), openms-common (0), openms-doc (0), topp (0) * dh_installexamples: libopenms-dev (0), libopenms2.6.0 (0), openms (0), openms-common (0), openms-doc (0), topp (0) * dh_installinfo: libopenms-dev (0), libopenms2.6.0 (0), openms (0), openms-common (0), openms-doc (0), topp (0) * dh_installman: libopenms-dev (0), libopenms2.6.0 (1), openms (1), openms-common (1), openms-doc (1), topp (1) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "i386-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug -- debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/topp/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug -- debian/topp/usr/bin/AccurateMassSearch debian/topp/usr/bin/AssayGeneratorMetabo debian/topp/usr/bin/BaselineFilter debian/topp/usr/bin/CVInspector debian/topp/usr/bin/ClusterMassTraces debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/topp/usr/bin/CometAdapter debian/topp/usr/bin/CompNovo debian/topp/usr/bin/CompNovoCID debian/topp/usr/bin/ConsensusID debian/topp/usr/bin/ConsensusMapNormalizer debian/topp/usr/bin/CruxAdapter debian/topp/usr/bin/DTAExtractor debian/topp/usr/bin/DatabaseFilter debian/topp/usr/bin/DatabaseSuitability debian/topp/usr/bin/DeMeanderize debian/topp/usr/bin/Decharger debian/topp/usr/bin/DecoyDatabase debian/topp/usr/bin/Digestor debian/topp/usr/bin/DigestorMotif debian/topp/usr/bin/EICExtractor debian/topp/usr/bin/ERPairFinder debian/topp/usr/bin/Epifany debian/topp/usr/bin/ExecutePipeline debian/topp/usr/bin/ExternalCalibration debian/topp/usr/bin/FFEval debian/topp/usr/bin/FalseDiscoveryRate debian/topp/usr/bin/FeatureFinderCentroided debian/topp/usr/bin/FeatureFinderIdentification debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/topp/usr/bin/FeatureFinderMRM debian/topp/usr/bin/FeatureFinderMetabo debian/topp/usr/bin/FeatureFinderMetaboIdent debian/topp/usr/bin/FeatureFinderMultiplex debian/topp/usr/bin/FeatureFinderSuperHirn debian/topp/usr/bin/FeatureLinkerLabeled debian/topp/usr/bin/FeatureLinkerUnlabeled debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/topp/usr/bin/FidoAdapter debian/topp/usr/bin/FileConverter debian/topp/usr/bin/FileFilter debian/topp/usr/bin/FileInfo debian/topp/usr/bin/FileMerger debian/topp/usr/bin/FuzzyDiff debian/topp/usr/bin/GNPSExport debian/topp/usr/bin/GenericWrapper debian/topp/usr/bin/HighResPrecursorMassCorrector debian/topp/usr/bin/IDConflictResolver debian/topp/usr/bin/IDDecoyProbability debian/topp/usr/bin/IDExtractor debian/topp/usr/bin/IDFileConverter debian/topp/usr/bin/IDFilter debian/topp/usr/bin/IDMapper debian/topp/usr/bin/IDMassAccuracy debian/topp/usr/bin/IDMerger debian/topp/usr/bin/IDPosteriorErrorProbability debian/topp/usr/bin/IDRTCalibration debian/topp/usr/bin/IDRipper debian/topp/usr/bin/IDScoreSwitcher debian/topp/usr/bin/IDSplitter debian/topp/usr/bin/INIFileEditor debian/topp/usr/bin/INIUpdater debian/topp/usr/bin/ImageCreator debian/topp/usr/bin/InclusionExclusionListCreator debian/topp/usr/bin/InspectAdapter debian/topp/usr/bin/InternalCalibration debian/topp/usr/bin/IsobaricAnalyzer debian/topp/usr/bin/LabeledEval debian/topp/usr/bin/LuciphorAdapter debian/topp/usr/bin/MRMMapper debian/topp/usr/bin/MRMPairFinder debian/topp/usr/bin/MRMTransitionGroupPicker debian/topp/usr/bin/MSFraggerAdapter debian/topp/usr/bin/MSGFPlusAdapter debian/topp/usr/bin/MSSimulator debian/topp/usr/bin/MSstatsConverter debian/topp/usr/bin/MaRaClusterAdapter debian/topp/usr/bin/MapAlignerIdentification debian/topp/usr/bin/MapAlignerPoseClustering debian/topp/usr/bin/MapAlignerSpectrum debian/topp/usr/bin/MapAlignerTreeGuided debian/topp/usr/bin/MapNormalizer debian/topp/usr/bin/MapRTTransformer debian/topp/usr/bin/MapStatistics debian/topp/usr/bin/MascotAdapter debian/topp/usr/bin/MascotAdapterOnline debian/topp/usr/bin/MassCalculator debian/topp/usr/bin/MassTraceExtractor debian/topp/usr/bin/MetaProSIP debian/topp/usr/bin/MetaboliteAdductDecharger debian/topp/usr/bin/MetaboliteSpectralMatcher debian/topp/usr/bin/MultiplexResolver debian/topp/usr/bin/MyriMatchAdapter debian/topp/usr/bin/MzMLSplitter debian/topp/usr/bin/MzTabExporter debian/topp/usr/bin/NoiseFilterGaussian debian/topp/usr/bin/NoiseFilterSGolay debian/topp/usr/bin/NovorAdapter debian/topp/usr/bin/NucleicAcidSearchEngine debian/topp/usr/bin/OMSSAAdapter debian/topp/usr/bin/OpenMSInfo debian/topp/usr/bin/OpenPepXL debian/topp/usr/bin/OpenPepXLLF debian/topp/usr/bin/OpenSwathAnalyzer debian/topp/usr/bin/OpenSwathAssayGenerator debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/topp/usr/bin/OpenSwathConfidenceScoring debian/topp/usr/bin/OpenSwathDIAPreScoring debian/topp/usr/bin/OpenSwathDecoyGenerator debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/topp/usr/bin/OpenSwathFileSplitter debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/topp/usr/bin/OpenSwathRTNormalizer debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/topp/usr/bin/OpenSwathWorkflow debian/topp/usr/bin/PSMFeatureExtractor debian/topp/usr/bin/PTModel debian/topp/usr/bin/PTPredict debian/topp/usr/bin/PeakPickerHiRes debian/topp/usr/bin/PeakPickerIterative debian/topp/usr/bin/PeakPickerWavelet debian/topp/usr/bin/PepNovoAdapter debian/topp/usr/bin/PeptideIndexer debian/topp/usr/bin/PercolatorAdapter debian/topp/usr/bin/PhosphoScoring debian/topp/usr/bin/PrecursorIonSelector debian/topp/usr/bin/PrecursorMassCorrector debian/topp/usr/bin/ProteinInference debian/topp/usr/bin/ProteinQuantifier debian/topp/usr/bin/ProteinResolver debian/topp/usr/bin/ProteomicsLFQ debian/topp/usr/bin/QCCalculator debian/topp/usr/bin/QCEmbedder debian/topp/usr/bin/QCExporter debian/topp/usr/bin/QCExtractor debian/topp/usr/bin/QCImporter debian/topp/usr/bin/QCMerger debian/topp/usr/bin/QCShrinker debian/topp/usr/bin/QualityControl debian/topp/usr/bin/RNADigestor debian/topp/usr/bin/RNAMassCalculator debian/topp/usr/bin/RNPxlSearch debian/topp/usr/bin/RNPxlXICFilter debian/topp/usr/bin/RTEvaluation debian/topp/usr/bin/RTModel debian/topp/usr/bin/RTPredict debian/topp/usr/bin/Resampler debian/topp/usr/bin/SeedListGenerator debian/topp/usr/bin/SemanticValidator debian/topp/usr/bin/SequenceCoverageCalculator debian/topp/usr/bin/SimpleSearchEngine debian/topp/usr/bin/SiriusAdapter debian/topp/usr/bin/SpecLibCreator debian/topp/usr/bin/SpecLibSearcher debian/topp/usr/bin/SpectraFilterBernNorm debian/topp/usr/bin/SpectraFilterMarkerMower debian/topp/usr/bin/SpectraFilterNLargest debian/topp/usr/bin/SpectraFilterNormalizer debian/topp/usr/bin/SpectraFilterParentPeakMower debian/topp/usr/bin/SpectraFilterScaler debian/topp/usr/bin/SpectraFilterSqrtMower debian/topp/usr/bin/SpectraFilterThresholdMower debian/topp/usr/bin/SpectraFilterWindowMower debian/topp/usr/bin/SpectraMerger debian/topp/usr/bin/SpectraSTSearchAdapter debian/topp/usr/bin/StaticModification debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/topp/usr/bin/SwathWizard debian/topp/usr/bin/TICCalculator debian/topp/usr/bin/TOFCalibration debian/topp/usr/bin/TOPPAS debian/topp/usr/bin/TOPPView debian/topp/usr/bin/TargetedFileConverter debian/topp/usr/bin/TextExporter debian/topp/usr/bin/TransformationEvaluation debian/topp/usr/bin/XFDR debian/topp/usr/bin/XMLValidator debian/topp/usr/bin/XTandemAdapter objcopy --compress-debug-sections debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug chmod 0644 -- debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug chown 0:0 -- debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug dwz: debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0: DWARF compression not beneficial - old size 323398246 new size 324945945 objcopy --compress-debug-sections debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug chmod 0644 -- debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug chown 0:0 -- debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug dh_strip -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/HighResPrecursorMassCorrector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/HighResPrecursorMassCorrector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug debian/topp/usr/bin/HighResPrecursorMassCorrector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FileConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug debian/topp/usr/bin/FileConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMTransitionGroupPicker debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MRMTransitionGroupPicker objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug debian/topp/usr/bin/MRMTransitionGroupPicker chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNPxlXICFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNPxlXICFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug debian/topp/usr/bin/RNPxlXICFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinResolver objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug debian/topp/usr/bin/ProteinResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QualityControl debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QualityControl objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug debian/topp/usr/bin/QualityControl install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinInference debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinInference objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug debian/topp/usr/bin/ProteinInference install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PSMFeatureExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PSMFeatureExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug debian/topp/usr/bin/PSMFeatureExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/INIFileEditor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/INIFileEditor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug debian/topp/usr/bin/INIFileEditor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterNLargest debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterNLargest objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug debian/topp/usr/bin/SpectraFilterNLargest install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDScoreSwitcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDScoreSwitcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug debian/topp/usr/bin/IDScoreSwitcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDPosteriorErrorProbability debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDPosteriorErrorProbability objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug debian/topp/usr/bin/IDPosteriorErrorProbability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderIdentification debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderIdentification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug debian/topp/usr/bin/FeatureFinderIdentification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MassTraceExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MassTraceExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug debian/topp/usr/bin/MassTraceExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DTAExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DTAExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug debian/topp/usr/bin/DTAExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug debian/topp/usr/bin/QCExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterBernNorm debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterBernNorm objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug debian/topp/usr/bin/SpectraFilterBernNorm install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MultiplexResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MultiplexResolver objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug debian/topp/usr/bin/MultiplexResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathWorkflow debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathWorkflow objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug debian/topp/usr/bin/OpenSwathWorkflow install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Epifany debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/193d999b1c8a8cc1ff0099e3674acae6888494.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/193d999b1c8a8cc1ff0099e3674acae6888494.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/193d999b1c8a8cc1ff0099e3674acae6888494.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/Epifany objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/193d999b1c8a8cc1ff0099e3674acae6888494.debug debian/topp/usr/bin/Epifany install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCMerger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/41c014e30dd53c9fd36cfacf4f9619f1ac3a56.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/41c014e30dd53c9fd36cfacf4f9619f1ac3a56.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/41c014e30dd53c9fd36cfacf4f9619f1ac3a56.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/41c014e30dd53c9fd36cfacf4f9619f1ac3a56.debug debian/topp/usr/bin/QCMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMultiplex debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMultiplex objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug debian/topp/usr/bin/FeatureFinderMultiplex install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CometAdapter 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/26fd1081b09500bda5084d39d04d92178619b5.debug debian/topp/usr/bin/MSSimulator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapRTTransformer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/3303441586040ff6b9e172c2d78145f9bebcfb.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/3303441586040ff6b9e172c2d78145f9bebcfb.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/3303441586040ff6b9e172c2d78145f9bebcfb.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapRTTransformer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/3303441586040ff6b9e172c2d78145f9bebcfb.debug debian/topp/usr/bin/MapRTTransformer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NoiseFilterGaussian debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NoiseFilterGaussian objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug debian/topp/usr/bin/NoiseFilterGaussian install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MyriMatchAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MyriMatchAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug debian/topp/usr/bin/MyriMatchAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/16b7348ea87379abb164c5a1ee39d174c664a6.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/16b7348ea87379abb164c5a1ee39d174c664a6.debug chown 0:0 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/65b46c8713774d8a8a559b5f1254611c1f1847.debug debian/topp/usr/bin/ImageCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/InspectAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/48bf707e6083db29f6fb38f1b6ffc823ba5070.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/48bf707e6083db29f6fb38f1b6ffc823ba5070.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/48bf707e6083db29f6fb38f1b6ffc823ba5070.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/InspectAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/48bf707e6083db29f6fb38f1b6ffc823ba5070.debug debian/topp/usr/bin/InspectAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNPxlSearch debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNPxlSearch objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug debian/topp/usr/bin/RNPxlSearch install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerIdentification debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerIdentification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug debian/topp/usr/bin/MapAlignerIdentification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TransformationEvaluation debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/20f1e9284fb396fba0f826134d128a3619f414.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/20f1e9284fb396fba0f826134d128a3619f414.debug chown 0:0 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/84/4e32774a3da528efe66114914b36aa057c3eb4.debug debian/topp/usr/bin/IDExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/80 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TextExporter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/80/302608c6a2d3ce2915fa2a9f4f0bdb101b8d45.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/80/302608c6a2d3ce2915fa2a9f4f0bdb101b8d45.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/80/302608c6a2d3ce2915fa2a9f4f0bdb101b8d45.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TextExporter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/80/302608c6a2d3ce2915fa2a9f4f0bdb101b8d45.debug debian/topp/usr/bin/TextExporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PrecursorMassCorrector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PrecursorMassCorrector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug debian/topp/usr/bin/PrecursorMassCorrector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeptideIndexer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0e/d3b1c20f702fd61561d931a2c4a0797d4699a5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0e/d3b1c20f702fd61561d931a2c4a0797d4699a5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0e/d3b1c20f702fd61561d931a2c4a0797d4699a5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeptideIndexer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0e/d3b1c20f702fd61561d931a2c4a0797d4699a5.debug debian/topp/usr/bin/PeptideIndexer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileInfo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/e9de160d3dc26531dac0f0bd8701f5fc723e68.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/e9de160d3dc26531dac0f0bd8701f5fc723e68.debug 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/38fa0304b9c7df243c20a74d8ab9990e1a9480.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/38fa0304b9c7df243c20a74d8ab9990e1a9480.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/38fa0304b9c7df243c20a74d8ab9990e1a9480.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ClusterMassTracesByPrecursor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d0/38fa0304b9c7df243c20a74d8ab9990e1a9480.debug debian/topp/usr/bin/ClusterMassTracesByPrecursor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/94 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ExecutePipeline 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objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SeedListGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/9b0dd7e44113cad345db4cd805d4a51904df8e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/9b0dd7e44113cad345db4cd805d4a51904df8e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/9b0dd7e44113cad345db4cd805d4a51904df8e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SeedListGenerator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/9b0dd7e44113cad345db4cd805d4a51904df8e.debug debian/topp/usr/bin/SeedListGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTEvaluation debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b/521f469ad82932422fb00e86799a579b265626.debug chmod 0644 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b4/78b2a22cbe5aeadf060393bcaa770530cd5bc8.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b4/78b2a22cbe5aeadf060393bcaa770530cd5bc8.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b4/78b2a22cbe5aeadf060393bcaa770530cd5bc8.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b4/78b2a22cbe5aeadf060393bcaa770530cd5bc8.debug debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5c81d99596a17cedf20375b8e3fea964b3fae4.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5c81d99596a17cedf20375b8e3fea964b3fae4.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5c81d99596a17cedf20375b8e3fea964b3fae4.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderIsotopeWavelet objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5c81d99596a17cedf20375b8e3fea964b3fae4.debug debian/topp/usr/bin/FeatureFinderIsotopeWavelet install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDConflictResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/e9be788757e1215f5a19cee0a21239927c1a7d.debug chmod 0644 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/d987e2486fca6ae627e84ea20cc73729701ce2.debug debian/topp/usr/bin/ExternalCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCEmbedder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/756e9e6e849707e5be9b9a6452475638a2988c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/756e9e6e849707e5be9b9a6452475638a2988c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/756e9e6e849707e5be9b9a6452475638a2988c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCEmbedder objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/756e9e6e849707e5be9b9a6452475638a2988c.debug debian/topp/usr/bin/QCEmbedder install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCShrinker debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/f2974c5ae9bfc6e1f82d1e16e766217b8df1d4.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/f2974c5ae9bfc6e1f82d1e16e766217b8df1d4.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/f2974c5ae9bfc6e1f82d1e16e766217b8df1d4.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCShrinker objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/f2974c5ae9bfc6e1f82d1e16e766217b8df1d4.debug debian/topp/usr/bin/QCShrinker install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMPairFinder 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debian/topp/usr/bin/InclusionExclusionListCreator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/98e7648c504a0152bdccd71a6df4c361086e0f.debug debian/topp/usr/bin/InclusionExclusionListCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MSGFPlusAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSGFPlusAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug debian/topp/usr/bin/MSGFPlusAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MzMLSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MzMLSplitter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug debian/topp/usr/bin/MzMLSplitter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathDecoyGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathDecoyGenerator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug debian/topp/usr/bin/OpenSwathDecoyGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CompNovo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CompNovo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug debian/topp/usr/bin/CompNovo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/EICExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/EICExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug debian/topp/usr/bin/EICExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OMSSAAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OMSSAAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug debian/topp/usr/bin/OMSSAAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PTPredict debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PTPredict objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug debian/topp/usr/bin/PTPredict install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathDIAPreScoring 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/898aa2af285158568a3e58b17471f723f92d2e.debug debian/topp/usr/bin/MSstatsConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerLabeled debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerLabeled objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug debian/topp/usr/bin/FeatureLinkerLabeled install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathRTNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21/9c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21/9c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21/9c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathRTNormalizer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21/9c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a.debug debian/topp/usr/bin/OpenSwathRTNormalizer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PrecursorIonSelector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7d/670cb60d952abfa5584286b06489f5b32944fe.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7d/670cb60d952abfa5584286b06489f5b32944fe.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7d/670cb60d952abfa5584286b06489f5b32944fe.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PrecursorIonSelector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7d/670cb60d952abfa5584286b06489f5b32944fe.debug debian/topp/usr/bin/PrecursorIonSelector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MassCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MassCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug debian/topp/usr/bin/MassCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterScaler debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/34d615a8e16a3c9c784a8230739cab16b1f1f2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/34d615a8e16a3c9c784a8230739cab16b1f1f2.debug chown 0:0 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/877fef4a4489f33d871ed540eb7f40f2db4bf3.debug debian/topp/usr/bin/QCImporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/LabeledEval debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/09c33e761c669ed4af1b136a93feae11810237.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/09c33e761c669ed4af1b136a93feae11810237.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/09c33e761c669ed4af1b136a93feae11810237.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/LabeledEval objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/09c33e761c669ed4af1b136a93feae11810237.debug debian/topp/usr/bin/LabeledEval install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/InternalCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/7b123939c6e86b7bd51c9fe827ea1f7c5d575e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/7b123939c6e86b7bd51c9fe827ea1f7c5d575e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/7b123939c6e86b7bd51c9fe827ea1f7c5d575e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/InternalCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/7b123939c6e86b7bd51c9fe827ea1f7c5d575e.debug debian/topp/usr/bin/InternalCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PTModel 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--only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathConfidenceScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathConfidenceScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug debian/topp/usr/bin/OpenSwathConfidenceScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SwathWizard debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7e/75f05605f142c18b8f465db3c6285122090618.debug chmod 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3f/5d302ed4b98dc1c4941de2b9e713f1b2f3c16c.debug debian/topp/usr/bin/OpenSwathAssayGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SiriusAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/dca2596ebd8fce9f848b55a4b9e1d3e03b497f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/dca2596ebd8fce9f848b55a4b9e1d3e03b497f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/dca2596ebd8fce9f848b55a4b9e1d3e03b497f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SiriusAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/dca2596ebd8fce9f848b55a4b9e1d3e03b497f.debug debian/topp/usr/bin/SiriusAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/AssayGeneratorMetabo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/6f7e28bfd7f8700f318241744fe98581f54ffe.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/6f7e28bfd7f8700f318241744fe98581f54ffe.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/6f7e28bfd7f8700f318241744fe98581f54ffe.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/AssayGeneratorMetabo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/6f7e28bfd7f8700f318241744fe98581f54ffe.debug debian/topp/usr/bin/AssayGeneratorMetabo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaProSIP 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MascotAdapterOnline debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MascotAdapterOnline objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug debian/topp/usr/bin/MascotAdapterOnline install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileMerger 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/4aaf1ed1fd10aaab01acae3a77748cbb051108.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/4aaf1ed1fd10aaab01acae3a77748cbb051108.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMetaboIdent objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/4aaf1ed1fd10aaab01acae3a77748cbb051108.debug debian/topp/usr/bin/FeatureFinderMetaboIdent install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/41/896c365e13294e1d3dffc7c9a94416081f8f55.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/41/896c365e13294e1d3dffc7c9a94416081f8f55.debug chown 0:0 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ad/e13d5a461884801175b08925d2b89a69442df2.debug debian/topp/usr/bin/FeatureFinderSuperHirn install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/23 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DatabaseSuitability debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/23/d3f0ef9ed280c1cd8f59340bb11626f8577118.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/23/d3f0ef9ed280c1cd8f59340bb11626f8577118.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/23/d3f0ef9ed280c1cd8f59340bb11626f8577118.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DatabaseSuitability objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/23/d3f0ef9ed280c1cd8f59340bb11626f8577118.debug debian/topp/usr/bin/DatabaseSuitability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaboliteAdductDecharger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaboliteAdductDecharger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug debian/topp/usr/bin/MetaboliteAdductDecharger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ConsensusMapNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5ead2d952b4b0aeda421b0daf3146dba0db017.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5ead2d952b4b0aeda421b0daf3146dba0db017.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5ead2d952b4b0aeda421b0daf3146dba0db017.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ConsensusMapNormalizer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/5ead2d952b4b0aeda421b0daf3146dba0db017.debug debian/topp/usr/bin/ConsensusMapNormalizer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ConsensusID debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/65/cf6aaa34f3af57879159dffc030b8a3d86e507.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/65/cf6aaa34f3af57879159dffc030b8a3d86e507.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/65/cf6aaa34f3af57879159dffc030b8a3d86e507.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ConsensusID objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/65/cf6aaa34f3af57879159dffc030b8a3d86e507.debug debian/topp/usr/bin/ConsensusID install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DeMeanderize debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/45a9ebcf1035353a5754f68cc95a237b5558af.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/45a9ebcf1035353a5754f68cc95a237b5558af.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/45a9ebcf1035353a5754f68cc95a237b5558af.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DeMeanderize objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/45a9ebcf1035353a5754f68cc95a237b5558af.debug debian/topp/usr/bin/DeMeanderize install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCExporter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/277f8e473c13094a18a3ced688d92fbcd0e1da.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/277f8e473c13094a18a3ced688d92fbcd0e1da.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/277f8e473c13094a18a3ced688d92fbcd0e1da.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCExporter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/277f8e473c13094a18a3ced688d92fbcd0e1da.debug debian/topp/usr/bin/QCExporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/GNPSExport debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0a/049c021315b2e5ab9580bc47549266765c473c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0a/049c021315b2e5ab9580bc47549266765c473c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0a/049c021315b2e5ab9580bc47549266765c473c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/GNPSExport objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0a/049c021315b2e5ab9580bc47549266765c473c.debug debian/topp/usr/bin/GNPSExport install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinQuantifier debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinQuantifier objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug debian/topp/usr/bin/ProteinQuantifier install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeled debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/1435cb525d7dfe5c058548e3e5184a7c0a853d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/1435cb525d7dfe5c058548e3e5184a7c0a853d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/1435cb525d7dfe5c058548e3e5184a7c0a853d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeled objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/1435cb525d7dfe5c058548e3e5184a7c0a853d.debug debian/topp/usr/bin/FeatureLinkerUnlabeled install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FFEval debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05/d054470384641315d8d18877a71b446045a1ed.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05/d054470384641315d8d18877a71b446045a1ed.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05/d054470384641315d8d18877a71b446045a1ed.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FFEval objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05/d054470384641315d8d18877a71b446045a1ed.debug debian/topp/usr/bin/FFEval install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b/8fd464459d8016b39677dce49b8bfa063d7589.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b/8fd464459d8016b39677dce49b8bfa063d7589.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b/8fd464459d8016b39677dce49b8bfa063d7589.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3b/8fd464459d8016b39677dce49b8bfa063d7589.debug debian/topp/usr/bin/IDFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6a0816a3edf5b104ea7180c146c415c039a155.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6a0816a3edf5b104ea7180c146c415c039a155.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6a0816a3edf5b104ea7180c146c415c039a155.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathMzMLFileCacher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/90/6a0816a3edf5b104ea7180c146c415c039a155.debug debian/topp/usr/bin/OpenSwathMzMLFileCacher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenPepXLLF debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenPepXLLF objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug debian/topp/usr/bin/OpenPepXLLF install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOFCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/9f857213e1830f935e142fe2b6175351b7f97b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/9f857213e1830f935e142fe2b6175351b7f97b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/9f857213e1830f935e142fe2b6175351b7f97b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TOFCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/9f857213e1830f935e142fe2b6175351b7f97b.debug debian/topp/usr/bin/TOFCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/01 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/GenericWrapper debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/01/d0f74f92299e6dd1846fec948f2f64cf35435c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/01/d0f74f92299e6dd1846fec948f2f64cf35435c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/01/d0f74f92299e6dd1846fec948f2f64cf35435c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/GenericWrapper objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/01/d0f74f92299e6dd1846fec948f2f64cf35435c.debug debian/topp/usr/bin/GenericWrapper install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDRTCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/46fd1ee9682151677285c3681c80fd74440a3c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/46fd1ee9682151677285c3681c80fd74440a3c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/46fd1ee9682151677285c3681c80fd74440a3c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDRTCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/46fd1ee9682151677285c3681c80fd74440a3c.debug debian/topp/usr/bin/IDRTCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cb objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MzTabExporter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cb/0b604229b26102c320e3d454935f0cadd07170.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cb/0b604229b26102c320e3d454935f0cadd07170.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cb/0b604229b26102c320e3d454935f0cadd07170.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MzTabExporter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cb/0b604229b26102c320e3d454935f0cadd07170.debug debian/topp/usr/bin/MzTabExporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Digestor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f7/fd0d56f7dd71f460c2af31a6d7388157d9c20a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f7/fd0d56f7dd71f460c2af31a6d7388157d9c20a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f7/fd0d56f7dd71f460c2af31a6d7388157d9c20a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/Digestor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f7/fd0d56f7dd71f460c2af31a6d7388157d9c20a.debug debian/topp/usr/bin/Digestor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathFileSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathFileSplitter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug debian/topp/usr/bin/OpenSwathFileSplitter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraSTSearchAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/9481b60d4c2470ffba1a57a9f6661f070b6907.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/9481b60d4c2470ffba1a57a9f6661f070b6907.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/9481b60d4c2470ffba1a57a9f6661f070b6907.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraSTSearchAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/9481b60d4c2470ffba1a57a9f6661f070b6907.debug debian/topp/usr/bin/SpectraSTSearchAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathAnalyzer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/2995630cbba6a2e11c5ac6d5e4b6f709387d32.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/2995630cbba6a2e11c5ac6d5e4b6f709387d32.debug chown 0:0 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/23bbfa03f78b5018d90aeab64a13673dfbfa2f.debug debian/topp/usr/bin/RNADigestor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FuzzyDiff debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FuzzyDiff objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug debian/topp/usr/bin/FuzzyDiff install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PhosphoScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PhosphoScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug debian/topp/usr/bin/PhosphoScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOPPView debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/2a8656cf2b00f85eb695042c650fc945674eda.debug chmod 0644 -- 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDDecoyProbability objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/55/8c4726e0ae4d0d78265879405b410db28e290f.debug debian/topp/usr/bin/IDDecoyProbability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterThresholdMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterThresholdMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug debian/topp/usr/bin/SpectraFilterThresholdMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenMSInfo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenMSInfo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug debian/topp/usr/bin/OpenMSInfo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MSFraggerAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSFraggerAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug debian/topp/usr/bin/MSFraggerAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NoiseFilterSGolay debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/62887efec6dbe891dbb5a34775183588a5e303.debug chmod 0644 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/11/a2296b1c26ca41d012c8a3d1670bfea881dca4.debug debian/topp/usr/bin/PercolatorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMRM debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMRM objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug debian/topp/usr/bin/FeatureFinderMRM install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NovorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NovorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug debian/topp/usr/bin/NovorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenPepXL debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenPepXL objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug debian/topp/usr/bin/OpenPepXL install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterWindowMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05/d2219c271bd5f61e6f74bc02816a2d35775c4b.debug chmod 0644 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3a/f505e71921cca9342c53598bb33e042cf8e655.debug debian/topp/usr/bin/MapAlignerPoseClustering install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerSpectrum debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerSpectrum objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug debian/topp/usr/bin/MapAlignerSpectrum install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpecLibCreator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpecLibCreator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug debian/topp/usr/bin/SpecLibCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteomicsLFQ 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3d/7566a19a308220be0d36e702f77425b8a9f45e.debug debian/topp/usr/bin/SimpleSearchEngine install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTPredict debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTPredict objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug debian/topp/usr/bin/RTPredict install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeledKD objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug debian/topp/usr/bin/FeatureLinkerUnlabeledKD install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTModel debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTModel objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug debian/topp/usr/bin/RTModel install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XMLValidator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XMLValidator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug debian/topp/usr/bin/XMLValidator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMetabo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMetabo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug debian/topp/usr/bin/FeatureFinderMetabo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeledQT objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug debian/topp/usr/bin/FeatureLinkerUnlabeledQT install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XTandemAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XTandemAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug debian/topp/usr/bin/XTandemAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TICCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TICCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug debian/topp/usr/bin/TICCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IsobaricAnalyzer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IsobaricAnalyzer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug debian/topp/usr/bin/IsobaricAnalyzer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathChromatogramExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug debian/topp/usr/bin/OpenSwathChromatogramExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeakPickerHiRes debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeakPickerHiRes objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug debian/topp/usr/bin/PeakPickerHiRes install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DigestorMotif debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DigestorMotif objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug debian/topp/usr/bin/DigestorMotif install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDFileConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDFileConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug debian/topp/usr/bin/IDFileConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CVInspector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CVInspector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug debian/topp/usr/bin/CVInspector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DatabaseFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DatabaseFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug debian/topp/usr/bin/DatabaseFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaboliteSpectralMatcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaboliteSpectralMatcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug debian/topp/usr/bin/MetaboliteSpectralMatcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MaRaClusterAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MaRaClusterAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug debian/topp/usr/bin/MaRaClusterAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/BaselineFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/BaselineFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug debian/topp/usr/bin/BaselineFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XFDR debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XFDR objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug debian/topp/usr/bin/XFDR install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ERPairFinder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ERPairFinder objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug debian/topp/usr/bin/ERPairFinder install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDMerger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug debian/topp/usr/bin/IDMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathRewriteToFeatureXML objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug debian/topp/usr/bin/OpenSwathRewriteToFeatureXML install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeakPickerWavelet debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeakPickerWavelet objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug debian/topp/usr/bin/PeakPickerWavelet install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterParentPeakMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterParentPeakMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug debian/topp/usr/bin/SpectraFilterParentPeakMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterSqrtMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterSqrtMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug debian/topp/usr/bin/SpectraFilterSqrtMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/LuciphorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/LuciphorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug debian/topp/usr/bin/LuciphorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpecLibSearcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpecLibSearcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug debian/topp/usr/bin/SpecLibSearcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerTreeGuided debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerTreeGuided objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug debian/topp/usr/bin/MapAlignerTreeGuided install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FalseDiscoveryRate debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FalseDiscoveryRate objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug debian/topp/usr/bin/FalseDiscoveryRate install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/topp/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/topp/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/topp/usr/lib/debug install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/share/doc ln -s topp debian/.debhelper/topp/dbgsym-root/usr/share/doc/topp-dbgsym install -m0755 -d debian/.debhelper/topp chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libopenms2.6.0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libopenms2.6.0/usr/lib/debug install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/share/doc ln -s libopenms2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/share/doc/libopenms2.6.0-dbgsym install -m0755 -d debian/.debhelper/libopenms2.6.0 dh_makeshlibs -O--buildsystem=cmake -O--no-parallel rm -f debian/libopenms2.6.0/DEBIAN/shlibs install -m0755 -d debian/libopenms2.6.0/DEBIAN echo "libOpenMS 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libOpenMS_GUI 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libOpenSwathAlgo 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libSuperHirn 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs chmod 0644 -- debian/libopenms2.6.0/DEBIAN/shlibs chown 0:0 -- debian/libopenms2.6.0/DEBIAN/shlibs mv debian/.debhelper/generated/libopenms2.6.0/triggers.new debian/.debhelper/generated/libopenms2.6.0/triggers rm -f debian/libopenms-dev/DEBIAN/shlibs rm -f debian/topp/DEBIAN/shlibs rm -f debian/openms-common/DEBIAN/shlibs rm -f debian/openms-doc/DEBIAN/shlibs rm -f debian/openms/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN dpkg-shlibdeps -Tdebian/libopenms2.6.0.substvars debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 install -m0755 -d debian/topp/DEBIAN dpkg-shlibdeps -Tdebian/topp.substvars debian/topp/usr/bin/HighResPrecursorMassCorrector debian/topp/usr/bin/FileConverter debian/topp/usr/bin/MRMTransitionGroupPicker debian/topp/usr/bin/RNPxlXICFilter debian/topp/usr/bin/ProteinResolver debian/topp/usr/bin/QualityControl debian/topp/usr/bin/ProteinInference debian/topp/usr/bin/PSMFeatureExtractor debian/topp/usr/bin/INIFileEditor debian/topp/usr/bin/SpectraFilterNLargest debian/topp/usr/bin/IDScoreSwitcher debian/topp/usr/bin/IDPosteriorErrorProbability debian/topp/usr/bin/FeatureFinderIdentification debian/topp/usr/bin/MassTraceExtractor debian/topp/usr/bin/DTAExtractor debian/topp/usr/bin/QCExtractor debian/topp/usr/bin/SpectraFilterBernNorm debian/topp/usr/bin/MultiplexResolver debian/topp/usr/bin/OpenSwathWorkflow debian/topp/usr/bin/Epifany debian/topp/usr/bin/QCMerger debian/topp/usr/bin/FeatureFinderMultiplex debian/topp/usr/bin/CometAdapter debian/topp/usr/bin/FidoAdapter debian/topp/usr/bin/MSSimulator debian/topp/usr/bin/MapRTTransformer debian/topp/usr/bin/NoiseFilterGaussian debian/topp/usr/bin/MyriMatchAdapter debian/topp/usr/bin/IDSplitter debian/topp/usr/bin/ImageCreator debian/topp/usr/bin/InspectAdapter debian/topp/usr/bin/RNPxlSearch debian/topp/usr/bin/MapAlignerIdentification debian/topp/usr/bin/TransformationEvaluation debian/topp/usr/bin/IDExtractor debian/topp/usr/bin/TextExporter debian/topp/usr/bin/PrecursorMassCorrector debian/topp/usr/bin/PeptideIndexer debian/topp/usr/bin/FileInfo debian/topp/usr/bin/FileFilter debian/topp/usr/bin/RNAMassCalculator debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/topp/usr/bin/ExecutePipeline debian/topp/usr/bin/CompNovoCID debian/topp/usr/bin/SpectraMerger debian/topp/usr/bin/PeakPickerIterative debian/topp/usr/bin/DecoyDatabase debian/topp/usr/bin/SeedListGenerator debian/topp/usr/bin/RTEvaluation debian/topp/usr/bin/SemanticValidator debian/topp/usr/bin/AccurateMassSearch debian/topp/usr/bin/NucleicAcidSearchEngine debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/topp/usr/bin/IDConflictResolver debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/topp/usr/bin/CruxAdapter debian/topp/usr/bin/TargetedFileConverter debian/topp/usr/bin/INIUpdater debian/topp/usr/bin/MapStatistics debian/topp/usr/bin/IDRipper debian/topp/usr/bin/ExternalCalibration debian/topp/usr/bin/QCEmbedder debian/topp/usr/bin/QCShrinker debian/topp/usr/bin/MRMPairFinder debian/topp/usr/bin/MRMMapper debian/topp/usr/bin/InclusionExclusionListCreator debian/topp/usr/bin/MSGFPlusAdapter debian/topp/usr/bin/MzMLSplitter debian/topp/usr/bin/OpenSwathDecoyGenerator debian/topp/usr/bin/CompNovo debian/topp/usr/bin/EICExtractor debian/topp/usr/bin/OMSSAAdapter debian/topp/usr/bin/PTPredict debian/topp/usr/bin/OpenSwathDIAPreScoring debian/topp/usr/bin/StaticModification debian/topp/usr/bin/FeatureFinderCentroided debian/topp/usr/bin/MSstatsConverter debian/topp/usr/bin/FeatureLinkerLabeled debian/topp/usr/bin/OpenSwathRTNormalizer debian/topp/usr/bin/PrecursorIonSelector debian/topp/usr/bin/MassCalculator debian/topp/usr/bin/SpectraFilterScaler debian/topp/usr/bin/QCImporter debian/topp/usr/bin/LabeledEval debian/topp/usr/bin/InternalCalibration debian/topp/usr/bin/PTModel debian/topp/usr/bin/TOPPAS debian/topp/usr/bin/MascotAdapter debian/topp/usr/bin/Resampler debian/topp/usr/bin/OpenSwathConfidenceScoring debian/topp/usr/bin/SwathWizard debian/topp/usr/bin/ClusterMassTraces debian/topp/usr/bin/OpenSwathAssayGenerator debian/topp/usr/bin/SiriusAdapter debian/topp/usr/bin/AssayGeneratorMetabo debian/topp/usr/bin/MetaProSIP debian/topp/usr/bin/SpectraFilterNormalizer debian/topp/usr/bin/PepNovoAdapter debian/topp/usr/bin/QCCalculator debian/topp/usr/bin/SpectraFilterMarkerMower debian/topp/usr/bin/MascotAdapterOnline debian/topp/usr/bin/FileMerger debian/topp/usr/bin/FeatureFinderMetaboIdent debian/topp/usr/bin/MapNormalizer debian/topp/usr/bin/FeatureFinderSuperHirn debian/topp/usr/bin/DatabaseSuitability debian/topp/usr/bin/MetaboliteAdductDecharger debian/topp/usr/bin/ConsensusMapNormalizer debian/topp/usr/bin/ConsensusID debian/topp/usr/bin/DeMeanderize debian/topp/usr/bin/QCExporter debian/topp/usr/bin/GNPSExport debian/topp/usr/bin/ProteinQuantifier debian/topp/usr/bin/FeatureLinkerUnlabeled debian/topp/usr/bin/FFEval debian/topp/usr/bin/IDFilter debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/topp/usr/bin/OpenPepXLLF debian/topp/usr/bin/TOFCalibration debian/topp/usr/bin/GenericWrapper debian/topp/usr/bin/IDRTCalibration debian/topp/usr/bin/MzTabExporter debian/topp/usr/bin/Digestor debian/topp/usr/bin/OpenSwathFileSplitter debian/topp/usr/bin/SpectraSTSearchAdapter debian/topp/usr/bin/OpenSwathAnalyzer debian/topp/usr/bin/RNADigestor debian/topp/usr/bin/FuzzyDiff debian/topp/usr/bin/PhosphoScoring debian/topp/usr/bin/TOPPView debian/topp/usr/bin/IDDecoyProbability debian/topp/usr/bin/SpectraFilterThresholdMower debian/topp/usr/bin/OpenMSInfo debian/topp/usr/bin/MSFraggerAdapter debian/topp/usr/bin/NoiseFilterSGolay debian/topp/usr/bin/IDMapper debian/topp/usr/bin/PercolatorAdapter debian/topp/usr/bin/FeatureFinderMRM debian/topp/usr/bin/NovorAdapter debian/topp/usr/bin/OpenPepXL debian/topp/usr/bin/SpectraFilterWindowMower debian/topp/usr/bin/Decharger debian/topp/usr/bin/MapAlignerPoseClustering debian/topp/usr/bin/MapAlignerSpectrum debian/topp/usr/bin/SpecLibCreator debian/topp/usr/bin/ProteomicsLFQ debian/topp/usr/bin/SequenceCoverageCalculator debian/topp/usr/bin/IDMassAccuracy debian/topp/usr/bin/SimpleSearchEngine debian/topp/usr/bin/RTPredict debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/topp/usr/bin/RTModel debian/topp/usr/bin/XMLValidator debian/topp/usr/bin/FeatureFinderMetabo debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/topp/usr/bin/XTandemAdapter debian/topp/usr/bin/TICCalculator debian/topp/usr/bin/IsobaricAnalyzer debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/topp/usr/bin/PeakPickerHiRes debian/topp/usr/bin/DigestorMotif debian/topp/usr/bin/IDFileConverter debian/topp/usr/bin/CVInspector debian/topp/usr/bin/DatabaseFilter debian/topp/usr/bin/MetaboliteSpectralMatcher debian/topp/usr/bin/MaRaClusterAdapter debian/topp/usr/bin/BaselineFilter debian/topp/usr/bin/XFDR debian/topp/usr/bin/ERPairFinder debian/topp/usr/bin/IDMerger debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/topp/usr/bin/PeakPickerWavelet debian/topp/usr/bin/SpectraFilterParentPeakMower debian/topp/usr/bin/SpectraFilterSqrtMower debian/topp/usr/bin/LuciphorAdapter debian/topp/usr/bin/SpecLibSearcher debian/topp/usr/bin/MapAlignerTreeGuided debian/topp/usr/bin/FalseDiscoveryRate dh_installdeb -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -p -m0644 debian/.debhelper/generated/libopenms2.6.0/triggers debian/libopenms2.6.0/DEBIAN/triggers install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN dh_gencontrol -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN echo misc:Depends= >> debian/libopenms2.6.0.substvars echo misc:Pre-Depends= >> debian/libopenms2.6.0.substvars install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN dpkg-gencontrol -plibopenms2.6.0 -ldebian/changelog -Tdebian/libopenms2.6.0.substvars -cdebian/control -Pdebian/.debhelper/libopenms2.6.0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libopenms2.6.0-dbgsym "-DDepends=libopenms2.6.0 (= \${binary:Version})" "-DDescription=debug symbols for libopenms2.6.0" "-DBuild-Ids=04da00ce5ee498b5513bec28e8300728490afcc7 58cb0c157120e98a786fd62e9b57aa03bde523d8 a3b9a9ba1c2c990a507be4841078eb95791b84ac ce1b20f4f547d04228a6771c4668729d59760e93" -DSection=debug -UReplaces -UBreaks install -m0755 -d debian/libopenms-dev/DEBIAN echo misc:Depends= >> debian/libopenms-dev.substvars echo misc:Pre-Depends= >> debian/libopenms-dev.substvars dpkg-gencontrol -plibopenms-dev -ldebian/changelog -Tdebian/libopenms-dev.substvars -cdebian/control -Pdebian/libopenms-dev install -m0755 -d debian/openms-common/DEBIAN echo misc:Depends= >> debian/openms-common.substvars echo misc:Pre-Depends= >> debian/openms-common.substvars dpkg-gencontrol -popenms-common -ldebian/changelog -Tdebian/openms-common.substvars -cdebian/control -Pdebian/openms-common install -m0755 -d debian/topp/DEBIAN echo misc:Depends= >> debian/topp.substvars echo misc:Pre-Depends= >> debian/topp.substvars install -m0755 -d debian/.debhelper/topp/dbgsym-root/DEBIAN dpkg-gencontrol -ptopp -ldebian/changelog -Tdebian/topp.substvars -cdebian/control -Pdebian/.debhelper/topp/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=topp-dbgsym "-DDepends=topp (= \${binary:Version})" "-DDescription=debug symbols for topp" "-DBuild-Ids=01d0f74f92299e6dd1846fec948f2f64cf35435c 0279a817336ab17ca069b375b2f9a7c9afc0509c 05d054470384641315d8d18877a71b446045a1ed 05d2219c271bd5f61e6f74bc02816a2d35775c4b 0993839da390e3a88628253a4bb74f42211e5fc8 0a049c021315b2e5ab9580bc47549266765c473c 0b4d4499b2f78d7406e8dc15e887d42bece2ba2e 0ed3b1c20f702fd61561d931a2c4a0797d4699a5 11a2296b1c26ca41d012c8a3d1670bfea881dca4 1446fd1ee9682151677285c3681c80fd74440a3c 14c65b10b4e29f1cca6db39a9e8291f9e2a2a87d 14e9be788757e1215f5a19cee0a21239927c1a7d 19444485f02b7d6c9f47b374f3a32c146d940f48 1b521f469ad82932422fb00e86799a579b265626 1e35bca6257dea1e2c0b9442e8bb01912aa69315 1e62887efec6dbe891dbb5a34775183588a5e303 1f7b123939c6e86b7bd51c9fe827ea1f7c5d575e 1f8de17d3bc3eaf941872c000912a1ffee68a5e8 219c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a 2261b29dc25dbd4bdb7791dc7026a56013c83e1b 23d3f0ef9ed280c1cd8f59340bb11626f8577118 2589494d2147471bf7c6fa45a9c879c790480ac2 25aab4a5c0e03e686dfe5880b422ac369aa73009 282b97ed63ae5e7915e9ae03d49f82c7147b03e6 2c22a9717de2a247f7be808c5656b7159a9f5e19 2cec8c0ad34e3bb06c0fde991b013399362f5bb7 30c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b 33cead0e486e4a1ffc3eb7f608791b77d774137f 343c6b1982a4692cf4838686394a72942c8a1084 3609c33e761c669ed4af1b136a93feae11810237 36804dd7e11d9ad03d3465c648410c0f642e1fe6 3841dd16e2eb81dcbacf8df22445f3302f2126df 389dcdec63f4cb9b61f9d126ae8b6edad10c117e 394ffc163e55a2f3821087b4c32620e005b05f1d 3af505e71921cca9342c53598bb33e042cf8e655 3b8fd464459d8016b39677dce49b8bfa063d7589 3cd95ac9c537203f3f38fb8f986247b2d105e4e3 3d7566a19a308220be0d36e702f77425b8a9f45e 3e04dd6ee01e3ff8f932c56c8df56addcb18b8e2 3f564a5ebace1c97d88a55d47479c18c80520099 3f5d302ed4b98dc1c4941de2b9e713f1b2f3c16c 4001c59aa31c3b493d84babdece8f404c29f2664 40b7cd729827705ddd202bcce9fb313082f1b4f4 41896c365e13294e1d3dffc7c9a94416081f8f55 42eb37347311175415c2d307e5d129b223b81458 45486900a280499e9ce0bd35d3b4ec1f83969857 46b82db7ee26bef656042a1823a0285bfb777688 4813ce6e5f8ad88a63c94c64bd45fedf3c06af78 49114bd9d4af8aa300b494be548f605a2d409df5 4a29df229dddfacc1d8d215bce54b71ef0362834 4b1c006fb053a7b90f7c7e40476cfe06d7b1fda9 4c2cdf3a0a5d498a980a16e31aa74ae389655849 4c39196461ced455575400293a155279143ddc33 4fc43367bbdcfc13a4c8f6f732e3cb233eff7ae0 4fdbc13277df22a53def46b7b6b9ecbe38eb57c4 510d48c8a7ac74848cddde14db0c1aa75f07034a 52898aa2af285158568a3e58b17471f723f92d2e 539f857213e1830f935e142fe2b6175351b7f97b 53dc6dafb83b70ddd76dcf3d4180e28fca4390ba 558c4726e0ae4d0d78265879405b410db28e290f 5616b7348ea87379abb164c5a1ee39d174c664a6 563303441586040ff6b9e172c2d78145f9bebcfb 5bb1268141e0c1af094552e27d280bf0627f92c5 5c425185552253e69c7f02a49b55380b5b0c481a 5ccd4cbfdc4a5a5575fdfee7c984c77dd114fda5 624e07c2c03765d5d780093c7e58b51ca185cb1b 6298e7648c504a0152bdccd71a6df4c361086e0f 65cf6aaa34f3af57879159dffc030b8a3d86e507 6634d615a8e16a3c9c784a8230739cab16b1f1f2 66c74f9ee348576a633bf299b76b2536a40ce89b 68c9abae4c9a6464b64cb46e16aaf5e795ab72fd 6d1420ecfddeed1dd7cdd41314dd4c89ae42a195 72f48c3865d637a929a8a0b16dc2c412fb37205a 731e01dbe169d41a1df08f14ec8edaa8a1223107 758e7cb0b7dccecbb084b8b6babfa5dc8a6036d9 761a2683716458d2b1bdd11d68936debb4b4d80b 7744484d137f24d01b6c892c008adb1330f9c261 77877fef4a4489f33d871ed540eb7f40f2db4bf3 77951e9760dd31e5ffcb01da7044a2b480325133 782d866ac69a0513d05660cd55e155271bbd1d0a 7abecb2926547db2a3033cda02f09693f55b6aac 7d670cb60d952abfa5584286b06489f5b32944fe 7d6f236f7f43dce12d6bcc0d4aca5a34d0b61119 7e62129225acef9aa5549420a950c153ba6642d0 7e65b46c8713774d8a8a559b5f1254611c1f1847 7e75f05605f142c18b8f465db3c6285122090618 80302608c6a2d3ce2915fa2a9f4f0bdb101b8d45 8217ef85a26fc345398ff79aeb65f64b2b7ad690 844e32774a3da528efe66114914b36aa057c3eb4 875f5e2deeb94f5ce92c5ccf9db7a9494571e154 877bf617bf29ecd5479c04b494fea8b14c04dc7f 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a941c014e30dd53c9fd36cfacf4f9619f1ac3a56 abb69152641a7334af86b28956c1f0cf6e2a4407 ac8f7fba23330b30e5e0a97bcaec6e7261a2d992 acc7cd6105d09b07d484bb49f8de861918b7e4cc ade13d5a461884801175b08925d2b89a69442df2 af0004306f2cfd621f1dc80aa6e081c29effec2c b008aa26f3024dc8707250727f82e141c39b0fce b0f2974c5ae9bfc6e1f82d1e16e766217b8df1d4 b15167f6300746798f9250d5688d9bfde9b9dc25 b19481b60d4c2470ffba1a57a9f6661f070b6907 b2277f8e473c13094a18a3ced688d92fbcd0e1da b25e44e3dd462f4b630a5888476802dac6f6a7fe b3bc5bf6df2309ccf9d757eab5907add280500be b478b2a22cbe5aeadf060393bcaa770530cd5bc8 b6193d999b1c8a8cc1ff0099e3674acae6888494 b620f1e9284fb396fba0f826134d128a3619f414 ba2384b0b76bea5695bf64a26cbbe5238041080f bc000c3e463184b6a3e21b4df3621adda4feaa58 bc4aaf1ed1fd10aaab01acae3a77748cbb051108 c02236f96b801d785af5f638e8ab060fa770c71b c06f7e28bfd7f8700f318241744fe98581f54ffe c2c3d957c57258ef0bc0c5505bca0bb5ab9571c3 c394b515c5787e32a936d70c3710eb954583e926 c4d83959fc7f1b0e5d56c3fb442f781c55b4d666 c5e903437a34d67a7d796b85783b8b1c4ace5045 c75a1fdc32798da05ab617ff721723d9284ae1da c7aa0693d467e2d3ea2b27323225fe1c85405766 c88379d94f236f2782ae647230e80880ad47c38a cb0b604229b26102c320e3d454935f0cadd07170 ccbf94d441c753c03c5c99fa289705e910faf1a6 cd02f55436aa8497563ac281cd9f2a91d7701976 ce2995630cbba6a2e11c5ac6d5e4b6f709387d32 ce640c3c240db2f07c3e377ecfaf4b52b60cd818 cfd987e2486fca6ae627e84ea20cc73729701ce2 d038fa0304b9c7df243c20a74d8ab9990e1a9480 d086b5454cec8aac3f62a4c6af2315e2e45499e4 d19b0dd7e44113cad345db4cd805d4a51904df8e d1ea6196d92311f49667047732a792c1808840db d41ad1bed622a1b67b4f62ced97f2c853b84e28e d593bbc7c82c971851cf99b3d334c1a6789b61d3 d67b30b98cedc0a0fd13fbd5e44f49e40988029b d723bbfa03f78b5018d90aeab64a13673dfbfa2f d7e253458326935720691b151c127e7646eeaa43 d938e4d2f809f92bb9f3c68095830addf087b749 da8d91f27a049867a333d42e245bda06373447c2 dd692aadf710f6af2d3bbdabbdf72a90507253d5 dd9af9af24b1c8ed83f0ab188ba66a3f330e8cc2 e1b93faacfd5ac2c6800036df98a5f2ff11d9d0f e248bf707e6083db29f6fb38f1b6ffc823ba5070 e2756e9e6e849707e5be9b9a6452475638a2988c e5298575f3f3d5d098a2e6982bd59f2c21058666 e71380f25b2976c959ff1603d06e5c87507eb799 e7169bc2c973ce478507700762f42f0c51ec4e66 ed2c5e899679a70db739c5aabfff4762dd036c43 eda34de88c0fde88536ed56e5be9f5603f7363bd ede9de160d3dc26531dac0f0bd8701f5fc723e68 f7fd0d56f7dd71f460c2af31a6d7388157d9c20a f91272b72b15cac44a1289e3c3410057a101fd11 fa4215955e9239a29b536eccfc237ed30be3ceac fa45a9ebcf1035353a5754f68cc95a237b5558af fe1ea4e3a793339a8730f629fa28ef9738f25c5d ff5c81d99596a17cedf20375b8e3fea964b3fae4 ff5ead2d952b4b0aeda421b0daf3146dba0db017 fff8c0abe7b358129ddf14f7f92be41952c047ee" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/openms/DEBIAN echo misc:Depends= >> debian/openms.substvars echo misc:Pre-Depends= >> debian/openms.substvars dpkg-gencontrol -popenms -ldebian/changelog -Tdebian/openms.substvars -cdebian/control -Pdebian/openms install -m0755 -d debian/openms-doc/DEBIAN echo misc:Depends= >> debian/openms-doc.substvars echo misc:Pre-Depends= >> debian/openms-doc.substvars dpkg-gencontrol -popenms-doc -ldebian/changelog -Tdebian/openms-doc.substvars -cdebian/control -Pdebian/openms-doc chmod 0644 -- debian/openms/DEBIAN/control chown 0:0 -- debian/openms/DEBIAN/control chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibopenms2.6.0 -ldebian/changelog -Tdebian/libopenms2.6.0.substvars -cdebian/control -Pdebian/libopenms2.6.0 chmod 0644 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptopp -ldebian/changelog -Tdebian/topp.substvars -cdebian/control -Pdebian/topp chmod 0644 -- debian/openms-common/DEBIAN/control chown 0:0 -- debian/openms-common/DEBIAN/control chmod 0644 -- debian/libopenms-dev/DEBIAN/control chown 0:0 -- debian/libopenms-dev/DEBIAN/control chmod 0644 -- debian/libopenms2.6.0/DEBIAN/control chown 0:0 -- debian/libopenms2.6.0/DEBIAN/control chmod 0644 -- debian/topp/DEBIAN/control chown 0:0 -- debian/topp/DEBIAN/control chmod 0644 -- debian/openms-doc/DEBIAN/control chown 0:0 -- debian/openms-doc/DEBIAN/control dh_md5sums -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN install -m0755 -d debian/libopenms-dev/DEBIAN cd debian/openms >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libopenms2.6.0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/topp >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/openms-common >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/openms-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libopenms-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/openms/DEBIAN/md5sums chown 0:0 -- debian/openms/DEBIAN/md5sums chmod 0644 -- debian/libopenms-dev/DEBIAN/md5sums chown 0:0 -- debian/libopenms-dev/DEBIAN/md5sums chmod 0644 -- debian/topp/DEBIAN/md5sums chown 0:0 -- debian/topp/DEBIAN/md5sums install -m0755 -d debian/.debhelper/topp/dbgsym-root/DEBIAN cd debian/.debhelper/topp/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libopenms2.6.0/DEBIAN/md5sums chown 0:0 -- debian/libopenms2.6.0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN cd debian/.debhelper/libopenms2.6.0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/openms-common/DEBIAN/md5sums chown 0:0 -- debian/openms-common/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/openms-doc/DEBIAN/md5sums chown 0:0 -- debian/openms-doc/DEBIAN/md5sums dh_builddeb -O--buildsystem=cmake -O--no-parallel dpkg-deb --build debian/libopenms2.6.0 .. dpkg-deb --root-owner-group --build debian/.debhelper/libopenms2.6.0/dbgsym-root .. dpkg-deb --build debian/libopenms-dev .. dpkg-deb --build debian/topp .. dpkg-deb --root-owner-group --build debian/.debhelper/topp/dbgsym-root .. dpkg-deb --build debian/openms-common .. dpkg-deb --build debian/openms-doc .. dpkg-deb --build debian/openms .. dpkg-deb: building package 'topp' in '../topp_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms-common' in '../openms-common_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'libopenms-dev' in '../libopenms-dev_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'libopenms2.6.0-dbgsym' in '../libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'topp-dbgsym' in '../topp-dbgsym_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms-doc' in '../openms-doc_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'openms' in '../openms_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'libopenms2.6.0' in '../libopenms2.6.0_2.6.0+cleaned1-4_i386.deb'. dpkg-genbuildinfo --build=binary -O../openms_2.6.0+cleaned1-4_i386.buildinfo dpkg-genchanges --build=binary -O../openms_2.6.0+cleaned1-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/34409 and its subdirectories I: Current time: Fri May 3 13:39:05 -12 2024 I: pbuilder-time-stamp: 1714786745 Sat May 4 01:39:10 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Sat May 4 01:39:10 UTC 2024 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Sat May 4 04:00:24 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. Sat May 4 04:00:25 UTC 2024 I: openms_2.6.0+cleaned1-4_i386.changes: Format: 1.8 Date: Sat, 23 Dec 2023 15:20:41 +0100 Source: openms Binary: libopenms-dev libopenms2.6.0 libopenms2.6.0-dbgsym openms openms-common openms-doc topp topp-dbgsym Architecture: i386 all Version: 2.6.0+cleaned1-4 Distribution: unstable Urgency: medium Maintainer: The Debichem Group Changed-By: Anton Gladky Description: libopenms-dev - library for LC/MS data management and analysis - dev files libopenms2.6.0 - library for LC/MS data management and analysis - runtime openms - package for LC/MS data management and analysis openms-common - package for LC/MS data management and analysis - shared data openms-doc - package for LC/MS data management and analysis - documentation topp - set of programs implementing The OpenMS Proteomic Pipeline Changes: openms (2.6.0+cleaned1-4) unstable; urgency=medium . * Team upload. * Add missing include of Boost-headers. * Do not use versioned boost dev dependencies. Checksums-Sha1: d20c3ac7a131346de6fe3769bf76cca5e221d586 880176 libopenms-dev_2.6.0+cleaned1-4_i386.deb 9b8fe3d1da7c79284ad3a457658b0bd5b5323028 215889632 libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb fff711cef8c5856294c2bd226064d67c8817d090 8655580 libopenms2.6.0_2.6.0+cleaned1-4_i386.deb 7054c495df2e336675bbc497a778c4b49c61314d 4291064 openms-common_2.6.0+cleaned1-4_all.deb fedb43c8aaf14a61c212c3601b085d1281f30543 43028580 openms-doc_2.6.0+cleaned1-4_all.deb 647dd737498c33736b31eecad72f9ece82221ed7 53584 openms_2.6.0+cleaned1-4_all.deb 30aa3bc89e01e6643427f0ce26128a93d3e10276 18930 openms_2.6.0+cleaned1-4_i386.buildinfo f63141a2bfed55423dfd0179e2b182db8b258dcf 82062588 topp-dbgsym_2.6.0+cleaned1-4_i386.deb 966f250fcd8b9054b63cf78d0e4cfbdf1aae8a97 3365400 topp_2.6.0+cleaned1-4_i386.deb Checksums-Sha256: 86c94dbf9436c3fddd1346a834df6f70dd412dbf7abe3c71970fce75fdc03c2e 880176 libopenms-dev_2.6.0+cleaned1-4_i386.deb 0b2a03f9dffbd0f5b22e482d8b9c242d90361d1c421daa8a37f15a9aa6bc071e 215889632 libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb 73c96eea47c13bc5dca14a08b99b52785cade7ef284021916170fa7053f50878 8655580 libopenms2.6.0_2.6.0+cleaned1-4_i386.deb a8748327a0062b297dbecd5cd578b72bd2bccf97e72536a2bd403090abf3b72f 4291064 openms-common_2.6.0+cleaned1-4_all.deb 7f76be3b8e539387377ff48432650d575c2f88e9a01256d7607cc1d7d1a83b90 43028580 openms-doc_2.6.0+cleaned1-4_all.deb bdb178d9722cc54222301a483afb5e3e37a74191e6f3d61b84e0c97ed6c318c1 53584 openms_2.6.0+cleaned1-4_all.deb 657d170adaa0e64c0e6a5496bf88a61bdf50ff60e01701f7334ed27797c661fe 18930 openms_2.6.0+cleaned1-4_i386.buildinfo 7691fb91aacbf13b076b24d011f8e33813badb95054169f5d9bcef4a404a4054 82062588 topp-dbgsym_2.6.0+cleaned1-4_i386.deb a15d914f8df46b20a6f6b4b7736b2748e8620620351fc0e5018aff4d43715fcc 3365400 topp_2.6.0+cleaned1-4_i386.deb Files: 53cc20628e5bc6804db4e4d287cc18fd 880176 libdevel optional libopenms-dev_2.6.0+cleaned1-4_i386.deb 793246e417df6155521864346c8280ac 215889632 debug optional libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb f27fe9d3a8e267d60b235540eeb91177 8655580 libs optional libopenms2.6.0_2.6.0+cleaned1-4_i386.deb 7c8a3ea518c636cb086c11e6f4ad1033 4291064 science optional openms-common_2.6.0+cleaned1-4_all.deb f1778025a93c262b62e834fee3350d9d 43028580 doc optional openms-doc_2.6.0+cleaned1-4_all.deb daf16ac3814bc02de25abd7824aef9a6 53584 science optional openms_2.6.0+cleaned1-4_all.deb 5126de36b94ae770c81bfd8d301efc43 18930 science optional openms_2.6.0+cleaned1-4_i386.buildinfo 23648cdc4ad7dc970d804558be179d8a 82062588 debug optional topp-dbgsym_2.6.0+cleaned1-4_i386.deb 4062af5d70940fb8625b243208a4e551 3365400 science optional topp_2.6.0+cleaned1-4_i386.deb Sat May 4 04:00:25 UTC 2024 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Sat May 4 07:13:40 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 3 16:00:30 -12 2024 I: pbuilder-time-stamp: 1714795230 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [openms_2.6.0+cleaned1-4.dsc] I: copying [./openms_2.6.0+cleaned1.orig.tar.gz] I: copying [./openms_2.6.0+cleaned1-4.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Dec 23 14:24:11 2023 gpgv: using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./openms_2.6.0+cleaned1-4.dsc: no acceptable signature found dpkg-source: info: extracting openms in openms-2.6.0+cleaned1 dpkg-source: info: unpacking openms_2.6.0+cleaned1.orig.tar.gz dpkg-source: info: unpacking openms_2.6.0+cleaned1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying sonameAndNameLinkSkipCmakeBuildSystem.patch dpkg-source: info: applying installDirsSettingsCmakeBuildSystem.patch dpkg-source: info: applying fix-glpk-version-check.patch dpkg-source: info: applying add_missing_boost_header.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21273/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='bb7622336a9040bda7821edaf369e909' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21273' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/pbuilderrc_cnp0 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/b1 --logfile b1/build.log openms_2.6.0+cleaned1-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 2 07:42 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21273/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-exec (>= 0.3), dpkg-dev (>= 1.19.7), cmake (>= 3.1.2), libxerces-c-dev (>= 3.2.2), libeigen3-dev, libwildmagic-dev (>= 5.17), libboost-dev, libboost-iostreams-dev, libboost-date-time-dev, libboost-math-dev, libsqlite3-dev, libsvm-dev (>= 3.21), libglpk-dev (>= 4.65), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), qtbase5-dev (>= 5.11.3), libqt5opengl5-dev (>= 5.11.3), libqt5svg5-dev (>= 5.11.3), coinor-libcbc-dev (>= 2.9.9), coinor-libcgl-dev (>= 0.59.10), libhdf5-dev, imagemagick, doxygen (>= 1.8.13), graphviz, texlive-extra-utils, texlive-latex-extra, texlive-latex-recommended, texlive-fonts-extra, texlive-font-utils, texlive-plain-generic, tex-gyre, ghostscript, texlive-fonts-recommended dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19680 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec (>= 0.3); however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.1.2); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libxerces-c-dev (>= 3.2.2); however: Package libxerces-c-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libwildmagic-dev (>= 5.17); however: Package libwildmagic-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libsvm-dev (>= 3.21); however: Package libsvm-dev is not installed. pbuilder-satisfydepends-dummy depends on libglpk-dev (>= 4.65); however: Package libglpk-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev (>= 1.2.7); however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev (>= 1.0.6); however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on cppcheck (>= 1.54); however: Package cppcheck is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev (>= 5.11.3); however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev (>= 5.11.3); however: Package libqt5opengl5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5svg5-dev (>= 5.11.3); however: Package libqt5svg5-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcbc-dev (>= 2.9.9); however: Package coinor-libcbc-dev is not installed. pbuilder-satisfydepends-dummy depends on coinor-libcgl-dev (>= 0.59.10); however: Package coinor-libcgl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on imagemagick; however: Package imagemagick is not installed. pbuilder-satisfydepends-dummy depends on doxygen (>= 1.8.13); however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-extra-utils; however: Package texlive-extra-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-extra; however: Package texlive-fonts-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-font-utils; however: Package texlive-font-utils is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on tex-gyre; however: Package tex-gyre is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} coinor-libcbc-dev{a} coinor-libcbc3.1{a} coinor-libcgl-dev{a} coinor-libcgl1{a} coinor-libclp-dev{a} coinor-libclp1{a} coinor-libcoinutils-dev{a} coinor-libcoinutils3v5{a} coinor-libosi-dev{a} coinor-libosi1v5{a} cppcheck{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} graphviz{a} groff-base{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} imagemagick{a} imagemagick-6-common{a} imagemagick-6.q16{a} intltool-debian{a} libabsl20230802{a} libaec-dev{a} libaec0{a} libamd3{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libarchive13t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libblas-dev{a} libblas3{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbsd0{a} libbtf2{a} libbz2-dev{a} libcairo2{a} libcamd3{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp16t64{a} libclang1-16t64{a} libcolamd3{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libexpat1{a} libfftw3-double3{a} libfile-homedir-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfmt9{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglpk-dev{a} libglpk40{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu-dev{a} libicu72{a} libidn12{a} libijs-0.35{a} libinput-bin{a} libinput10{a} libjbig0{a} libjbig2dec0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libklu2{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.5-0{a} libldl3{a} liblerc4{a} libllvm16t64{a} libllvm17t64{a} liblqr-1-0{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmagickcore-6.q16-7t64{a} libmagickwand-6.q16-7t64{a} libmd4c0{a} libmime-charset-perl{a} libmtdev1t64{a} libnghttp2-14{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparu0{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl5t64{a} libptexenc1{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5gui5t64{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5svg5{a} libqt5svg5-dev{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} librav1e0{a} libraw23t64{a} librbio4{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsombok3{a} libspex3{a} libspqr4{a} libsqlite3-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsvm-dev{a} libsvm3{a} libsynctex2{a} libsz2{a} libteckit0{a} libtexlua53-5{a} libthai-data{a} libthai0{a} libtiff6{a} libtinyxml2-10{a} libtool{a} libuchardet0{a} libumfpack6{a} libunicode-linebreak-perl{a} libuv1t64{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libwildmagic-common{a} libwildmagic-dev{a} libwildmagic5{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxerces-c-dev{a} libxerces-c3.2t64{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxt6t64{a} libxxf86vm1{a} libyaml-tiny-perl{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} lmodern{a} m4{a} man-db{a} media-types{a} netbase{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3-pkg-resources{a} python3-pygments{a} python3.11{a} python3.11-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} shared-mime-info{a} t1utils{a} tex-common{a} tex-gyre{a} texlive-base{a} texlive-binaries{a} texlive-extra-utils{a} texlive-font-utils{a} texlive-fonts-extra{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-luatex{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} x11proto-dev{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates cm-super curl dbus default-jre dvisvgm fonts-adf-accanthis fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin fonts-cantarell fonts-clear-sans fonts-comfortaa fonts-comic-neue fonts-croscore fonts-crosextra-caladea fonts-crosextra-carlito fonts-dejavu-extra fonts-droid-fallback fonts-ebgaramond-extra fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-go fonts-inter fonts-lato fonts-liberation2 fonts-linuxlibertine fonts-lobstertwo fonts-noto-color-emoji fonts-noto-core fonts-noto-mono fonts-oflb-asana-math fonts-open-sans fonts-paratype fonts-roboto-slab fonts-roboto-unhinted fonts-sil-andika fonts-sil-charis fonts-sil-gentium fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact fonts-stix fonts-texgyre fonts-texgyre-math javascript-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libldap-common liblog-log4perl-perl libltdl-dev libmagickcore-6.q16-7-extra libmail-sendmail-perl libnet-dbus-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules libspreadsheet-parseexcel-perl libx11-protocol-perl lynx mesa-vulkan-drivers netpbm ps2eps psmisc publicsuffix qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 ruby texlive-fonts-extra-links tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 389 newly installed, 0 to remove and 0 not upgraded. Need to get 1143 MB of archives. After unpacking 3684 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libfftw3-double3 i386 3.3.10-1+b2 [624 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.43-5 [286 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.2+dfsg-1+b4 [449 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1 [23.1 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+23 [252 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+6 [95.2 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 13 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.3.2-0.4+b1 [107 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.4.1-1 [330 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.17.6-1+b2 [10.2 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b1 [195 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.17.6-1+b2 [13.7 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.17.6-1+b2 [299 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.14-2+b1 [165 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.78.4-7 [1522 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 liblqr-1-0 i386 0.4.2-2.1+b1 [31.8 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-7+b1 [395 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.0-2+b3 [197 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libraw23t64 i386 0.21.2-2.1 [407 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.3.2-0.4+b1 [314 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.3.2-0.4+b1 [108 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.3.2-0.4+b1 [122 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-1 [148 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 imagemagick-6-common all 8:6.9.12.98+dfsg1-5.2 [67.1 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libmagickcore-6.q16-7t64 i386 8:6.9.12.98+dfsg1-5.2 [1758 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libmagickwand-6.q16-7t64 i386 8:6.9.12.98+dfsg1-5.2 [298 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libpython3.11-minimal i386 3.11.9-1 [817 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 python3.11-minimal i386 3.11.9-1 [1918 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.11.8-1 [26.3 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 tzdata all 2024a-4 [255 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-4 [69.3 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libpython3.11-stdlib i386 3.11.9-1 [1795 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 python3.11 i386 3.11.9-1 [602 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.11.8-1 [9336 B] Get: 59 http://deb.debian.org/debian unstable/main i386 python3 i386 3.11.8-1 [27.4 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-4 [1194 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40-8 [97.2 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 autoconf all 2.71-3 [332 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 autopoint all 0.21-14 [496 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libarchive13t64 i386 3.7.2-2 [387 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1~rc2-1 [22.8 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 83 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-6 [20.5 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-6 [60.6 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.17+dfsg-1 [198 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.61.0-1+b1 [84.0 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.0-4.1+b2 [225 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.7.1-5 [478 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libjsoncpp25 i386 1.9.5-6+b2 [89.2 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 librhash0 i386 1.4.3-3+b1 [143 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.48.0-1.1 [156 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 cmake-data all 3.29.2-2 [2167 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 cmake i386 3.29.2-2 [11.9 MB] Get: 98 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14-20240429-1 [733 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 coinor-libcoinutils3v5 i386 2.11.4+repack1-4 [473 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 coinor-libosi1v5 i386 0.108.10+ds-1 [282 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 coinor-libclp1 i386 1.17.9+ds-1 [867 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 coinor-libcgl1 i386 0.60.8+ds-1 [421 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 coinor-libcbc3.1 i386 2.10.11+ds1-2 [737 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libblas-dev i386 3.12.0-3 [152 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 liblapack-dev i386 3.12.0-3 [4400 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 coinor-libcoinutils-dev i386 2.11.4+repack1-4 [815 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 coinor-libosi-dev i386 0.108.10+ds-1 [352 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 coinor-libclp-dev i386 1.17.9+ds-1 [1062 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 coinor-libcgl-dev i386 0.60.8+ds-1 [535 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 coinor-libcbc-dev i386 2.10.11+ds1-2 [898 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libtinyxml2-10 i386 10.0.0+dfsg-2+b1 [33.3 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 cppcheck i386 2.14.0-1 [2352 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 125 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 debhelper all 13.15.3 [901 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 dh-exec i386 0.29 [25.9 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20230828-1+b1 [97.8 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libllvm16t64 i386 1:16.0.6-26 [26.9 MB] Get: 135 http://deb.debian.org/debian unstable/main i386 libclang-cpp16t64 i386 1:16.0.6-26 [13.6 MB] Get: 136 http://deb.debian.org/debian unstable/main i386 libclang1-16t64 i386 1:16.0.6-26 [7731 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libfmt9 i386 9.1.0+ds1-2 [119 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2+b1 [5106 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libgs-common all 10.03.0~dfsg-1 [148 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libgs10-common all 10.03.0~dfsg-1 [474 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libavahi-common-data i386 0.8-13+b2 [112 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libavahi-common3 i386 0.8-13+b2 [45.3 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libdbus-1-3 i386 1.14.10-4+b1 [217 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libavahi-client3 i386 0.8-13+b2 [49.3 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libcups2t64 i386 2.4.7-1.2+b1 [264 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libidn12 i386 1.42-2 [81.3 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libijs-0.35 i386 0.35-15.1+b1 [15.7 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libjbig2dec0 i386 0.20-1+b2 [66.5 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libpaper1 i386 1.1.29+b1 [13.0 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libgs10 i386 10.03.0~dfsg-1 [2649 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 ghostscript i386 10.03.0~dfsg-1 [50.2 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.2-9+b1 [40.3 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.2-9+b1 [67.5 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.8.2-2 [1910 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libabsl20230802 i386 20230802.1-4 [521 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-2+b1 [325 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 librav1e0 i386 0.7.1-2 [650 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0~git202401110.af6ac82-1 [108 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.0.4-2 [113 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b1 [57.8 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-9+b3 [129 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2 [158 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-1 [115 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-1 [105 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.0-3+b1 [588 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 8.3.0-2+b1 [2234 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.52.2+ds-1 [226 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.52.2+ds-1 [51.2 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.52.2+ds-1 [35.9 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.2-9+b1 [42.4 kB] Get: 183 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.2-9+b1 [712 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.2-9+b1 [198 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.2-9+b1 [198 kB] Get: 186 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b2 [60.5 kB] Get: 187 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.14-1+b2 [208 kB] Get: 188 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.2-9+b1 [576 kB] Get: 189 http://deb.debian.org/debian unstable/main i386 hdf5-helpers i386 1.10.10+repack-3.3 [23.4 kB] Get: 190 http://deb.debian.org/debian unstable/main i386 hicolor-icon-theme all 0.17-2 [11.4 kB] Get: 191 http://deb.debian.org/debian unstable/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 192 http://deb.debian.org/debian unstable/main i386 imagemagick-6.q16 i386 8:6.9.12.98+dfsg1-5.2 [290 kB] Get: 193 http://deb.debian.org/debian unstable/main i386 imagemagick i386 8:6.9.12.98+dfsg1-5.2 [19.4 kB] Get: 194 http://deb.debian.org/debian unstable/main i386 libaec0 i386 1.1.3-1 [24.5 kB] Get: 195 http://deb.debian.org/debian unstable/main i386 libsz2 i386 1.1.3-1 [7824 B] Get: 196 http://deb.debian.org/debian unstable/main i386 libaec-dev i386 1.1.3-1 [22.4 kB] Get: 197 http://deb.debian.org/debian unstable/main i386 libsuitesparseconfig7 i386 1:7.7.0+dfsg-2 [22.7 kB] Get: 198 http://deb.debian.org/debian unstable/main i386 libamd3 i386 1:7.7.0+dfsg-2 [41.6 kB] Get: 199 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 29-2 [5276 B] Get: 200 http://deb.debian.org/debian unstable/main i386 libboost1.83-dev i386 1.83.0-2.1+b1 [10.6 MB] Get: 201 http://deb.debian.org/debian unstable/main i386 libboost-date-time1.83.0 i386 1.83.0-2.1+b1 [230 kB] Get: 202 http://deb.debian.org/debian unstable/main i386 libboost-serialization1.83.0 i386 1.83.0-2.1+b1 [341 kB] Get: 203 http://deb.debian.org/debian unstable/main i386 libboost-serialization1.83-dev i386 1.83.0-2.1+b1 [384 kB] Get: 204 http://deb.debian.org/debian unstable/main i386 libboost-date-time1.83-dev i386 1.83.0-2.1+b1 [239 kB] Get: 205 http://deb.debian.org/debian unstable/main i386 libboost-date-time-dev i386 1.83.0.2+b2 [3596 B] Get: 206 http://deb.debian.org/debian unstable/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 207 http://deb.debian.org/debian unstable/main i386 libboost-regex1.83.0 i386 1.83.0-2.1+b1 [328 kB] Get: 208 http://deb.debian.org/debian unstable/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 209 http://deb.debian.org/debian unstable/main i386 libboost-regex1.83-dev i386 1.83.0-2.1+b1 [347 kB] Get: 210 http://deb.debian.org/debian unstable/main i386 libboost-iostreams1.83-dev i386 1.83.0-2.1+b1 [264 kB] Get: 211 http://deb.debian.org/debian unstable/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 212 http://deb.debian.org/debian unstable/main i386 libboost-math1.83.0 i386 1.83.0-2.1+b1 [440 kB] Get: 213 http://deb.debian.org/debian unstable/main i386 libboost-math1.83-dev i386 1.83.0-2.1+b1 [523 kB] Get: 214 http://deb.debian.org/debian unstable/main i386 libboost-math-dev i386 1.83.0.2+b2 [3800 B] Get: 215 http://deb.debian.org/debian unstable/main i386 libbtf2 i386 1:7.7.0+dfsg-2 [24.4 kB] Get: 216 http://deb.debian.org/debian unstable/main i386 libcamd3 i386 1:7.7.0+dfsg-2 [39.5 kB] Get: 217 http://deb.debian.org/debian unstable/main i386 libccolamd3 i386 1:7.7.0+dfsg-2 [42.1 kB] Get: 218 http://deb.debian.org/debian unstable/main i386 libcolamd3 i386 1:7.7.0+dfsg-2 [34.1 kB] Get: 219 http://deb.debian.org/debian unstable/main i386 libcholmod5 i386 1:7.7.0+dfsg-2 [714 kB] Get: 220 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 221 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 222 http://deb.debian.org/debian unstable/main i386 libcurl3t64-gnutls i386 8.7.1-5 [468 kB] Get: 223 http://deb.debian.org/debian unstable/main i386 libcurl4-openssl-dev i386 8.7.1-5 [600 kB] Get: 224 http://deb.debian.org/debian unstable/main i386 libcxsparse4 i386 1:7.7.0+dfsg-2 [99.3 kB] Get: 225 http://deb.debian.org/debian unstable/main i386 libdouble-conversion3 i386 3.3.0-1+b1 [44.9 kB] Get: 226 http://deb.debian.org/debian unstable/main i386 libdrm-common all 2.4.120-2 [7688 B] Get: 227 http://deb.debian.org/debian unstable/main i386 libdrm2 i386 2.4.120-2 [41.4 kB] Get: 228 http://deb.debian.org/debian unstable/main i386 libdrm-amdgpu1 i386 2.4.120-2 [24.4 kB] Get: 229 http://deb.debian.org/debian unstable/main i386 libpciaccess0 i386 0.17-3+b1 [53.8 kB] Get: 230 http://deb.debian.org/debian unstable/main i386 libdrm-intel1 i386 2.4.120-2 [66.5 kB] Get: 231 http://deb.debian.org/debian unstable/main i386 libdrm-nouveau2 i386 2.4.120-2 [20.8 kB] Get: 232 http://deb.debian.org/debian unstable/main i386 libdrm-radeon1 i386 2.4.120-2 [23.0 kB] Get: 233 http://deb.debian.org/debian unstable/main i386 libglvnd0 i386 1.7.0-1+b1 [44.4 kB] Get: 234 http://deb.debian.org/debian unstable/main i386 libwayland-server0 i386 1.22.0-2.1+b1 [34.8 kB] Get: 235 http://deb.debian.org/debian unstable/main i386 libxcb-randr0 i386 1.17.0-1 [117 kB] Get: 236 http://deb.debian.org/debian unstable/main i386 libgbm1 i386 24.0.6-1+b1 [42.2 kB] Get: 237 http://deb.debian.org/debian unstable/main i386 libglapi-mesa i386 24.0.6-1+b1 [36.2 kB] Get: 238 http://deb.debian.org/debian unstable/main i386 libwayland-client0 i386 1.22.0-2.1+b1 [26.4 kB] Get: 239 http://deb.debian.org/debian unstable/main i386 libx11-xcb1 i386 2:1.8.7-1+b1 [232 kB] Get: 240 http://deb.debian.org/debian unstable/main i386 libxcb-dri2-0 i386 1.17.0-1 [106 kB] Get: 241 http://deb.debian.org/debian unstable/main i386 libxcb-dri3-0 i386 1.17.0-1 [107 kB] Get: 242 http://deb.debian.org/debian unstable/main i386 libxcb-present0 i386 1.17.0-1 [105 kB] Get: 243 http://deb.debian.org/debian unstable/main i386 libxcb-sync1 i386 1.17.0-1 [108 kB] Get: 244 http://deb.debian.org/debian unstable/main i386 libxcb-xfixes0 i386 1.17.0-1 [109 kB] Get: 245 http://deb.debian.org/debian unstable/main i386 libxshmfence1 i386 1.3-1+b1 [9028 B] Get: 246 http://deb.debian.org/debian unstable/main i386 libegl-mesa0 i386 24.0.6-1+b1 [129 kB] Get: 247 http://deb.debian.org/debian unstable/main i386 libegl1 i386 1.7.0-1+b1 [36.2 kB] Get: 248 http://deb.debian.org/debian unstable/main i386 libxcb-glx0 i386 1.17.0-1 [123 kB] Get: 249 http://deb.debian.org/debian unstable/main i386 libxfixes3 i386 1:6.0.0-2+b1 [20.7 kB] Get: 250 http://deb.debian.org/debian unstable/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 251 http://deb.debian.org/debian unstable/main i386 libvulkan1 i386 1.3.280.0-1 [132 kB] Get: 252 http://deb.debian.org/debian unstable/main i386 libllvm17t64 i386 1:17.0.6-11 [27.7 MB] Get: 253 http://deb.debian.org/debian unstable/main i386 libsensors-config all 1:3.6.0-9 [14.6 kB] Get: 254 http://deb.debian.org/debian unstable/main i386 libsensors5 i386 1:3.6.0-9 [35.4 kB] Get: 255 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dri i386 24.0.6-1+b1 [8455 kB] Get: 256 http://deb.debian.org/debian unstable/main i386 libglx-mesa0 i386 24.0.6-1+b1 [158 kB] Get: 257 http://deb.debian.org/debian unstable/main i386 libglx0 i386 1.7.0-1+b1 [38.0 kB] Get: 258 http://deb.debian.org/debian unstable/main i386 libgl1 i386 1.7.0-1+b1 [82.7 kB] Get: 259 http://deb.debian.org/debian unstable/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 260 http://deb.debian.org/debian unstable/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 261 http://deb.debian.org/debian unstable/main i386 libxau-dev i386 1:1.0.9-1+b1 [21.6 kB] Get: 262 http://deb.debian.org/debian unstable/main i386 libxdmcp-dev i386 1:1.1.2-3+b1 [41.5 kB] Get: 263 http://deb.debian.org/debian unstable/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 264 http://deb.debian.org/debian unstable/main i386 libpthread-stubs0-dev i386 0.4-1+b1 [5320 B] Get: 265 http://deb.debian.org/debian unstable/main i386 libxcb1-dev i386 1.17.0-1 [185 kB] Get: 266 http://deb.debian.org/debian unstable/main i386 libx11-dev i386 2:1.8.7-1+b1 [904 kB] Get: 267 http://deb.debian.org/debian unstable/main i386 libglx-dev i386 1.7.0-1+b1 [15.8 kB] Get: 268 http://deb.debian.org/debian unstable/main i386 libgl-dev i386 1.7.0-1+b1 [101 kB] Get: 269 http://deb.debian.org/debian unstable/main i386 libegl-dev i386 1.7.0-1+b1 [19.5 kB] Get: 270 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 271 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 272 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 273 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Get: 274 http://deb.debian.org/debian unstable/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 275 http://deb.debian.org/debian unstable/main i386 libevdev2 i386 1.13.1+dfsg-1+b1 [30.8 kB] Get: 276 http://deb.debian.org/debian unstable/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Get: 277 http://deb.debian.org/debian unstable/main i386 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 278 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 279 http://deb.debian.org/debian unstable/main i386 libglpk40 i386 5.0-1+b1 [420 kB] Get: 280 http://deb.debian.org/debian unstable/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-2+b1 [330 kB] Get: 281 http://deb.debian.org/debian unstable/main i386 libgmp-dev i386 2:6.3.0+dfsg-2+b1 [659 kB] Get: 282 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get: 283 http://deb.debian.org/debian unstable/main i386 libklu2 i386 1:7.7.0+dfsg-2 [91.5 kB] Get: 284 http://deb.debian.org/debian unstable/main i386 libldl3 i386 1:7.7.0+dfsg-2 [23.6 kB] Get: 285 http://deb.debian.org/debian unstable/main i386 libsuitesparse-mongoose3 i386 1:7.7.0+dfsg-2 [52.8 kB] Get: 286 http://deb.debian.org/debian unstable/main i386 libumfpack6 i386 1:7.7.0+dfsg-2 [308 kB] Get: 287 http://deb.debian.org/debian unstable/main i386 librbio4 i386 1:7.7.0+dfsg-2 [43.7 kB] Get: 288 http://deb.debian.org/debian unstable/main i386 libspqr4 i386 1:7.7.0+dfsg-2 [159 kB] Get: 289 http://deb.debian.org/debian unstable/main i386 libspex3 i386 1:7.7.0+dfsg-2 [66.1 kB] Get: 290 http://deb.debian.org/debian unstable/main i386 libparu0 i386 1:7.7.0+dfsg-2 [76.2 kB] Get: 291 http://deb.debian.org/debian unstable/main i386 libsuitesparse-dev i386 1:7.7.0+dfsg-2 [1673 kB] Get: 292 http://deb.debian.org/debian unstable/main i386 libglpk-dev i386 5.0-1+b1 [509 kB] Get: 293 http://deb.debian.org/debian unstable/main i386 libopengl0 i386 1.7.0-1+b1 [29.5 kB] Get: 294 http://deb.debian.org/debian unstable/main i386 libglu1-mesa i386 9.0.2-1.1+b1 [187 kB] Get: 295 http://deb.debian.org/debian unstable/main i386 libopengl-dev i386 1.7.0-1+b1 [5368 B] Get: 296 http://deb.debian.org/debian unstable/main i386 libglu1-mesa-dev i386 9.0.2-1.1+b1 [230 kB] Get: 297 http://deb.debian.org/debian unstable/main i386 libgudev-1.0-0 i386 238-5 [14.9 kB] Get: 298 http://deb.debian.org/debian unstable/main i386 libhdf5-103-1t64 i386 1.10.10+repack-3.3 [1178 kB] Get: 299 http://deb.debian.org/debian unstable/main i386 libhdf5-cpp-103-1t64 i386 1.10.10+repack-3.3 [138 kB] Get: 300 http://deb.debian.org/debian unstable/main i386 libhdf5-fortran-102t64 i386 1.10.10+repack-3.3 [98.2 kB] Get: 301 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-100t64 i386 1.10.10+repack-3.3 [74.4 kB] Get: 302 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-fortran-100t64 i386 1.10.10+repack-3.3 [41.8 kB] Get: 303 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-cpp-100t64 i386 1.10.10+repack-3.3 [21.8 kB] Get: 304 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3 [303 kB] Get: 305 http://deb.debian.org/debian unstable/main i386 libjpeg-dev i386 1:2.1.5-3 [71.9 kB] Get: 306 http://deb.debian.org/debian unstable/main i386 libssl-dev i386 3.2.1-3 [2744 kB] Get: 307 http://deb.debian.org/debian unstable/main i386 libhdf5-dev i386 1.10.10+repack-3.3 [2772 kB] Get: 308 http://deb.debian.org/debian unstable/main i386 libwacom-common all 2.10.0-2 [62.5 kB] Get: 309 http://deb.debian.org/debian unstable/main i386 libwacom9 i386 2.10.0-2 [23.8 kB] Get: 310 http://deb.debian.org/debian unstable/main i386 libinput-bin i386 1.25.0-1+b2 [25.2 kB] Get: 311 http://deb.debian.org/debian unstable/main i386 libmtdev1t64 i386 1.1.6-1.2 [22.6 kB] Get: 312 http://deb.debian.org/debian unstable/main i386 libinput10 i386 1.25.0-1+b2 [144 kB] Get: 313 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 314 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2023.20230311.66589-9+b2 [157 kB] Get: 315 http://deb.debian.org/debian unstable/main i386 libmd4c0 i386 0.4.8-1+b1 [45.2 kB] Get: 316 http://deb.debian.org/debian unstable/main i386 libmime-charset-perl all 1.013.1-2 [34.0 kB] Get: 317 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 1.1.29+b1 [9280 B] Get: 318 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.42-4+b1 [244 kB] Get: 319 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 320 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b1 [24.2 kB] Get: 321 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2023.20230311.66589-9+b2 [48.3 kB] Get: 322 http://deb.debian.org/debian unstable/main i386 shared-mime-info i386 2.4-4 [760 kB] Get: 323 http://deb.debian.org/debian unstable/main i386 libqt5core5t64 i386 5.15.10+dfsg-7.2+b1 [2696 kB] Get: 324 http://deb.debian.org/debian unstable/main i386 libqt5concurrent5t64 i386 5.15.10+dfsg-7.2+b1 [44.6 kB] Get: 325 http://deb.debian.org/debian unstable/main i386 libqt5dbus5t64 i386 5.15.10+dfsg-7.2+b1 [237 kB] Get: 326 http://deb.debian.org/debian unstable/main i386 libqt5network5t64 i386 5.15.10+dfsg-7.2+b1 [766 kB] Get: 327 http://deb.debian.org/debian unstable/main i386 libxcb-icccm4 i386 0.4.1-1.1+b1 [27.5 kB] Get: 328 http://deb.debian.org/debian unstable/main i386 libxcb-util1 i386 0.4.0-1+b1 [23.6 kB] Get: 329 http://deb.debian.org/debian unstable/main i386 libxcb-image0 i386 0.4.0-2+b1 [22.8 kB] Get: 330 http://deb.debian.org/debian unstable/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB] Get: 331 http://deb.debian.org/debian unstable/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB] Get: 332 http://deb.debian.org/debian unstable/main i386 libxcb-shape0 i386 1.17.0-1 [105 kB] Get: 333 http://deb.debian.org/debian unstable/main i386 libxcb-xinerama0 i386 1.17.0-1 [105 kB] Get: 334 http://deb.debian.org/debian unstable/main i386 libxcb-xinput0 i386 1.17.0-1 [133 kB] Get: 335 http://deb.debian.org/debian unstable/main i386 libxcb-xkb1 i386 1.17.0-1 [131 kB] Get: 336 http://deb.debian.org/debian unstable/main i386 xkb-data all 2.41-2 [795 kB] Get: 337 http://deb.debian.org/debian unstable/main i386 libxkbcommon0 i386 1.6.0-1+b1 [115 kB] Get: 338 http://deb.debian.org/debian unstable/main i386 libxkbcommon-x11-0 i386 1.6.0-1+b1 [17.1 kB] Get: 339 http://deb.debian.org/debian unstable/main i386 libqt5gui5t64 i386 5.15.10+dfsg-7.2+b1 [5972 kB] Get: 340 http://deb.debian.org/debian unstable/main i386 libqt5widgets5t64 i386 5.15.10+dfsg-7.2+b1 [2665 kB] Get: 341 http://deb.debian.org/debian unstable/main i386 libqt5opengl5t64 i386 5.15.10+dfsg-7.2+b1 [163 kB] Get: 342 http://deb.debian.org/debian unstable/main i386 libqt5printsupport5t64 i386 5.15.10+dfsg-7.2+b1 [221 kB] Get: 343 http://deb.debian.org/debian unstable/main i386 libqt5sql5t64 i386 5.15.10+dfsg-7.2+b1 [135 kB] Get: 344 http://deb.debian.org/debian unstable/main i386 libqt5test5t64 i386 5.15.10+dfsg-7.2+b1 [154 kB] Get: 345 http://deb.debian.org/debian unstable/main i386 libqt5xml5t64 i386 5.15.10+dfsg-7.2+b1 [135 kB] Get: 346 http://deb.debian.org/debian unstable/main i386 libvulkan-dev i386 1.3.280.0-1 [1348 kB] Get: 347 http://deb.debian.org/debian unstable/main i386 libxext-dev i386 2:1.3.4-1+b1 [110 kB] Get: 348 http://deb.debian.org/debian unstable/main i386 qt5-qmake-bin i386 5.15.10+dfsg-7.2+b1 [1123 kB] Get: 349 http://deb.debian.org/debian unstable/main i386 qtchooser i386 66-2 [27.8 kB] Get: 350 http://deb.debian.org/debian unstable/main i386 qt5-qmake i386 5.15.10+dfsg-7.2+b1 [223 kB] Get: 351 http://deb.debian.org/debian unstable/main i386 qtbase5-dev-tools i386 5.15.10+dfsg-7.2+b1 [849 kB] Get: 352 http://deb.debian.org/debian unstable/main i386 qtbase5-dev i386 5.15.10+dfsg-7.2+b1 [1124 kB] Get: 353 http://deb.debian.org/debian unstable/main i386 libqt5opengl5-dev i386 5.15.10+dfsg-7.2+b1 [50.6 kB] Get: 354 http://deb.debian.org/debian unstable/main i386 libqt5svg5 i386 5.15.10-2+b2 [151 kB] Get: 355 http://deb.debian.org/debian unstable/main i386 libqt5svg5-dev i386 5.15.10-2+b2 [13.1 kB] Get: 356 http://deb.debian.org/debian unstable/main i386 libsombok3 i386 2.4.0-2+b1 [33.2 kB] Get: 357 http://deb.debian.org/debian unstable/main i386 libsqlite3-dev i386 3.45.3-1 [1173 kB] Get: 358 http://deb.debian.org/debian unstable/main i386 libsvm3 i386 3.24+ds-6+b1 [42.7 kB] Get: 359 http://deb.debian.org/debian unstable/main i386 libsvm-dev i386 3.24+ds-6+b1 [63.2 kB] Get: 360 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2023.20230311.66589-9+b2 [64.9 kB] Get: 361 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1 [284 kB] Get: 362 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2023.20230311.66589-9+b2 [128 kB] Get: 363 http://deb.debian.org/debian unstable/main i386 libunicode-linebreak-perl i386 0.0.20190101-1+b6 [97.6 kB] Get: 364 http://deb.debian.org/debian unstable/main i386 libwildmagic-common all 5.17+cleaned1-7 [7020 kB] Get: 365 http://deb.debian.org/debian unstable/main i386 libwildmagic5 i386 5.17+cleaned1-7+b1 [1594 kB] Get: 366 http://deb.debian.org/debian unstable/main i386 libwildmagic-dev i386 5.17+cleaned1-7+b1 [317 kB] Get: 367 http://deb.debian.org/debian unstable/main i386 libxerces-c3.2t64 i386 3.2.4+debian-1.3 [952 kB] Get: 368 http://deb.debian.org/debian unstable/main i386 libxerces-c-dev i386 3.2.4+debian-1.3 [1778 kB] Get: 369 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.1-1 [81.0 kB] Get: 370 http://deb.debian.org/debian unstable/main i386 libyaml-tiny-perl all 1.74-1 [30.7 kB] Get: 371 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.72+dfsg.1-1.2+b1 [58.1 kB] Get: 372 http://deb.debian.org/debian unstable/main i386 tex-common all 6.18 [32.5 kB] Get: 373 http://deb.debian.org/debian unstable/main i386 lmodern all 2.005-1 [9480 kB] Get: 374 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 375 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 376 http://deb.debian.org/debian unstable/main i386 tex-gyre all 20180621-6 [6209 kB] Get: 377 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2023.20230311.66589-9+b2 [8273 kB] Get: 378 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 379 http://deb.debian.org/debian unstable/main i386 texlive-base all 2023.20240207-1 [22.0 MB] Get: 380 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2023.20240207-1 [1255 kB] Get: 381 http://deb.debian.org/debian unstable/main i386 texlive-luatex all 2023.20240207-1 [25.9 MB] Get: 382 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2023.20240207-1 [29.0 MB] Get: 383 http://deb.debian.org/debian unstable/main i386 texlive-extra-utils all 2023.20240207-1 [63.3 MB] Get: 384 http://deb.debian.org/debian unstable/main i386 texlive-font-utils all 2023.20240207-1 [7046 kB] Get: 385 http://deb.debian.org/debian unstable/main i386 texlive-fonts-extra all 2023.20240207-1 [629 MB] Get: 386 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2023.20240207-1 [4990 kB] Get: 387 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2023.20240207-1 [8843 kB] Get: 388 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2023.20240207-1 [16.7 MB] Get: 389 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2023.20240207-1 [19.7 MB] Fetched 1143 MB in 23s (49.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libfftw3-double3:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19680 files and directories currently installed.) Preparing to unpack .../00-libfftw3-double3_3.3.10-1+b2_i386.deb ... Unpacking libfftw3-double3:i386 (3.3.10-1+b2) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../01-libexpat1_2.6.2-1_i386.deb ... Unpacking libexpat1:i386 (2.6.2-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../02-libbrotli1_1.1.0-2+b3_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../03-libpng16-16t64_1.6.43-5_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.43-5) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../04-libfreetype6_2.13.2+dfsg-1+b4_i386.deb ... Unpacking libfreetype6:i386 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../05-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../06-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../07-libfontenc1_1%3a1.1.8-1_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.8-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../08-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../09-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../10-xfonts-utils_1%3a7.7+6_i386.deb ... Unpacking xfonts-utils (1:7.7+6) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../11-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../12-fontconfig-config_2.15.0-1.1_i386.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../13-libfontconfig1_2.15.0-1.1_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-1.1) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../14-libsharpyuv0_1.3.2-0.4+b1_i386.deb ... Unpacking libsharpyuv0:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libdav1d7:i386. Preparing to unpack .../15-libdav1d7_1.4.1-1_i386.deb ... Unpacking libdav1d7:i386 (1.4.1-1) ... Selecting previously unselected package libheif-plugin-dav1d:i386. Preparing to unpack .../16-libheif-plugin-dav1d_1.17.6-1+b2_i386.deb ... Unpacking libheif-plugin-dav1d:i386 (1.17.6-1+b2) ... Selecting previously unselected package libde265-0:i386. Preparing to unpack .../17-libde265-0_1.0.15-1+b1_i386.deb ... Unpacking libde265-0:i386 (1.0.15-1+b1) ... Selecting previously unselected package libheif-plugin-libde265:i386. Preparing to unpack .../18-libheif-plugin-libde265_1.17.6-1+b2_i386.deb ... Unpacking libheif-plugin-libde265:i386 (1.17.6-1+b2) ... Selecting previously unselected package libheif1:i386. Preparing to unpack .../19-libheif1_1.17.6-1+b2_i386.deb ... Unpacking libheif1:i386 (1.17.6-1+b2) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../20-libjbig0_2.1-6.1+b1_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1+b1) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../21-libjpeg62-turbo_1%3a2.1.5-3_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-3) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../22-liblcms2-2_2.14-2+b1_i386.deb ... Unpacking liblcms2-2:i386 (2.14-2+b1) ... Selecting previously unselected package libglib2.0-0t64:i386. Preparing to unpack .../23-libglib2.0-0t64_2.78.4-7_i386.deb ... Unpacking libglib2.0-0t64:i386 (2.78.4-7) ... Selecting previously unselected package liblqr-1-0:i386. Preparing to unpack .../24-liblqr-1-0_0.4.2-2.1+b1_i386.deb ... Unpacking liblqr-1-0:i386 (0.4.2-2.1+b1) ... Selecting previously unselected package libltdl7:i386. Preparing to unpack .../25-libltdl7_2.4.7-7+b1_i386.deb ... Unpacking libltdl7:i386 (2.4.7-7+b1) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../26-libopenjp2-7_2.5.0-2+b3_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.0-2+b3) ... Selecting previously unselected package libraw23t64:i386. Preparing to unpack .../27-libraw23t64_0.21.2-2.1_i386.deb ... Unpacking libraw23t64:i386 (0.21.2-2.1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../28-libdeflate0_1.20-1_i386.deb ... Unpacking libdeflate0:i386 (1.20-1) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../29-liblerc4_4.0.0+ds-4+b1_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-4+b1) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../30-libwebp7_1.3.2-0.4+b1_i386.deb ... Unpacking libwebp7:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../31-libtiff6_4.5.1+git230720-4_i386.deb ... Unpacking libtiff6:i386 (4.5.1+git230720-4) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../32-libwebpdemux2_1.3.2-0.4+b1_i386.deb ... Unpacking libwebpdemux2:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../33-libwebpmux3_1.3.2-0.4+b1_i386.deb ... Unpacking libwebpmux3:i386 (1.3.2-0.4+b1) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../34-libxau6_1%3a1.0.9-1+b1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-1+b1) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../35-libbsd0_0.12.2-1_i386.deb ... Unpacking libbsd0:i386 (0.12.2-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../36-libxdmcp6_1%3a1.1.2-3+b1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../37-libxcb1_1.17.0-1_i386.deb ... Unpacking libxcb1:i386 (1.17.0-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../38-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../39-libx11-6_2%3a1.8.7-1+b1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.7-1+b1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../40-libxext6_2%3a1.3.4-1+b1_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../41-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../42-libxml2_2.9.14+dfsg-1.3+b3_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package imagemagick-6-common. Preparing to unpack .../43-imagemagick-6-common_8%3a6.9.12.98+dfsg1-5.2_all.deb ... Unpacking imagemagick-6-common (8:6.9.12.98+dfsg1-5.2) ... Selecting previously unselected package libmagickcore-6.q16-7t64:i386. Preparing to unpack .../44-libmagickcore-6.q16-7t64_8%3a6.9.12.98+dfsg1-5.2_i386.deb ... Unpacking libmagickcore-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Selecting previously unselected package libmagickwand-6.q16-7t64:i386. Preparing to unpack .../45-libmagickwand-6.q16-7t64_8%3a6.9.12.98+dfsg1-5.2_i386.deb ... Unpacking libmagickwand-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Selecting previously unselected package poppler-data. Preparing to unpack .../46-poppler-data_0.4.12-1_all.deb ... Unpacking poppler-data (0.4.12-1) ... Selecting previously unselected package libpython3.11-minimal:i386. Preparing to unpack .../47-libpython3.11-minimal_3.11.9-1_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.9-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../48-python3.11-minimal_3.11.9-1_i386.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:i386 (3.11.9-1) ... Setting up libexpat1:i386 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21809 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_i386.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../5-libreadline8t64_8.2-4_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_i386.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:i386. 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Regenerating fonts cache... done. Setting up libavif16:i386 (1.0.4-2) ... Setting up libcholmod5:i386 (1:7.7.0+dfsg-2) ... Setting up libdrm-nouveau2:i386 (2.4.120-2) ... Setting up libxcb1-dev:i386 (1.17.0-1) ... Setting up libxpm4:i386 (1:3.5.17-1+b1) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b1) ... Setting up libcurl4t64:i386 (8.7.1-5) ... Setting up libgbm1:i386 (24.0.6-1+b1) ... Setting up libspqr4:i386 (1:7.7.0+dfsg-2) ... Setting up libsombok3:i386 (2.4.0-2+b1) ... Setting up libdrm-radeon1:i386 (2.4.120-2) ... Setting up libboost-iostreams1.83-dev:i386 (1.83.0-2.1+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.9-1) ... Setting up coinor-libosi-dev:i386 (0.108.10+ds-1) ... Setting up libpango-1.0-0:i386 (1.52.2+ds-1) ... Setting up libdrm-intel1:i386 (2.4.120-2) ... Setting up libgl1-mesa-dri:i386 (24.0.6-1+b1) ... Setting up libx11-dev:i386 (2:1.8.7-1+b1) ... Setting up libcurl3t64-gnutls:i386 (8.7.1-5) ... Setting up libxext6:i386 (2:1.3.4-1+b1) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Setting up libclang1-16t64 (1:16.0.6-26) ... Setting up libxerces-c3.2t64:i386 (3.2.4+debian-1.3) ... Setting up xfonts-utils (1:7.7+6) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-26) ... Setting up libcairo2:i386 (1.18.0-3+b1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libqt5core5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libegl-mesa0:i386 (24.0.6-1+b1) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b1) ... Setting up libcurl4-openssl-dev:i386 (8.7.1-5) ... Setting up libklu2:i386 (1:7.7.0+dfsg-2) ... Setting up libxerces-c-dev:i386 (3.2.4+debian-1.3) ... Setting up coinor-libclp1:i386 (1.17.9+ds-1) ... Setting up libunicode-linebreak-perl (0.0.20190101-1+b6) ... Setting up libxt6t64:i386 (1:1.2.1-1.2) ... Setting up coinor-libclp-dev:i386 (1.17.9+ds-1) ... Setting up libxext-dev:i386 (2:1.3.4-1+b1) ... Setting up libumfpack6:i386 (1:7.7.0+dfsg-2) ... Setting up lmodern (2.005-1) ... Setting up libegl1:i386 (1.7.0-1+b1) ... Setting up libqt5sql5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up cmake (3.29.2-2) ... Setting up coinor-libcgl1:i386 (0.60.8+ds-1) ... Setting up libpangoft2-1.0-0:i386 (1.52.2+ds-1) ... Setting up libhdf5-103-1t64:i386 (1.10.10+repack-3.3) ... Setting up libcups2t64:i386 (2.4.7-1.2+b1) ... Setting up tex-gyre (20180621-6) ... Setting up libpangocairo-1.0-0:i386 (1.52.2+ds-1) ... Setting up libpython3-stdlib:i386 (3.11.8-1) ... Setting up coinor-libcgl-dev:i386 (0.60.8+ds-1) ... Setting up libhdf5-hl-100t64:i386 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b2) ... Setting up libqt5dbus5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libglx-mesa0:i386 (24.0.6-1+b1) ... Setting up libxi6:i386 (2:1.8.1-1) ... Setting up libglx0:i386 (1.7.0-1+b1) ... Setting up libqt5concurrent5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up preview-latex-style (13.2-1) ... Setting up libhdf5-cpp-103-1t64:i386 (1.10.10+repack-3.3) ... Setting up libqt5network5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libhdf5-fortran-102t64:i386 (1.10.10+repack-3.3) ... Setting up libqt5xml5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up debhelper (13.15.3) ... Setting up libparu0:i386 (1:7.7.0+dfsg-2) ... Setting up python3 (3.11.8-1) ... Setting up dh-exec (0.29) ... Setting up libxaw7:i386 (2:1.0.14-1+b2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libqt5test5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up qtbase5-dev-tools (5.15.10+dfsg-7.2+b1) ... Setting up libgl1:i386 (1.7.0-1+b1) ... Setting up coinor-libcbc3.1:i386 (2.10.11+ds1-2) ... Setting up texlive-binaries (2023.20230311.66589-9+b2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libglx-dev:i386 (1.7.0-1+b1) ... Setting up libhdf5-hl-cpp-100t64:i386 (1.10.10+repack-3.3) ... Setting up coinor-libcbc-dev:i386 (2.10.11+ds1-2) ... Setting up texlive-base (2023.20240207-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libgl-dev:i386 (1.7.0-1+b1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up libgs10-common (10.03.0~dfsg-1) ... Setting up libvulkan-dev:i386 (1.3.280.0-1) ... Setting up libsuitesparse-dev:i386 (1:7.7.0+dfsg-2) ... Setting up libegl-dev:i386 (1.7.0-1+b1) ... Setting up texlive-luatex (2023.20240207-1) ... Setting up texlive-plain-generic (2023.20240207-1) ... Setting up libwildmagic5:i386 (5.17+cleaned1-7+b1) ... Setting up libhdf5-hl-fortran-100t64:i386 (1.10.10+repack-3.3) ... Setting up texlive-font-utils (2023.20240207-1) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up libqt5gui5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up texlive-latex-base (2023.20240207-1) ... Setting up texlive-extra-utils (2023.20240207-1) ... Setting up libglpk-dev:i386 (5.0-1+b1) ... Setting up texlive-fonts-extra (2023.20240207-1) ... Setting up texlive-latex-recommended (2023.20240207-1) ... Setting up libhdf5-dev (1.10.10+repack-3.3) ... update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglu1-mesa-dev:i386 (9.0.2-1.1+b1) ... Setting up texlive-pictures (2023.20240207-1) ... Setting up cppcheck (2.14.0-1) ... Setting up texlive-fonts-recommended (2023.20240207-1) ... Setting up libgs10:i386 (10.03.0~dfsg-1) ... Setting up libwildmagic-dev:i386 (5.17+cleaned1-7+b1) ... Setting up libqt5widgets5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5svg5:i386 (5.15.10-2+b2) ... Setting up texlive-latex-extra (2023.20240207-1) ... Setting up ghostscript (10.03.0~dfsg-1) ... Setting up libqt5svg5-dev:i386 (5.15.10-2+b2) ... Setting up libqt5opengl5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5printsupport5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up qtbase5-dev:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5opengl5-dev:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libheif-plugin-dav1d:i386 (1.17.6-1+b2) ... Setting up libheif-plugin-libde265:i386 (1.17.6-1+b2) ... Setting up libheif1:i386 (1.17.6-1+b2) ... Setting up libmagickcore-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Setting up libmagickwand-6.q16-7t64:i386 (8:6.9.12.98+dfsg1-5.2) ... Setting up libgd3:i386 (2.3.3-9+b3) ... Setting up libgvc6 (2.42.2-9+b1) ... Setting up imagemagick-6.q16 (8:6.9.12.98+dfsg1-5.2) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up graphviz (2.42.2-9+b1) ... Setting up imagemagick (8:6.9.12.98+dfsg1-5.2) ... Processing triggers for libc-bin (2.37-19) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.34-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/openms-2.6.0+cleaned1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openms_2.6.0+cleaned1-4_source.changes dpkg-buildpackage: info: source package openms dpkg-buildpackage: info: source version 2.6.0+cleaned1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Anton Gladky dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_auto_clean -O--buildsystem=cmake -O--no-parallel dh_autoreconf_clean -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' entering the override_dh_clean target # Remove the generated xpm icon files: rm -f debian/TOPPAS.xpm rm -f debian/TOPPView.xpm # Remove the generated topp.1 man page: rm -f debian/topp.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars debian/files rm -fr -- debian/libopenms2.6.0/ debian/tmp/ debian/libopenms-dev/ debian/topp/ debian/openms-common/ debian/openms-doc/ debian/openms/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' debian/rules build dh build --buildsystem=cmake --no-parallel dh_testdir -O--buildsystem=cmake -O--no-parallel dh_update_autotools_config -O--buildsystem=cmake -O--no-parallel dh_autoreconf -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_auto_configure -- \ -DDEBIAN_BUILD=ON \ -DHAS_XSERVER=OFF \ -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \ -DCMAKE_SKIP_RPATH=ON \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DOPENMS_CONTRIB_LIBS="/usr/lib;/usr/lib/i386-linux-gnu" \ -DCMAKE_BUILD_TYPE=release \ -DBOOST_USE_STATIC=OFF \ -DENABLE_STYLE_TESTING=OFF \ -DENABLE_TOPP_TESTING=OFF \ -DENABLE_CLASS_TESTING=OFF \ -DENABLE_PIPELINE_TESTING=OFF \ -DENABLE_TUTORIALS=ON \ -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0+cleaned1/debian cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DDEBIAN_BUILD=ON -DHAS_XSERVER=OFF -DCMAKE_FIND_LIBRARY_SUFFIXES=.so -DCMAKE_SKIP_RPATH=ON -DCMAKE_INSTALL_PREFIX=/usr -DOPENMS_CONTRIB_LIBS=/usr/lib\;/usr/lib/i386-linux-gnu -DCMAKE_BUILD_TYPE=release -DBOOST_USE_STATIC=OFF -DENABLE_STYLE_TESTING=OFF -DENABLE_TOPP_TESTING=OFF -DENABLE_CLASS_TESTING=OFF -DENABLE_PIPELINE_TESTING=OFF -DENABLE_TUTORIALS=ON -DSEQAN_INCLUDE_DIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at CMakeLists.txt:73 (include): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.29/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:73 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Building OpenMS 2.6.0 -- [CMake cannot track Git commits and branching, since Git or the .git folder was not found. ('-D GIT_TRACKING=On')] -- OpenMP support requested: ON -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Architecture: 32 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF -- Collection of usage statistics and update notifications enabled. -- If you don't want this information to be transmitted to our update sever, you can: -- - Switch the build variable ENABLE_UPDATE_CHECK to OFF to remove the functionality at build time. -- - Set the environment variable OPENMS_DISABLE_UPDATE_CHECK to disable the functionality at runtime. CMake Deprecation Warning at src/openswathalgo/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") CMake Deprecation Warning at src/openswathalgo/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openswathalgo/thirdparty/MIToolbox/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS CMake Deprecation Warning at src/openms/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/eol-bspline/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/evergreen/src/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/IsoSpec/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/openms/thirdparty/json/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found XercesC: /usr/lib/i386-linux-gnu/libxerces-c.so (found version "3.2.4") -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.83.0 -- Found SEQAN: /build/reproducible-path/openms-2.6.0+cleaned1/debian (found suitable version "1.4.2", minimum required is "1.4.0") -- Found LIBSVM: /usr/lib/i386-linux-gnu/libsvm.so (found suitable version "3.2.4", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib/i386-linux-gnu/libglpk.so -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.3.#define ZLIB_VERSION "1.3"") -- Found BZip2: /usr/lib/i386-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib/i386-linux-gnu/libbz2.so - found -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4") -- Found WM5: /usr/include/libwildmagic CMake Warning (dev) at /usr/share/cmake-3.29/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (SQLite) does not match the name of the calling package (SQLITE). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindSQLITE.cmake:201 (find_package_handle_standard_args) src/openms/cmake_findExternalLibs.cmake:134 (find_package) src/openms/CMakeLists.txt:70 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found SQLite: /usr/include (found version "3.45.3") -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.10.10") found components: C CXX HL -- Found Qt 5.15.10 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/resource.h -- Looking for C++ include sys/resource.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS CMake Deprecation Warning at src/superhirn/CMakeLists.txt:36 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Boost: /usr/include (found suitable version "1.83.0", minimum required is "1.48.0") -- Adding library SuperHirn -- Adding library SuperHirn - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.rc) found for SwathWizard. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. CMake Deprecation Warning at src/tests/CMakeLists.txt:35 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot CMake Warning (dev) at doc/CMakeLists.txt:142 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. This warning is for project developers. Use -Wno-dev to suppress it. -- Enabled tutorials (-D ENABLE_TUTORIALS=On). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done (12.5s) -- Generating done (3.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu # Prepare the xpm-formatted pixmaps for the Debian menu system. # Setting imagemagick to Build-Depends, for use of convert. convert src/openms_gui/source/VISUAL/ICONS/TOPPAS.png -resize 32x32 debian/TOPPAS.xpm convert src/openms_gui/source/VISUAL/ICONS/TOPPView.png -resize 32x32 debian/TOPPView.xpm make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' # Build the libs and executable binaries # Build the documentation, which needs a running XWindow server. We # thus use the doc_minimal target. # # ATTENTION, as of 20200514, the pdfLatex compilation fails with error # ! LaTeX Error: Command `\Bbbk' already defined. # This is why we commented out the doc_tutorials target below. # See also the override_dh_auto_configure target above, that disables # that specific doc_tutorials target. VERBOSE=1 \ dh_auto_build -- \ OpenMS GUI TOPP UTILS cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 OpenMS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 53 make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: In function 'void* checkedCalloc(size_t, size_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c:29:80: warning: format '%lu' expects argument of type 'long unsigned int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 29 | fprintf(stderr, "Error: %s\nAttempted to allocate %lu length of size %lu\n", strerror(errno), vectorLength, sizeOfType); | ~~^ ~~~~~~~~~~ | | | | long unsigned int size_t {aka unsigned int} | %u [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:69:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 69 | std::unary_function | ^~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/sstream:40, from /usr/include/c++/13/complex:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h:40: /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp: In function 'void OpenSwath::normalize(const std::vector&, double, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp:54:106: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = divides; _Tp = double]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 54 | std::transform(intensities.begin(), intensities.end(), normalized_intensities.begin(), std::bind2nd(std::divides(), normalizer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_function.h:1438: /usr/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:194:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 194 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -MD -MT src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -MF CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o.d -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp [ 1%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenSwathAlgo.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Automatic MOC for target OpenMS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/config.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_data_path.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/src/openms/include/OpenMS/openms_package_version.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DecoyGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/EnumHelpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Init.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/MacrosTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/RAIICleanup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HDF5Connector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/RegressionUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeQueryMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMoleculeGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/QueryMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/DBSuitability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FWHM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/PeptideMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/BuildInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/PythonInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DecoyGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Constants.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/RAIICleanup.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/DBSuitability.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FWHM.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/PeptideMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/ExternalProcess.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/PythonInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/ExternalProcess.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_ExternalProcess.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms/OpenMS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] creating build_config.h file ({event: PRE_BUILD}, {filename: build_config.h}) cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config_release.h /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include/OpenMS/build_config.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp:10, from /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/mocs_compilation.cpp:2: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/QMGZ3XHWZJ/../../../../../src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -MF CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ClassTest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Constants.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Exception.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/FuzzyStringComparator.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp: In constructor 'OpenMS::Exception::GlobalExceptionHandler::GlobalExceptionHandler()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:65:26: warning: 'void (* std::set_unexpected(unexpected_handler))()' is deprecated [-Wdeprecated-declarations] 65 | std::set_unexpected(terminate); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ In file included from /usr/include/c++/13/ios:41, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp:38: /usr/include/c++/13/exception:89:22: note: declared here 89 | unexpected_handler set_unexpected(unexpected_handler) _GLIBCXX_USE_NOEXCEPT; | ^~~~~~~~~~~~~~ [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Init.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogConfigHandler.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/LogStream.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/PrecisionWrapper.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/ProgressLogger.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/RAIICleanup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/RAIICleanup.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/SingletonRegistry.cpp [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/StreamHandler.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/TypeAsString.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/Types.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdGenerator.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdIndexer.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/UniqueIdInterface.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:23: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:144:42: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 144 | result = String(__DATE__) + ", " + __TIME__; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp: In static member function 'static OpenMS::VersionInfo::VersionDetails OpenMS::VersionInfo::getVersionStruct()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:169:51: warning: implicitly-declared 'OpenMS::VersionInfo::VersionDetails& OpenMS::VersionInfo::VersionDetails::operator=(const OpenMS::VersionInfo::VersionDetails&)' is deprecated [-Wdeprecated-copy] 169 | result = VersionDetails::create(getVersion()); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:79:7: note: because 'OpenMS::VersionInfo::VersionDetails' has user-provided 'OpenMS::VersionInfo::VersionDetails::VersionDetails(const OpenMS::VersionInfo::VersionDetails&)' 79 | VersionDetails(const VersionDetails & other): | ^~~~~~~~~~~~~~ [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/ExternalProcess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/ExternalProcess.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/File.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/FileWatcher.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/JavaInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/NetworkGetRequest.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/PythonInfo.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/RWrapper.cpp [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/StopWatch.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/SysInfo.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -MF CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SYSTEM/UpdateCheck.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/AveragePosition.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GaussFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/Histogram.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegression.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h:271:40: note: by 'OpenMS::Math::PosteriorErrorProbabilityModel& OpenMS::Math::PosteriorErrorProbabilityModel::operator=(const OpenMS::Math::PosteriorErrorProbabilityModel&)' 271 | PosteriorErrorProbabilityModel & operator=(const PosteriorErrorProbabilityModel & rhs); | ^~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/STATISTICS/ROCCurve.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BilinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/BSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/CubicSpline2d.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/GridSearch.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/LinearInterpolation.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MathFunctions.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/MSNumpress.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSAC.cpp [ 9%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModel.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelLinear.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/SplineBisection.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -MF CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/MATH/MISC/NNLS/NNLS.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Adduct.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ChargePair.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Compomer.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/hashtable_policy.h:36, from /usr/include/c++/13/bits/hashtable.h:35, from /usr/include/c++/13/bits/unordered_map.h:33, from /usr/include/c++/13/unordered_map:41, from /usr/include/c++/13/functional:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp [ 11%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVReference.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappings.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DPosition.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DRange.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DataValue.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Date.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DateTime.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/set:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'void OpenMS::LPWrapper::readProblem(const OpenMS::String&, const OpenMS::String&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:472:69: warning: unused parameter 'format' [-Wunused-parameter] 472 | void LPWrapper::readProblem(const String& filename, const String& format) // format=(LP,MPS,GLPK) | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: In member function 'OpenMS::Int OpenMS::LPWrapper::solve(SolverParam&, OpenMS::Size)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp:529:37: warning: unused parameter 'solver_param' [-Wunused-parameter] 529 | Int LPWrapper::solve(SolverParam& solver_param, const Size | ~~~~~~~~~~~~~^~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Map.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MassExplainer.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Matrix.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/Param.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/QTCluster.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringListUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/StringUtils.cpp [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1286:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:137:33: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:35: /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {OpenMS::Internal::ToolExternalDetails}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_uninitialized.h:384:41: required from '_ForwardIterator std::__uninitialized_move_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = OpenMS::Internal::ToolExternalDetails*; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Allocator = allocator]' /usr/include/c++/13/bits/vector.tcc:766:34: required from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator]' /usr/include/c++/13/bits/stl_vector.h:1486:19: required from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; iterator = std::vector::iterator; const_iterator = std::vector::const_iterator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:157:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/alloc_traits.h:33, from /usr/include/c++/13/ext/alloc_traits.h:34, from /usr/include/c++/13/bits/basic_string.h:39, from /usr/include/c++/13/string:54: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(OpenMS::Internal::ToolExternalDetails&&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Acquisition.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/AcquisitionInfo.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTerm.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermList.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/CVTermListInterface.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ContactPerson.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataArrays.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DataProcessing.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Digestion.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIDTagger.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/DocumentIdentifier.cpp [ 16%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ExperimentalSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Gradient.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/HPLC.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Identification.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IdentificationHit.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Instrument.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/InstrumentSettings.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonDetector.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/IonSource.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MassAnalyzer.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfo.cpp [ 18%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoDescription.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoInterface.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/MetaInfoRegistry.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Modification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideEvidence.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/PeptideIdentification.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Precursor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Product.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinHit.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Sample.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SampleTreatment.cpp [ 20%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ScanWindow.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Software.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SourceFile.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumIdentification.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/Tagging.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/AreaIterator.cpp [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/hashtable_policy.h:36, from /usr/include/c++/13/bits/hashtable.h:35, from /usr/include/c++/13/bits/unordered_map.h:33, from /usr/include/c++/13/unordered_map:41, from /usr/include/c++/13/functional:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConversionHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Feature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:51: In static member function 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = double; _Up = double; bool _IsMove = true]', inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = true; _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31, inlined from '_OI std::move(_II, _II, _OI) [with _II = double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:665:38, inlined from 'OpenMS::DPosition::DPosition(OpenMS::DPosition&&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:115:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/13/bits/move.h:197:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:211:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:881:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algo.h:1354:19: /usr/include/c++/13/bits/stl_algobase.h:437:30: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' forming offset 8 is out of the bounds [0, 8] of object '__tmp' with type 'OpenMS::DPosition<1>' [-Warray-bounds=] 437 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:36, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43: /usr/include/c++/13/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/13/bits/move.h:197:11: note: '__tmp' declared here 197 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ In static member function 'static void std::__copy_move::__assign_one(_Tp*, _Up*) [with _Tp = double; _Up = const double]', inlined from 'static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]' at /usr/include/c++/13/bits/stl_algobase.h:440:20, inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:506:30, inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:533:42, inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:540:31, inlined from '_OI std::copy(_II, _II, _OI) [with _II = const double*; _OI = double*]' at /usr/include/c++/13/bits/stl_algobase.h:633:7, inlined from 'OpenMS::DPosition& OpenMS::DPosition::operator=(const OpenMS::DPosition&) [with unsigned int D = 1; TCoordinateType = double]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:131:16, inlined from 'std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = OpenMS::DPosition<1>]' at /usr/include/c++/13/bits/move.h:199:11, inlined from 'void std::pair<_T1, _T2>::swap(std::pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:211:6, inlined from 'typename std::enable_if, std::__is_swappable<_T2> >::value>::type std::swap(pair<_T1, _T2>&, pair<_T1, _T2>&) [with _T1 = OpenMS::DPosition<1>; _T2 = unsigned int]' at /usr/include/c++/13/bits/stl_pair.h:881:15, inlined from 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator, unsigned int>*, vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algobase.h:185:11, inlined from '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]' at /usr/include/c++/13/bits/stl_algo.h:1354:19: /usr/include/c++/13/bits/stl_algobase.h:398:17: warning: '__tmp.OpenMS::DPosition<1, double>::coordinate_[0]' may be used uninitialized [-Wmaybe-uninitialized] 398 | { *__to = *__from; } | ~~~~~~^~~~~~~~~ /usr/include/c++/13/bits/move.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator, unsigned int>*, std::vector, unsigned int> > >]': /usr/include/c++/13/bits/move.h:197:11: note: '__tmp' declared here 197 | _Tp __tmp = _GLIBCXX_MOVE(__a); | ^~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/INTERFACES/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/PeakIndex.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RangeManager.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/RichPeak2D.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/StandardTypes.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/KERNEL/SpectrumHelper.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/AASequence.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/CrossLinksDB.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DecoyGenerator.cpp [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinition.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModificationsDB.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NASequence.cpp [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h:72:35: note: by 'OpenMS::NucleicAcidSpectrumGenerator& OpenMS::NucleicAcidSpectrumGenerator::operator=(const OpenMS::NucleicAcidSpectrumGenerator&)' 72 | NucleicAcidSpectrumGenerator& operator=(const NucleicAcidSpectrumGenerator& source); | ^~~~~~~~ [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Residue.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ResidueModification.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Ribonucleotide.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h:79:25: note: by 'OpenMS::SpectrumAnnotator& OpenMS::SpectrumAnnotator::operator=(const OpenMS::SpectrumAnnotator&)' 79 | SpectrumAnnotator & operator=(const SpectrumAnnotator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataArrays.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h:105:46: note: by 'OpenMS::SvmTheoreticalSpectrumGeneratorTrainer& OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::operator=(const OpenMS::SvmTheoreticalSpectrumGeneratorTrainer&)' 105 | SvmTheoreticalSpectrumGeneratorTrainer & operator=(const SvmTheoreticalSpectrumGeneratorTrainer & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp: In member function 'void OpenMS::SvmTheoreticalSpectrumGeneratorTrainer::trainModel(const OpenMS::PeakMap&, const std::vector&, OpenMS::String, OpenMS::Int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:797:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 797 | std::random_shuffle(training_data_by_class[0].begin(), training_data_by_class[0].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp:798:28: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 798 | std::random_shuffle(training_data_by_class[1].begin(), training_data_by_class[1].end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ [ 30%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Tagger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/WeightWrapper.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp [ 32%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/boost/assert/source_location.hpp:15, from /usr/include/boost/exception/exception.hpp:9, from /usr/include/boost/throw_exception.hpp:21, from /usr/include/boost/polymorphic_cast.hpp:79, from /usr/include/boost/cast.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Helpers.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: In member function 'void OpenMS::Internal::MzMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:94:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 94 | options_ = opt; | ^~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1286:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolExternalDetails]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:194:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:37: /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription]': /usr/include/c++/13/bits/alloc_traits.h:538:17: required from 'static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription; allocator_type = std::allocator]' /usr/include/c++/13/bits/stl_vector.h:1286:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator; value_type = OpenMS::Internal::ToolDescription]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:200:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /usr/include/c++/13/bits/new_allocator.h:191:11: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp [ 37%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Base64.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2Ifstream.cpp [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp: In member function 'virtual XMLSize_t OpenMS::Bzip2InputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp:73:71: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 73 | XMLSize_t actual_read = (XMLSize_t) bzip2_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CachedMzML.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CompressedInputSource.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CVMappingFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ControlledVocabulary.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/CsvFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTA2DFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/EDTAFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp: In member function 'void OpenMS::EDTAFile::load(const OpenMS::String&, OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:162:43: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 162 | consensus_map.getColumnHeaders()[0] = desc; | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp:282:45: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 282 | consensus_map.getColumnHeaders()[i] = fd; | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FASTAFile.cpp [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 41%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:504:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 504 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'bool OpenMS::FileHandler::loadExperiment(const OpenMS::String&, OpenMS::PeakMap&, OpenMS::FileTypes::Type, OpenMS::ProgressLogger::LogType, bool, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:599:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 599 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:609:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 609 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:619:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 619 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:628:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 628 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::storeExperiment(const OpenMS::String&, const OpenMS::PeakMap&, OpenMS::ProgressLogger::LogType)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:698:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 698 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:707:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 707 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:725:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 725 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp:743:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 743 | f.getOptions() = options_; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/FileTypes.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipIfstream.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp: In member function 'virtual XMLSize_t OpenMS::GzipInputStream::readBytes(XMLByte*, XMLSize_t)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp:74:70: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 74 | XMLSize_t actual_read = (XMLSize_t) gzip_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/HDF5Connector.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IdXMLFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp: In member function 'void OpenMS::IndexedMzMLFileLoader::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:60:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 60 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectInfile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/InspectOutfile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp:41: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/LibSVMEncoder.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MS2File.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSNumpressCoder.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h:72:15: note: by 'OpenMS::MSPFile& OpenMS::MSPFile::operator=(const OpenMS::MSPFile&)' 72 | MSPFile & operator=(const MSPFile & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h:67:23: note: by 'OpenMS::MSPGenericFile& OpenMS::MSPGenericFile::operator=(const OpenMS::MSPGenericFile&)' 67 | class OPENMS_DLLAPI MSPGenericFile : | ^~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSstatsFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotInfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h:61:23: note: by 'OpenMS::MascotGenericFile& OpenMS::MascotGenericFile::operator=(const OpenMS::MascotGenericFile&)' 61 | class OPENMS_DLLAPI MascotGenericFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:134:38: note: by 'OpenMS::MascotRemoteQuery& OpenMS::MascotRemoteQuery::operator=(const OpenMS::MascotRemoteQuery&)' 134 | OPENMS_DLLAPI MascotRemoteQuery& operator=(const MascotRemoteQuery& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::login()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:182:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 182 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtCore/QObject:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:188:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 188 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:194:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 194 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:199:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 199 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:204:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 204 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:209:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 209 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:214:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 214 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:219:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 219 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:224:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 224 | loginbytes.append(boundary_string); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:229:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 229 | loginbytes.append("--" + boundary + "--\r\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: In member function 'void OpenMS::MascotRemoteQuery::execQuery()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:355:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 355 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp:360:22: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations] 360 | querybytes.append("--" + boundary + "--\n"); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:1511:20: note: declared here 1511 | inline QByteArray &QByteArray::append(const QString &s) | ^~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SYSTEM/File.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp: In member function 'void OpenMS::MzDataFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp:65:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 65 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzIdentMLFile.cpp [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp: In member function 'void OpenMS::MzMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp:72:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 72 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SVOutStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp: In member function 'void OpenMS::MzXMLFile::setOptions(const OpenMS::PeakFileOptions&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp:64:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 64 | options_ = options; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSACSVFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OMSSAXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/OSWFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ParamXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PTMXMLFile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoInfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepNovoOutfile.cpp [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PepXMLFileMascot.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ProtXMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/QcMLFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestInfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SequestOutfile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqliteConnector.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SqMassFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/SwathFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/SVOutStream.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TextFile.cpp [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolDescription; _Args = {OpenMS::Internal::ToolDescription&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/13/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/bits/stl_algo.h:69, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:37: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_vector.h:606:31: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/13/bits/vector.tcc:257:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/TraMLFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/TransformationXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/UnimodXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp:34: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemInfile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/XTandemXMLFile.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -MF CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FORMAT/ZlibCompression.cpp [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h:84:31: note: by 'OpenMS::IsobaricChannelExtractor& OpenMS::IsobaricChannelExtractor::operator=(const OpenMS::IsobaricChannelExtractor&)' 84 | IsobaricChannelExtractor& operator=(const IsobaricChannelExtractor& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp: In member function 'void OpenMS::IsobaricChannelExtractor::registerChannelsInOutputMap_(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:751:49: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 751 | consensus_map.getColumnHeaders()[index] = channel_as_map; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h:66:25: note: by 'OpenMS::IsobaricQuantifier& OpenMS::IsobaricQuantifier::operator=(const OpenMS::IsobaricQuantifier&)' 66 | IsobaricQuantifier& operator=(const IsobaricQuantifier& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h:62:40: note: by 'OpenMS::ItraqEightPlexQuantitationMethod& OpenMS::ItraqEightPlexQuantitationMethod::operator=(const OpenMS::ItraqEightPlexQuantitationMethod&)' 62 | ItraqEightPlexQuantitationMethod & operator=(const ItraqEightPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h:60:38: note: by 'OpenMS::ItraqFourPlexQuantitationMethod& OpenMS::ItraqFourPlexQuantitationMethod::operator=(const OpenMS::ItraqFourPlexQuantitationMethod&)' 60 | ItraqFourPlexQuantitationMethod& operator=(const ItraqFourPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h:53:23: note: by 'OpenMS::PeptideAndProteinQuant& OpenMS::PeptideAndProteinQuant::operator=(const OpenMS::PeptideAndProteinQuant&)' 53 | class OPENMS_DLLAPI PeptideAndProteinQuant : | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h:69:23: note: by 'OpenMS::ProteinResolver& OpenMS::ProteinResolver::operator=(const OpenMS::ProteinResolver&)' 69 | ProteinResolver & operator=(const ProteinResolver & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h:79:38: note: by 'OpenMS::QuantitativeExperimentalDesign& OpenMS::QuantitativeExperimentalDesign::operator=(const OpenMS::QuantitativeExperimentalDesign&)' 79 | QuantitativeExperimentalDesign & operator=(const QuantitativeExperimentalDesign &); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h:62:40: note: by 'OpenMS::TMTSixteenPlexQuantitationMethod& OpenMS::TMTSixteenPlexQuantitationMethod::operator=(const OpenMS::TMTSixteenPlexQuantitationMethod&)' 62 | TMTSixteenPlexQuantitationMethod & operator=(const TMTSixteenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h:62:39: note: by 'OpenMS::TMTElevenPlexQuantitationMethod& OpenMS::TMTElevenPlexQuantitationMethod::operator=(const OpenMS::TMTElevenPlexQuantitationMethod&)' 62 | TMTElevenPlexQuantitationMethod & operator=(const TMTElevenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTSixPlexQuantitationMethod& OpenMS::TMTSixPlexQuantitationMethod::operator=(const OpenMS::TMTSixPlexQuantitationMethod&)' 62 | TMTSixPlexQuantitationMethod & operator=(const TMTSixPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h:54:23: note: by 'OpenMS::IsobaricQuantitationMethod& OpenMS::IsobaricQuantitationMethod::operator=(const OpenMS::IsobaricQuantitationMethod&)' 54 | class OPENMS_DLLAPI IsobaricQuantitationMethod : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h:62:36: note: by 'OpenMS::TMTTenPlexQuantitationMethod& OpenMS::TMTTenPlexQuantitationMethod::operator=(const OpenMS::TMTTenPlexQuantitationMethod&)' 62 | TMTTenPlexQuantitationMethod & operator=(const TMTTenPlexQuantitationMethod& rhs); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:51: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h:84:23: note: by 'OpenMS::AbsoluteQuantitation& OpenMS::AbsoluteQuantitation::operator=(const OpenMS::AbsoluteQuantitation&)' 84 | class OPENMS_DLLAPI AbsoluteQuantitation : | ^~~~~~~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(svm_problem*, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:611:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 611 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: In static member function 'static void OpenMS::SVMWrapper::createRandomPartitions(const OpenMS::SVMData&, OpenMS::Size, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp:679:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 679 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp: In member function 'void OpenMS::FeatureGroupingAlgorithm::transferSubelements(const std::vector&, OpenMS::ConsensusMap&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:93:52: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 93 | out.getColumnHeaders()[counter] = desc_it->second; | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h:88:39: note: by 'OpenMS::FeatureGroupingAlgorithmLabeled& OpenMS::FeatureGroupingAlgorithmLabeled::operator=(const OpenMS::FeatureGroupingAlgorithmLabeled&)' 88 | FeatureGroupingAlgorithmLabeled & operator=(const FeatureGroupingAlgorithmLabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h:224:33: note: by 'OpenMS::FeatureGroupingAlgorithmKD& OpenMS::FeatureGroupingAlgorithmKD::operator=(const OpenMS::FeatureGroupingAlgorithmKD&)' 224 | FeatureGroupingAlgorithmKD& operator=(const FeatureGroupingAlgorithmKD&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h:99:33: note: by 'OpenMS::FeatureGroupingAlgorithmQT& OpenMS::FeatureGroupingAlgorithmQT::operator=(const OpenMS::FeatureGroupingAlgorithmQT&)' 99 | FeatureGroupingAlgorithmQT& operator=(const FeatureGroupingAlgorithmQT&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:120:32: note: by 'OpenMS::FeatureGroupingAlgorithm& OpenMS::FeatureGroupingAlgorithm::operator=(const OpenMS::FeatureGroupingAlgorithm&)' 120 | FeatureGroupingAlgorithm & operator=(const FeatureGroupingAlgorithm &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h:136:41: note: by 'OpenMS::FeatureGroupingAlgorithmUnlabeled& OpenMS::FeatureGroupingAlgorithmUnlabeled::operator=(const OpenMS::FeatureGroupingAlgorithmUnlabeled&)' 136 | FeatureGroupingAlgorithmUnlabeled & operator=(const FeatureGroupingAlgorithmUnlabeled &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h:115:25: note: by 'OpenMS::LabeledPairFinder& OpenMS::LabeledPairFinder::operator=(const OpenMS::LabeledPairFinder&)' 115 | LabeledPairFinder & operator=(const LabeledPairFinder & source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h:110:42: note: by 'OpenMS::MapAlignmentAlgorithmPoseClustering& OpenMS::MapAlignmentAlgorithmPoseClustering::operator=(const OpenMS::MapAlignmentAlgorithmPoseClustering&)' 110 | MapAlignmentAlgorithmPoseClustering& operator=(const MapAlignmentAlgorithmPoseClustering&); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:431:18: warning: 'virtual void OpenMS::TOPPBase::registerOptionsAndFlags_()' was hidden [-Woverloaded-virtual=] 431 | virtual void registerOptionsAndFlags_() = 0; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h:123:8: note: by 'void OpenMS::TOPPMapAlignerBase::registerOptionsAndFlags_(const OpenMS::String&, ReferenceParameterKind)' 123 | void registerOptionsAndFlags_(const String& file_formats, | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h:174:38: note: by 'OpenMS::MapAlignmentAlgorithmTreeGuided& OpenMS::MapAlignmentAlgorithmTreeGuided::operator=(const OpenMS::MapAlignmentAlgorithmTreeGuided&)' 174 | MapAlignmentAlgorithmTreeGuided& operator=(const MapAlignmentAlgorithmTreeGuided&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:72:46: note: by 'OpenMS::MapAlignmentAlgorithmSpectrumAlignment& OpenMS::MapAlignmentAlgorithmSpectrumAlignment::operator=(const OpenMS::MapAlignmentAlgorithmSpectrumAlignment&)' 72 | MapAlignmentAlgorithmSpectrumAlignment & operator=(const MapAlignmentAlgorithmSpectrumAlignment &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h:66:23: note: by 'OpenMS::PoseClusteringAffineSuperimposer& OpenMS::PoseClusteringAffineSuperimposer::operator=(const OpenMS::PoseClusteringAffineSuperimposer&)' 66 | class OPENMS_DLLAPI PoseClusteringAffineSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h:86:23: note: by 'OpenMS::BaseSuperimposer& OpenMS::BaseSuperimposer::operator=(const OpenMS::BaseSuperimposer&)' 86 | BaseSuperimposer& operator=(const BaseSuperimposer&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h:64:23: note: by 'OpenMS::PoseClusteringShiftSuperimposer& OpenMS::PoseClusteringShiftSuperimposer::operator=(const OpenMS::PoseClusteringShiftSuperimposer&)' 64 | class OPENMS_DLLAPI PoseClusteringShiftSuperimposer : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:60:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 60 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h:160:23: note: by 'OpenMS::MorphologicalFilter& OpenMS::MorphologicalFilter::operator=(const OpenMS::MorphologicalFilter&)' 160 | class OPENMS_DLLAPI MorphologicalFilter : | ^~~~~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:95:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 95 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h:173:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 173 | public std::iterator | ^~~~~~~~ /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h:104:23: note: by 'OpenMS::QTClusterFinder& OpenMS::QTClusterFinder::operator=(const OpenMS::QTClusterFinder&)' 104 | class OPENMS_DLLAPI QTClusterFinder : | ^~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h:81:23: note: by 'OpenMS::SimplePairFinder& OpenMS::SimplePairFinder::operator=(const OpenMS::SimplePairFinder&)' 81 | class OPENMS_DLLAPI SimplePairFinder : | ^~~~~~~~~~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h:97:23: note: by 'OpenMS::BaseGroupFinder& OpenMS::BaseGroupFinder::operator=(const OpenMS::BaseGroupFinder&)' 97 | BaseGroupFinder & operator=(const BaseGroupFinder &); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h:109:23: note: by 'OpenMS::StablePairFinder& OpenMS::StablePairFinder::operator=(const OpenMS::StablePairFinder&)' 109 | class OPENMS_DLLAPI StablePairFinder : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h:109:23: note: by 'OpenMS::FeatureDistance& OpenMS::FeatureDistance::operator=(const OpenMS::FeatureDistance&)' 109 | FeatureDistance & operator=(const FeatureDistance & other); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp: In member function 'OpenMS::TransformationDescription::TransformationStatistics OpenMS::TransformationDescription::getStatistics() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:219:31: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 219 | if (data_.empty()) return s; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:260:12: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 260 | return s; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h:82:27: note: by 'OpenMS::FeatureDeconvolution& OpenMS::FeatureDeconvolution::operator=(const OpenMS::FeatureDeconvolution&)' 82 | FeatureDeconvolution& operator=(const FeatureDeconvolution& source); | ^~~~~~~~ [ 58%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h:82:37: note: by 'OpenMS::MetaboliteFeatureDeconvolution& OpenMS::MetaboliteFeatureDeconvolution::operator=(const OpenMS::MetaboliteFeatureDeconvolution&)' 82 | MetaboliteFeatureDeconvolution& operator=(const MetaboliteFeatureDeconvolution& source); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp:34: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h:58:23: note: by 'OpenMS::BasicProteinInferenceAlgorithm::operator=' 58 | class OPENMS_DLLAPI BasicProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h:75:23: note: by 'OpenMS::BayesianProteinInferenceAlgorithm& OpenMS::BayesianProteinInferenceAlgorithm::operator=(const OpenMS::BayesianProteinInferenceAlgorithm&)' 75 | class OPENMS_DLLAPI BayesianProteinInferenceAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:47:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 47 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: In member function 'long unsigned int OpenMS::BayesianProteinInferenceAlgorithm::GraphInferenceFunctor::operator()(OpenMS::Internal::IDBoostGraph::Graph&, unsigned int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Tensor.hpp:8, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/naive_convolve.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/p_convolve.hpp:11, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/PMF.hpp:5, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/LabeledPMF.hpp:7, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/InferenceEngine.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/BeliefPropagationInferenceEngine.hpp:4, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp:56, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:43: note: candidate 2: 'operator[](long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:272:73: note: candidate 2: 'operator[](long int* const, int)' (built-in) 272 | if (0 >= pmf.first_support()[0] && 0 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: In member function 'long unsigned int OpenMS::BayesianProteinInferenceAlgorithm::ExtendedGraphInferenceFunctor::operator()(OpenMS::Internal::IDBoostGraph::Graph&, unsigned int)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:43: note: candidate 2: 'operator[](long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:138:7: note: candidate 1: 'T& evergreen::Vector::operator[](long unsigned int) [with T = long int]' 138 | T & operator [](unsigned long i) { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:447:73: note: candidate 2: 'operator[](long int* const, int)' (built-in) 447 | if (1 >= pmf.first_support()[0] && 1 <= pmf.last_support()[0]) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: note: candidate 2: 'operator[](const long int* const, int)' (built-in) 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: warning: ISO C++ says that these are ambiguous, even though the worst conversion for the first is better than the worst conversion for the second: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp:131:13: note: candidate 1: 'const T& evergreen::Vector::operator[](long unsigned int) const [with T = long int]' 131 | const T & operator [](unsigned long i) const { | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:449:64: note: candidate 2: 'operator[](long int* const, int)' (built-in) 449 | posterior = pmf.table()[1 - pmf.first_support()[0]]; | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ In file included from /usr/include/string.h:535, from /usr/include/c++/13/cstring:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:42: In function 'void* memcpy(void*, const void*, size_t)', inlined from 'void evergreen::lsb_to_msb_with_existing_buffer(T*, T*) [with T = cpx; unsigned char NUM_BITS = 27]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/RecursiveShuffle.hpp:66:9: /usr/include/i386-linux-gnu/bits/string_fortified.h:29:33: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' pointer overflow between offset 1073741824 and size 1073741824 [-Warray-bounds=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h:60:34: note: by 'OpenMS::ConsensusIDAlgorithmAverage& OpenMS::ConsensusIDAlgorithmAverage::operator=(const OpenMS::ConsensusIDAlgorithmAverage&)' 60 | ConsensusIDAlgorithmAverage& operator=(const ConsensusIDAlgorithmAverage&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h:60:31: note: by 'OpenMS::ConsensusIDAlgorithmBest& OpenMS::ConsensusIDAlgorithmBest::operator=(const OpenMS::ConsensusIDAlgorithmBest&)' 60 | ConsensusIDAlgorithmBest& operator=(const ConsensusIDAlgorithmBest&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h:66:34: note: by 'OpenMS::ConsensusIDAlgorithmPEPIons& OpenMS::ConsensusIDAlgorithmPEPIons::operator=(const OpenMS::ConsensusIDAlgorithmPEPIons&)' 66 | ConsensusIDAlgorithmPEPIons& operator=(const ConsensusIDAlgorithmPEPIons&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h:181:36: note: by 'OpenMS::ConsensusIDAlgorithmPEPMatrix& OpenMS::ConsensusIDAlgorithmPEPMatrix::operator=(const OpenMS::ConsensusIDAlgorithmPEPMatrix&)' 181 | ConsensusIDAlgorithmPEPMatrix& operator=(const ConsensusIDAlgorithmPEPMatrix&); | ^~~~~~~~ [ 60%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h:66:32: note: by 'OpenMS::ConsensusIDAlgorithmRanks& OpenMS::ConsensusIDAlgorithmRanks::operator=(const OpenMS::ConsensusIDAlgorithmRanks&)' 66 | ConsensusIDAlgorithmRanks& operator=(const ConsensusIDAlgorithmRanks&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h:81:37: note: by 'OpenMS::ConsensusIDAlgorithmSimilarity& OpenMS::ConsensusIDAlgorithmSimilarity::operator=(const OpenMS::ConsensusIDAlgorithmSimilarity&)' 81 | ConsensusIDAlgorithmSimilarity& operator=(const ConsensusIDAlgorithmSimilarity&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h:146:27: note: by 'OpenMS::ConsensusIDAlgorithm& OpenMS::ConsensusIDAlgorithm::operator=(const OpenMS::ConsensusIDAlgorithm&)' 146 | ConsensusIDAlgorithm& operator=(const ConsensusIDAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h:86:35: note: by 'OpenMS::ConsensusIDAlgorithmIdentity& OpenMS::ConsensusIDAlgorithmIdentity::operator=(const OpenMS::ConsensusIDAlgorithmIdentity&)' 86 | ConsensusIDAlgorithmIdentity& operator=(const ConsensusIDAlgorithmIdentity&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h:60:32: note: by 'OpenMS::ConsensusIDAlgorithmWorst& OpenMS::ConsensusIDAlgorithmWorst::operator=(const OpenMS::ConsensusIDAlgorithmWorst&)' 60 | ConsensusIDAlgorithmWorst& operator=(const ConsensusIDAlgorithmWorst&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h:63:23: note: by 'OpenMS::ConsensusMapMergerAlgorithm::operator=' 63 | class OPENMS_DLLAPI ConsensusMapMergerAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:73:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 73 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h:258:23: note: by 'OpenMS::AccurateMassSearchEngine& OpenMS::AccurateMassSearchEngine::operator=(const OpenMS::AccurateMassSearchEngine&)' 258 | class OPENMS_DLLAPI AccurateMassSearchEngine : | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h:73:25: note: by 'OpenMS::FIAMSDataProcessor& OpenMS::FIAMSDataProcessor::operator=(const OpenMS::FIAMSDataProcessor&)' 73 | FIAMSDataProcessor& operator=(const FIAMSDataProcessor& fdp) = default; | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/HiddenMarkovModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDBoostGraph.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/stdexcept:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp:13, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h:40: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDMergerAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h:61:23: note: by 'OpenMS::IDMergerAlgorithm::operator=' 61 | class OPENMS_DLLAPI IDMergerAlgorithm: | ^~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDRipper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h:83:16: note: by 'OpenMS::IDRipper& OpenMS::IDRipper::operator=(const OpenMS::IDRipper&)' 83 | IDRipper & operator=(const IDRipper & rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDDecoyProbability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h:72:26: note: by 'OpenMS::IDDecoyProbability& OpenMS::IDDecoyProbability::operator=(const OpenMS::IDDecoyProbability&)' 72 | IDDecoyProbability & operator=(const IDDecoyProbability & rhs); | ^~~~~~~~ [ 62%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreGetterSetter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreSwitcherAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreSwitcherAlgorithm.h:47:23: note: by 'OpenMS::IDScoreSwitcherAlgorithm::operator=' 47 | class OPENMS_DLLAPI IDScoreSwitcherAlgorithm: | ^~~~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MessagePasserFactory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h:150:23: note: by 'OpenMS::MetaboliteSpectralMatching& OpenMS::MetaboliteSpectralMatching::operator=(const OpenMS::MetaboliteSpectralMatching&)' 150 | class OPENMS_DLLAPI MetaboliteSpectralMatching : | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideProteinResolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PrecursorPurity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ProtonDistributionModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h:89:31: note: by 'OpenMS::ProtonDistributionModel& OpenMS::ProtonDistributionModel::operator=(const OpenMS::ProtonDistributionModel&)' 89 | ProtonDistributionModel & operator=(const ProtonDistributionModel & pdm); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PeptideIndexing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:46:21: note: by 'OpenMS::SimpleSearchEngineAlgorithm::operator=' 46 | class OPENMS_DLLAPI SimpleSearchEngineAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:55: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:56: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:57: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:58: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:70: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp: In member function 'OpenMS::SimpleSearchEngineAlgorithm::ExitCodes OpenMS::SimpleSearchEngineAlgorithm::search(const OpenMS::String&, const OpenMS::String&, std::vector&, std::vector&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:411:22: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 411 | f.getOptions() = options; | ^~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:60: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:495:26: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 495 | std::random_shuffle(fasta_db.begin(), fasta_db.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:602:27: warning: implicitly-declared 'constexpr OpenMS::StringView& OpenMS::StringView::operator=(const OpenMS::StringView&)' is deprecated [-Wdeprecated-copy] 602 | ah.sequence = c; | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:504:5: note: because 'OpenMS::StringView' has user-provided 'OpenMS::StringView::StringView(const OpenMS::StringView&)' 504 | StringView(const StringView& s) : begin_(s.begin_), size_(s.size_) | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:571:26: required from 'static void OpenMS::IDFilter::keepMatchingItemsUnroll(IDContainer&, const Predicate&) [with IDContainer = std::vector; Predicate = HasMetaValue]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1184:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h: In instantiation of 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]': /usr/include/c++/13/bits/stl_algo.h:1638:19: required from 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' /usr/include/c++/13/bits/stl_algo.h:1910:25: required from 'void std::__partial_sort(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]' /usr/include/c++/13/bits/stl_algo.h:4751:26: required from 'void std::partial_sort(_RAIter, _RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = bool (*)(const OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&, const OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&)]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp:258:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h:72:12: warning: implicitly-declared 'constexpr OpenMS::StringView& OpenMS::StringView::operator=(const OpenMS::StringView&)' is deprecated [-Wdeprecated-copy] 72 | struct AnnotatedHit_ | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:504:5: note: because 'OpenMS::StringView' has user-provided 'OpenMS::StringView::StringView(const OpenMS::StringView&)' 504 | StringView(const StringView& s) : begin_(s.begin_), size_(s.size_) | ^~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algo.h:61: /usr/include/c++/13/bits/stl_heap.h:263:17: note: synthesized method 'OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_& OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_::operator=(OpenMS::SimpleSearchEngineAlgorithm::AnnotatedHit_&&)' first required here 263 | *__result = _GLIBCXX_MOVE(*__first); | ^ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:46:23: note: by 'OpenMS::SiriusAdapterAlgorithm::operator=' 46 | class OPENMS_DLLAPI SiriusAdapterAlgorithm : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/SiriusMSConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ [ 64%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h:118:24: note: by 'OpenMS::DeNovoIonScoring& OpenMS::DeNovoIonScoring::operator=(const OpenMS::DeNovoIonScoring&)' 118 | DeNovoIonScoring & operator=(const DeNovoIonScoring & rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h:70:23: note: by 'OpenMS::DeNovoAlgorithm& OpenMS::DeNovoAlgorithm::operator=(const OpenMS::DeNovoAlgorithm&)' 70 | DeNovoAlgorithm & operator=(const DeNovoAlgorithm & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h:70:25: note: by 'OpenMS::DeNovoPostScoring& OpenMS::DeNovoPostScoring::operator=(const OpenMS::DeNovoPostScoring&)' 70 | DeNovoPostScoring & operator=(const DeNovoPostScoring & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h:70:28: note: by 'OpenMS::DeNovoIdentification& OpenMS::DeNovoIdentification::operator=(const OpenMS::DeNovoIdentification&)' 70 | DeNovoIdentification & operator=(const DeNovoIdentification & rhs); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h:73:33: note: by 'OpenMS::CompNovoIdentificationCID& OpenMS::CompNovoIdentificationCID::operator=(const OpenMS::CompNovoIdentificationCID&)' 73 | CompNovoIdentificationCID & operator=(const CompNovoIdentificationCID & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h:77:34: note: by 'OpenMS::CompNovoIdentificationBase& OpenMS::CompNovoIdentificationBase::operator=(const OpenMS::CompNovoIdentificationBase&)' 77 | CompNovoIdentificationBase & operator=(const CompNovoIdentificationBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h:73:30: note: by 'OpenMS::CompNovoIdentification& OpenMS::CompNovoIdentification::operator=(const OpenMS::CompNovoIdentification&)' 73 | CompNovoIdentification & operator=(const CompNovoIdentification & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h:84:26: note: by 'OpenMS::CompNovoIonScoring& OpenMS::CompNovoIonScoring::operator=(const OpenMS::CompNovoIonScoring&)' 84 | CompNovoIonScoring & operator=(const CompNovoIonScoring & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h:107:34: note: by 'OpenMS::MassDecompositionAlgorithm& OpenMS::MassDecompositionAlgorithm::operator=(const OpenMS::MassDecompositionAlgorithm&)' 107 | MassDecompositionAlgorithm & operator=(const MassDecompositionAlgorithm & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:39: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h:102:30: note: by 'OpenMS::CompNovoIonScoringBase& OpenMS::CompNovoIonScoringBase::operator=(const OpenMS::CompNovoIonScoringBase&)' 102 | CompNovoIonScoringBase & operator=(const CompNovoIonScoringBase & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h:84:29: note: by 'OpenMS::CompNovoIonScoringCID& OpenMS::CompNovoIonScoringCID::operator=(const OpenMS::CompNovoIonScoringCID&)' 84 | CompNovoIonScoringCID & operator=(const CompNovoIonScoringCID & source); | ^~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/LocalLinearMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/MRMFragmentSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h:78:28: note: by 'OpenMS::MRMFragmentSelection& OpenMS::MRMFragmentSelection::operator=(const OpenMS::MRMFragmentSelection&)' 78 | MRMFragmentSelection & operator=(const MRMFragmentSelection & rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 66%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h:49:21: note: by 'OpenMS::KDTreeFeatureMaps& OpenMS::KDTreeFeatureMaps::operator=(const OpenMS::KDTreeFeatureMaps&)' 49 | class OPENMS_DLLAPI KDTreeFeatureMaps : public DefaultParamHandler | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/MRMMapping.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h:95:18: note: by 'OpenMS::MRMMapping& OpenMS::MRMMapping::operator=(const OpenMS::MRMMapping&)' 95 | MRMMapping & operator=(const MRMMapping & rhs); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:94:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 94 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:105:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 105 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h:52:23: note: by 'OpenMS::PrecursorIonSelection& OpenMS::PrecursorIonSelection::operator=(const OpenMS::PrecursorIonSelection&)' 52 | class OPENMS_DLLAPI PrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSLPFormulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h:63:42: note: by 'OpenMS::PrecursorIonSelectionPreprocessing& OpenMS::PrecursorIonSelectionPreprocessing::operator=(const OpenMS::PrecursorIonSelectionPreprocessing&)' 63 | PrecursorIonSelectionPreprocessing & operator=(const PrecursorIonSelectionPreprocessing & source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/PSProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h:52:23: note: by 'OpenMS::InclusionExclusionList::operator=' 52 | class OPENMS_DLLAPI InclusionExclusionList : | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/HyperScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp [ 67%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/MorpheusScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/PScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h:70:23: note: by 'OpenMS::AScore& OpenMS::AScore::operator=(const OpenMS::AScore&)' 70 | class OPENMS_DLLAPI AScore: public DefaultParamHandler | ^~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/RNPXL/RNPxlReport.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h:113:23: note: by 'OpenMS::OpenPepXLAlgorithm& OpenMS::OpenPepXLAlgorithm::operator=(const OpenMS::OpenPepXLAlgorithm&)' 113 | class OPENMS_DLLAPI OpenPepXLAlgorithm : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp:50: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h:103:23: note: by 'OpenMS::OpenPepXLLFAlgorithm& OpenMS::OpenPepXLLFAlgorithm::operator=(const OpenMS::OpenPepXLLFAlgorithm&)' 103 | class OPENMS_DLLAPI OpenPepXLLFAlgorithm : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:126:22: note: by 'OpenMS::PeptideIndexing& OpenMS::PeptideIndexing::operator=(const OpenMS::PeptideIndexing&)' 126 | class OPENMS_DLLAPI PeptideIndexing : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h:90:42: note: by 'OpenMS::TheoreticalSpectrumGeneratorXLMS& OpenMS::TheoreticalSpectrumGeneratorXLMS::operator=(const OpenMS::TheoreticalSpectrumGeneratorXLMS&)' 90 | TheoreticalSpectrumGeneratorXLMS & operator=(const TheoreticalSpectrumGeneratorXLMS & tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const Pattern >&, PatternAuxData&, Spawn&, AAcid) [with TNeedle = StringSet, Alloc<> > >; AAcid = SimpleType]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:27: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/bits/stl_tree.h:64: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLDataStructs.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h:65:23: note: by 'OpenMS::XFDRAlgorithm& OpenMS::XFDRAlgorithm::operator=(const OpenMS::XFDRAlgorithm&)' 65 | class OPENMS_DLLAPI XFDRAlgorithm : | ^~~~~~~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/XLMS/XQuestScores.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h:115:23: note: by 'OpenMS::SimpleTSGXLMS& OpenMS::SimpleTSGXLMS::operator=(const OpenMS::SimpleTSGXLMS&)' 115 | SimpleTSGXLMS & operator=(const SimpleTSGXLMS & tsg); | ^~~~~~~~ [ 69%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/BASELINE/MorphologicalFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/BernNorm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h:76:16: note: by 'OpenMS::BernNorm& OpenMS::BernNorm::operator=(const OpenMS::BernNorm&)' 76 | BernNorm & operator=(const BernNorm & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h:71:24: note: by 'OpenMS::ComplementMarker& OpenMS::ComplementMarker::operator=(const OpenMS::ComplementMarker&)' 71 | ComplementMarker & operator=(const ComplementMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h:71:24: note: by 'OpenMS::ComplementFilter& OpenMS::ComplementFilter::operator=(const OpenMS::ComplementFilter&)' 71 | ComplementFilter & operator=(const ComplementFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h:73:22: note: by 'OpenMS::GoodDiffFilter& OpenMS::GoodDiffFilter::operator=(const OpenMS::GoodDiffFilter&)' 73 | GoodDiffFilter & operator=(const GoodDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h:73:30: note: by 'OpenMS::IntensityBalanceFilter& OpenMS::IntensityBalanceFilter::operator=(const OpenMS::IntensityBalanceFilter&)' 73 | IntensityBalanceFilter & operator=(const IntensityBalanceFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h:70:25: note: by 'OpenMS::IsotopeDiffFilter& OpenMS::IsotopeDiffFilter::operator=(const OpenMS::IsotopeDiffFilter&)' 70 | IsotopeDiffFilter & operator=(const IsotopeDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h:77:21: note: by 'OpenMS::IsotopeMarker& OpenMS::IsotopeMarker::operator=(const OpenMS::IsotopeMarker&)' 77 | IsotopeMarker & operator=(const IsotopeMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/LinearResampler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/MarkerMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h:69:19: note: by 'OpenMS::MarkerMower& OpenMS::MarkerMower::operator=(const OpenMS::MarkerMower&)' 69 | MarkerMower & operator=(const MarkerMower & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NLargest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h:72:16: note: by 'OpenMS::NLargest& OpenMS::NLargest::operator=(const OpenMS::NLargest&)' 72 | NLargest & operator=(const NLargest & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h:71:29: note: by 'OpenMS::NeutralLossDiffFilter& OpenMS::NeutralLossDiffFilter::operator=(const OpenMS::NeutralLossDiffFilter&)' 71 | NeutralLossDiffFilter & operator=(const NeutralLossDiffFilter & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h:71:25: note: by 'OpenMS::NeutralLossMarker& OpenMS::NeutralLossMarker::operator=(const OpenMS::NeutralLossMarker&)' 71 | NeutralLossMarker & operator=(const NeutralLossMarker & source); | ^~~~~~~~ [ 71%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Normalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:39: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h:70:18: note: by 'OpenMS::Normalizer& OpenMS::Normalizer::operator=(const OpenMS::Normalizer&)' 70 | Normalizer & operator=(const Normalizer & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h:74:22: note: by 'OpenMS::ParentPeakMower& OpenMS::ParentPeakMower::operator=(const OpenMS::ParentPeakMower&)' 74 | ParentPeakMower& operator=(const ParentPeakMower& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/PeakMarker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h:62:18: note: by 'OpenMS::PeakMarker& OpenMS::PeakMarker::operator=(const OpenMS::PeakMarker&)' 62 | PeakMarker & operator=(const PeakMarker & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/Scaler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h:66:14: note: by 'OpenMS::Scaler& OpenMS::Scaler::operator=(const OpenMS::Scaler&)' 66 | Scaler & operator=(const Scaler & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/SqrtMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h:66:17: note: by 'OpenMS::SqrtMower& OpenMS::SqrtMower::operator=(const OpenMS::SqrtMower&)' 66 | SqrtMower & operator=(const SqrtMower & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/TICFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h:66:22: note: by 'OpenMS::ThresholdMower& OpenMS::ThresholdMower::operator=(const OpenMS::ThresholdMower&)' 66 | ThresholdMower & operator=(const ThresholdMower & source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/TRANSFORMERS/WindowMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/DataFilters.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/Deisotoper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:36: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h:76:23: note: by 'OpenMS::ElutionPeakDetection& OpenMS::ElutionPeakDetection::operator=(const OpenMS::ElutionPeakDetection&)' 76 | class OPENMS_DLLAPI ElutionPeakDetection : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h:177:23: note: by 'OpenMS::FeatureFindingMetabo& OpenMS::FeatureFindingMetabo::operator=(const OpenMS::FeatureFindingMetabo&)' 177 | class OPENMS_DLLAPI FeatureFindingMetabo : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 73%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h:72:25: note: by 'OpenMS::MassTraceDetection& OpenMS::MassTraceDetection::operator=(const OpenMS::MassTraceDetection&)' 72 | class OPENMS_DLLAPI MassTraceDetection : | ^~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/DATAREDUCTION/SplinePackage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/InternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:192:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 192 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/MZTrafoModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:38: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: At global scope: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h:192:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 192 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelLinear; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:105:22: required from 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, const OpenMS::Math::RANSACParam&) [with TModelType = OpenMS::Math::RansacModelLinear]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:205:61: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelQuadratic; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:105:22: required from 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, const OpenMS::Math::RANSACParam&) [with TModelType = OpenMS::Math::RansacModelQuadratic]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp:250:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/CALIBRATION/TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h:66:23: note: by 'OpenMS::TOFCalibration& OpenMS::TOFCalibration::operator=(const OpenMS::TOFCalibration&)' 66 | class OPENMS_DLLAPI TOFCalibration : | ^~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/LowessSmoothing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h:60:23: note: by 'OpenMS::LowessSmoothing& OpenMS::LowessSmoothing::operator=(const OpenMS::LowessSmoothing&)' 60 | class OPENMS_DLLAPI LowessSmoothing : | ^~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative<>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp:40:41: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian<>' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian<>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp:40:34: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/FILTERING/ID/IDFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static std::map > OpenMS::IDFilter::extractUnassignedProteins(OpenMS::ConsensusMap&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:274:54: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 274 | moveMatchingItems(prot_it->getHits(), std::not1(acc_filter), target.first->second); | ~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In lambda function: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:384:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 384 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::updateProteinReferences(std::vector&, const std::vector&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:432:28: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 432 | not1(acc_filter)); | ~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: In static member function 'static void OpenMS::IDFilter::removeUngroupedProteins(const std::vector&, std::vector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:498:59: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 498 | std::remove_if(hits.begin(), hits.end(), std::not1(HasMatchingAccessionUnordered(valid_accessions))), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::FilterPeptideEvidences(EvidenceFilter&, std::vector&) [with EvidenceFilter = DigestionFilter]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:485:68: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:726:35: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::DigestionFilter]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 726 | std::not1(filter)); | ~~~~~~~~~^~~~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::moveMatchingItems(Container&, const Predicate&, Container&) [with Container = std::vector; Predicate = std::unary_negate >]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:274:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:550:73: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = unary_negate >]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 550 | auto part = std::partition(items.begin(), items.end(), std::not1(pred)); | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccessionUnordered]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:311:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccessionUnordered]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinPeptideLength]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:569:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinPeptideLength]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMinCharge]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:592:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMinCharge]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasRTInRange]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:611:22: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasRTInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMZInRange]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:619:22: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMZInRange]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasLowMZError]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:630:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasLowMZError]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:647:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMaxMetaValue]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:650:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMaxMetaValue]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingModification]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:684:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingModification]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingSequence]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp:714:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingSequence]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1116:24: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasGoodScore]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:830:26: required from 'static void OpenMS::IDFilter::filterHitsByScore(std::vector&, double) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1125:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasGoodScore]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::ProteinIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1332:31: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: In instantiation of 'static void OpenMS::IDFilter::keepMatchingItems(Container&, const Predicate&) [with Container = std::vector; Predicate = HasMatchingAccession]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:965:26: required from 'static void OpenMS::IDFilter::keepHitsMatchingProteins(std::vector&, const std::set&) [with IdentificationType = OpenMS::PeptideIdentification]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:1342:35: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h:542:71: warning: 'constexpr std::unary_negate<_Predicate> std::not1(const _Predicate&) [with _Predicate = OpenMS::IDFilter::HasMatchingAccession]' is deprecated: use 'std::not_fn' instead [-Wdeprecated-declarations] 542 | items.erase(std::remove_if(items.begin(), items.end(), std::not1(pred)), | ~~~~~~~~~^~~~~~ /usr/include/c++/13/bits/stl_function.h:1046:5: note: declared here 1046 | not1(const _Predicate& __pred) | ^~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h:67:28: note: by 'virtual OpenMS::BiGaussModel& OpenMS::BiGaussModel::operator=(const OpenMS::BiGaussModel&)' 67 | virtual BiGaussModel & operator=(const BiGaussModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp [ 77%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h:75:36: note: by 'virtual OpenMS::ExtendedIsotopeModel& OpenMS::ExtendedIsotopeModel::operator=(const OpenMS::ExtendedIsotopeModel&)' 75 | virtual ExtendedIsotopeModel & operator=(const ExtendedIsotopeModel & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmIsotopeWavelet& OpenMS::FeatureFinderAlgorithmIsotopeWavelet::operator=(const OpenMS::FeatureFinderAlgorithmIsotopeWavelet&)' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmIsotopeWavelet : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h: In instantiation of 'void OpenMS::IsotopeWaveletTransform::identifyCharge(const OpenMS::MSSpectrum&, const OpenMS::MSSpectrum&, OpenMS::UInt, OpenMS::UInt, double, bool) [with PeakType = OpenMS::Peak1D; OpenMS::UInt = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp:224:30: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h:783:15: warning: implicitly-declared 'OpenMS::ConstRefVector::ConstRefVectorIterator& OpenMS::ConstRefVector::ConstRefVectorIterator::operator=(const OpenMS::ConstRefVector::ConstRefVectorIterator&)' is deprecated [-Wdeprecated-copy] 783 | for (iter = c_sorted_candidate.end() - 1; iter != c_sorted_candidate.begin(); --iter) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h:260:7: note: because 'OpenMS::ConstRefVector::ConstRefVectorIterator' has user-provided 'OpenMS::ConstRefVector::ConstRefVectorIterator::ConstRefVectorIterator(const OpenMS::ConstRefVector::ConstRefVectorIterator&) [with ValueT = const OpenMS::Peak1D; ContainerT = OpenMS::MSSpectrum]' 260 | ConstRefVectorIterator(const ConstRefVectorIterator& it) : | ^~~~~~~~~~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h:59:23: note: by 'OpenMS::FeatureFinderAlgorithmMRM::operator=' 59 | class OPENMS_DLLAPI FeatureFinderAlgorithmMRM : | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp:77:55: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h:309:35: note: by 'OpenMS::FeatureFinderAlgorithmPicked& OpenMS::FeatureFinderAlgorithmPicked::operator=(const OpenMS::FeatureFinderAlgorithmPicked&)' 309 | FeatureFinderAlgorithmPicked& operator=(const FeatureFinderAlgorithmPicked&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderIdentificationAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderIdentificationAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h:82:21: note: by 'OpenMS::EGHTraceFitter& OpenMS::EGHTraceFitter::operator=(const OpenMS::EGHTraceFitter&)' 82 | EGHTraceFitter& operator=(const EGHTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h:49:23: note: by 'OpenMS::ElutionModelFitter& OpenMS::ElutionModelFitter::operator=(const OpenMS::ElutionModelFitter&)' 49 | class OPENMS_DLLAPI ElutionModelFitter : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h:65:23: note: by 'OpenMS::SimpleSVM& OpenMS::SimpleSVM::operator=(const OpenMS::SimpleSVM&)' 65 | class OPENMS_DLLAPI SimpleSVM : | ^~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h:335:42: note: by 'OpenMS::MapAlignmentAlgorithmIdentification& OpenMS::MapAlignmentAlgorithmIdentification::operator=(const OpenMS::MapAlignmentAlgorithmIdentification&)' 335 | MapAlignmentAlgorithmIdentification& operator=(const MapAlignmentAlgorithmIdentification&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp: In member function 'void OpenMS::FeatureFinderIdentificationAlgorithm::getRandomSample_(std::map&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp:1309:19: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 1309 | random_shuffle(selection.begin(), selection.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:44: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h:56:21: note: by 'OpenMS::FeatureFinderMultiplexAlgorithm::operator=' 56 | class OPENMS_DLLAPI FeatureFinderMultiplexAlgorithm : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h:64:31: note: by 'virtual OpenMS::BiGaussFitter1D& OpenMS::BiGaussFitter1D::operator=(const OpenMS::BiGaussFitter1D&)' 64 | virtual BiGaussFitter1D & operator=(const BiGaussFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h:61:39: note: by 'virtual OpenMS::ExtendedIsotopeFitter1D& OpenMS::ExtendedIsotopeFitter1D::operator=(const OpenMS::ExtendedIsotopeFitter1D&)' 61 | virtual ExtendedIsotopeFitter1D & operator=(const ExtendedIsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h:62:29: note: by 'virtual OpenMS::GaussFitter1D& OpenMS::GaussFitter1D::operator=(const OpenMS::GaussFitter1D&)' 62 | virtual GaussFitter1D & operator=(const GaussFitter1D & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h:67:26: note: by 'virtual OpenMS::GaussModel& OpenMS::GaussModel::operator=(const OpenMS::GaussModel&)' 67 | virtual GaussModel & operator=(const GaussModel & source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: warning: 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h:57:23: note: by 'OpenMS::GaussTraceFitter& OpenMS::GaussTraceFitter::operator=(const OpenMS::GaussTraceFitter&)' 57 | GaussTraceFitter& operator=(const GaussTraceFitter& source); | ^~~~~~~~ [ 79%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: note: by 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' 71 | virtual MaxLikeliFitter1D & operator=(const MaxLikeliFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h:71:33: warning: 'virtual OpenMS::MaxLikeliFitter1D& OpenMS::MaxLikeliFitter1D::operator=(const OpenMS::MaxLikeliFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h:61:31: note: by 'virtual OpenMS::IsotopeFitter1D& OpenMS::IsotopeFitter1D::operator=(const OpenMS::IsotopeFitter1D&)' 61 | virtual IsotopeFitter1D & operator=(const IsotopeFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/streambuf:43, from /usr/include/c++/13/bits/streambuf_iterator.h:35, from /usr/include/c++/13/iterator:66, from /usr/include/boost/iterator/iterator_traits.hpp:10, from /usr/include/boost/range/iterator_range_core.hpp:26, from /usr/include/boost/lexical_cast.hpp:48, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/distributions/cauchy.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h:60:23: note: by 'OpenMS::MultiplexDeltaMassesGenerator::operator=' 60 | class OPENMS_DLLAPI MultiplexDeltaMassesGenerator : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:36: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp [ 81%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h:87:26: note: by 'virtual OpenMS::TraceFitter& OpenMS::TraceFitter::operator=(const OpenMS::TraceFitter&)' 87 | virtual TraceFitter& operator=(const TraceFitter& source); | ^~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/iomanip:42, from /usr/include/boost/math/policies/error_handling.hpp:12, from /usr/include/boost/math/special_functions/gamma.hpp:23, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h:40: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ [ 83%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/iomanip:42, from /usr/include/boost/math/policies/error_handling.hpp:12, from /usr/include/boost/math/special_functions/acosh.hpp:20, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:35: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h:78:23: note: by 'OpenMS::PeakPickerCWT& OpenMS::PeakPickerCWT::operator=(const OpenMS::PeakPickerCWT&)' 78 | class OPENMS_DLLAPI PeakPickerCWT : | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:103:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 103 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h:59:21: note: by 'OpenMS::FilterFunctor& OpenMS::FilterFunctor::operator=(const OpenMS::FilterFunctor&)' 59 | FilterFunctor & operator=(const FilterFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h:68:17: note: by 'OpenMS::TICFilter& OpenMS::TICFilter::operator=(const OpenMS::TICFilter&)' 68 | TICFilter & operator=(const TICFilter & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:70:9: required from 'class OpenMS::SignalToNoiseEstimatorMeanIterative' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:164:53: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMeanIterative': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp:164:53: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h:144:50: note: by 'OpenMS::SignalToNoiseEstimatorMeanIterative& OpenMS::SignalToNoiseEstimatorMeanIterative::operator=(const OpenMS::SignalToNoiseEstimatorMeanIterative&) [with Container = OpenMS::MSSpectrum]' 144 | inline SignalToNoiseEstimatorMeanIterative & operator=(const SignalToNoiseEstimatorMeanIterative & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:75:83: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:75:83: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:119:10: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:142:51: required from 'void OpenMS::PeakPickerHiRes::pick_(const ContainerType&, ContainerType&, std::vector&, bool) const [with ContainerType = OpenMS::MSChromatogram]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp:119:10: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:96:23: note: by 'OpenMS::PeakPickerIterative& OpenMS::PeakPickerIterative::operator=(const OpenMS::PeakPickerIterative&)' 96 | class OPENMS_DLLAPI PeakPickerIterative : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:212:20: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h:212:20: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h:48:23: note: by 'OpenMS::PeakPickerSH& OpenMS::PeakPickerSH::operator=(const OpenMS::PeakPickerSH&)' 48 | class OPENMS_DLLAPI PeakPickerSH : | ^~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -MF CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d -o CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:45: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:52: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h:140:40: note: by 'OpenMS::OptimizePeakDeconvolution& OpenMS::OptimizePeakDeconvolution::operator=(const OpenMS::OptimizePeakDeconvolution&)' 140 | inline OptimizePeakDeconvolution & operator=(const OptimizePeakDeconvolution & opt) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h:103:23: note: by 'OpenMS::TwoDOptimization& OpenMS::TwoDOptimization::operator=(const OpenMS::TwoDOptimization&)' 103 | TwoDOptimization& operator=(const TwoDOptimization& opt); | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/AverageLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:44: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp [ 84%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/CLUSTERING/SingleLinkage.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h:75:28: note: by 'OpenMS::BinnedSharedPeakCount& OpenMS::BinnedSharedPeakCount::operator=(const OpenMS::BinnedSharedPeakCount&)' 75 | BinnedSharedPeakCount& operator=(const BinnedSharedPeakCount& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h:79:35: note: by 'OpenMS::BinnedSumAgreeingIntensities& OpenMS::BinnedSumAgreeingIntensities::operator=(const OpenMS::BinnedSumAgreeingIntensities&)' 79 | BinnedSumAgreeingIntensities& operator=(const BinnedSumAgreeingIntensities& source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h:68:21: note: by 'OpenMS::PeakAlignment& OpenMS::PeakAlignment::operator=(const OpenMS::PeakAlignment&)' 68 | PeakAlignment & operator=(const PeakAlignment & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h:80:32: note: by 'OpenMS::SpectraSTSimilarityScore& OpenMS::SpectraSTSimilarityScore::operator=(const OpenMS::SpectraSTSimilarityScore&)' 80 | SpectraSTSimilarityScore & operator=(const SpectraSTSimilarityScore & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ [ 86%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h:89:30: note: by 'OpenMS::SpectrumAlignmentScore& OpenMS::SpectrumAlignmentScore::operator=(const OpenMS::SpectrumAlignmentScore&)' 89 | SpectrumAlignmentScore & operator=(const SpectrumAlignmentScore & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h:80:27: note: by 'OpenMS::SpectrumCheapDPCorr& OpenMS::SpectrumCheapDPCorr::operator=(const OpenMS::SpectrumCheapDPCorr&)' 80 | SpectrumCheapDPCorr & operator=(const SpectrumCheapDPCorr & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h:69:35: note: by 'OpenMS::SpectrumPrecursorComparator& OpenMS::SpectrumPrecursorComparator::operator=(const OpenMS::SpectrumPrecursorComparator&)' 69 | SpectrumPrecursorComparator & operator=(const SpectrumPrecursorComparator & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h:86:30: note: by 'OpenMS::SteinScottImproveScore& OpenMS::SteinScottImproveScore::operator=(const OpenMS::SteinScottImproveScore&)' 86 | SteinScottImproveScore & operator=(const SteinScottImproveScore & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -MF CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o.d -o CMakeFiles/OpenMS.dir/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h:74:28: note: by 'OpenMS::ZhangSimilarityScore& OpenMS::ZhangSimilarityScore::operator=(const OpenMS::ZhangSimilarityScore&)' 74 | ZhangSimilarityScore & operator=(const ZhangSimilarityScore & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DetectabilitySimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/DigestSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/numeric:75, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/EGHFitter1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h:62:27: note: by 'virtual OpenMS::EGHFitter1D& OpenMS::EGHFitter1D::operator=(const OpenMS::EGHFitter1D&)' 62 | virtual EGHFitter1D & operator=(const EGHFitter1D & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/IonizationSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp: In member function 'void OpenMS::IonizationSimulation::ionize(OpenMS::SimTypes::FeatureMapSim&, OpenMS::ConsensusMap&, OpenMS::SimTypes::MSSimExperiment&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp:149:46: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 149 | charge_consensus.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/MSSim.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h:68:23: note: by 'OpenMS::MSSim& OpenMS::MSSim::operator=(const OpenMS::MSSim&)' 68 | class OPENMS_DLLAPI MSSim : | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h:74:23: note: by 'OpenMS::DigestSimulation& OpenMS::DigestSimulation::operator=(const OpenMS::DigestSimulation&)' 74 | DigestSimulation& operator=(const DigestSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h:71:30: note: by 'OpenMS::DetectabilitySimulation& OpenMS::DetectabilitySimulation::operator=(const OpenMS::DetectabilitySimulation&)' 71 | DetectabilitySimulation& operator=(const DetectabilitySimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h:93:27: note: by 'OpenMS::IonizationSimulation& OpenMS::IonizationSimulation::operator=(const OpenMS::IonizationSimulation&)' 93 | IonizationSimulation& operator=(const IonizationSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RTSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h:78:19: note: by 'OpenMS::RTSimulation& OpenMS::RTSimulation::operator=(const OpenMS::RTSimulation&)' 78 | RTSimulation& operator=(const RTSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawMSSignalSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h:74:24: note: by 'virtual OpenMS::EGHModel& OpenMS::EGHModel::operator=(const OpenMS::EGHModel&)' 74 | virtual EGHModel & operator=(const EGHModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h:78:28: note: by 'virtual OpenMS::IsotopeModel& OpenMS::IsotopeModel::operator=(const OpenMS::IsotopeModel&)' 78 | virtual IsotopeModel & operator=(const IsotopeModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<2>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:65:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 2]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h:124:28: note: by 'virtual OpenMS::ProductModel<2>& OpenMS::ProductModel<2>::operator=(const OpenMS::ProductModel<2>&)' 124 | virtual ProductModel & operator=(const ProductModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h:82:28: note: by 'OpenMS::RawMSSignalSimulation& OpenMS::RawMSSignalSimulation::operator=(const OpenMS::RawMSSignalSimulation&)' 82 | RawMSSignalSimulation& operator=(const RawMSSignalSimulation& source); | ^~~~~~~~ [ 88%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/RawTandemMSSignalSimulation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h:75:34: note: by 'OpenMS::RawTandemMSSignalSimulation& OpenMS::RawTandemMSSignalSimulation::operator=(const OpenMS::RawTandemMSSignalSimulation&)' 75 | RawTandemMSSignalSimulation& operator=(const RawTandemMSSignalSimulation& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h:79:15: note: by 'OpenMS::IDMapper& OpenMS::IDMapper::operator=(const OpenMS::IDMapper&)' 79 | IDMapper& operator=(const IDMapper& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:153:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 153 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:164:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 164 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h:55:23: note: by 'OpenMS::PSLPFormulation& OpenMS::PSLPFormulation::operator=(const OpenMS::PSLPFormulation&)' 55 | class OPENMS_DLLAPI PSLPFormulation : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h:61:23: note: by 'OpenMS::OfflinePrecursorIonSelection& OpenMS::OfflinePrecursorIonSelection::operator=(const OpenMS::OfflinePrecursorIonSelection&)' 61 | class OPENMS_DLLAPI OfflinePrecursorIonSelection : | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h:205:39: note: by 'OpenMS::SvmTheoreticalSpectrumGenerator& OpenMS::SvmTheoreticalSpectrumGenerator::operator=(const OpenMS::SvmTheoreticalSpectrumGenerator&)' 205 | SvmTheoreticalSpectrumGenerator & operator=(const SvmTheoreticalSpectrumGenerator & tsg); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h:68:34: note: by 'OpenMS::PeakSpectrumCompareFunctor& OpenMS::PeakSpectrumCompareFunctor::operator=(const OpenMS::PeakSpectrumCompareFunctor&)' 68 | PeakSpectrumCompareFunctor & operator=(const PeakSpectrumCompareFunctor & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h:49: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h:84:25: note: by 'OpenMS::SpectrumAlignment& OpenMS::SpectrumAlignment::operator=(const OpenMS::SpectrumAlignment&)' 84 | SpectrumAlignment & operator=(const SpectrumAlignment & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:97:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 97 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:133:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 133 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:171:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 171 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:207:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 207 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:242:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 242 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:278:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 278 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:309:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 309 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:343:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 343 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:395:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 395 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:444:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 444 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:489:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 489 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:527:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 527 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:564:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 564 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:617:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 617 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h:663:10: warning: 'template struct std::unary_function' is deprecated [-Wdeprecated-declarations] 663 | std::unary_function | ^~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:117:12: note: declared here 117 | struct unary_function | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:75:11: note: by 'OpenMS::SpectraMerger::SpectraDistance_::operator=' 75 | class SpectraDistance_ : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h:146:20: note: by 'OpenMS::SpectraMerger& OpenMS::SpectraMerger::operator=(const OpenMS::SpectraMerger&)' 146 | SpectraMerger& operator=(const SpectraMerger& source); | ^~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/BaseLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:53:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 53 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ITRAQLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h:53:23: note: by 'OpenMS::ITRAQLabeler& OpenMS::ITRAQLabeler::operator=(const OpenMS::ITRAQLabeler&)' 53 | class OPENMS_DLLAPI ITRAQLabeler : | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/LabelFreeLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h:45:23: note: by 'OpenMS::LabelFreeLabeler& OpenMS::LabelFreeLabeler::operator=(const OpenMS::LabelFreeLabeler&)' 45 | class OPENMS_DLLAPI LabelFreeLabeler : | ^~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/O18Labeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h:49:23: note: by 'OpenMS::O18Labeler& OpenMS::O18Labeler::operator=(const OpenMS::O18Labeler&)' 49 | class OPENMS_DLLAPI O18Labeler : | ^~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp: In member function 'virtual void OpenMS::O18Labeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp:219:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 219 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/SILACLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h:50:23: note: by 'OpenMS::SILACLabeler& OpenMS::SILACLabeler::operator=(const OpenMS::SILACLabeler&)' 50 | class OPENMS_DLLAPI SILACLabeler : | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp: In member function 'virtual void OpenMS::SILACLabeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp:439:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 439 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -MF CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/SIMULATION/LABELING/ICPLLabeler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h:49:23: note: by 'OpenMS::BaseLabeler& OpenMS::BaseLabeler::operator=(const OpenMS::BaseLabeler&)' 49 | class OPENMS_DLLAPI BaseLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h:49:23: note: by 'OpenMS::ICPLLabeler& OpenMS::ICPLLabeler::operator=(const OpenMS::ICPLLabeler&)' 49 | class OPENMS_DLLAPI ICPLLabeler : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp: In member function 'virtual void OpenMS::ICPLLabeler::postDigestHook(OpenMS::SimTypes::FeatureMapSimVector&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp:399:40: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 399 | consensus_.getColumnHeaders()[0] = map_description; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:133:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 133 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Contaminants.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Contaminants.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Contaminants.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FragmentMassError.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/FragmentMassError.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h:69:18: note: by 'OpenMS::WindowMower& OpenMS::WindowMower::operator=(const OpenMS::WindowMower&)' 69 | WindowMower& operator=(const WindowMower& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/FWHM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/FWHM.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/FWHM.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MissedCleavages.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/MissedCleavages.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2IdentificationRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/Ms2SpectrumStats.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 90%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/MzCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/MzCalibration.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/MzCalibration.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/PeptideMass.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/PeptideMass.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/PeptideMass.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/QCBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/QCBase.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/RTAlignment.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/RTAlignment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp:34: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/RTAlignment.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/DBSuitability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h:183:25: note: by 'OpenMS::FalseDiscoveryRate& OpenMS::FalseDiscoveryRate::operator=(const OpenMS::FalseDiscoveryRate&)' 183 | FalseDiscoveryRate& operator=(const FalseDiscoveryRate&); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/DBSuitability.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/DBSuitability.h:66:23: note: by 'OpenMS::DBSuitability& OpenMS::DBSuitability::operator=(const OpenMS::DBSuitability&)' 66 | class OPENMS_DLLAPI DBSuitability: | ^~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -MF CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/QC/TIC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/TIC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:36: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:236:20: warning: identifier 'requires' is a keyword in C++20 [-Wc++20-compat] 236 | virtual Status requires() const = 0; | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/QC/TIC.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/numeric:75, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/numeric:61: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp: In member function 'void OpenMS::ConfidenceScoring::chooseDecoys_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp:50:21: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator >; _Generator = boost::random::variate_generator&, boost::uniform_int<> >&]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 50 | random_shuffle(decoy_index_.begin(), decoy_index_.end(), rand_gen_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /usr/include/boost/multi_index_container.hpp:19, from /usr/include/boost/bimap/detail/bimap_core.hpp:34, from /usr/include/boost/bimap/bimap.hpp:61, from /usr/include/boost/bimap.hpp:13, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h:40: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tree.h:65, from /usr/include/c++/13/map:62, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/stl_tree.h:63: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp:327:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 327 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:64:23: note: by 'OpenMS::DiaPrescore::operator=' 64 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DIAScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /usr/include/boost/math/special_functions/math_fwd.hpp:26, from /usr/include/boost/math/special_functions/fpclassify.hpp:18, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/bits/specfun.h:43, from /usr/include/c++/13/cmath:3699, from /usr/include/boost/math/special_functions/fpclassify.hpp:16: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h:150:29: note: by 'OpenMS::FeatureFinderAlgorithm& OpenMS::FeatureFinderAlgorithm::operator=(const OpenMS::FeatureFinderAlgorithm&)' 150 | FeatureFinderAlgorithm& operator=(const FeatureFinderAlgorithm&); | ^~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:64:23: note: by 'OpenMS::DiaPrescore::operator=' 64 | class OPENMS_DLLAPI DiaPrescore : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp:48: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h:87:35: note: by 'OpenMS::TheoreticalSpectrumGenerator& OpenMS::TheoreticalSpectrumGenerator::operator=(const OpenMS::TheoreticalSpectrumGenerator&)' 87 | TheoreticalSpectrumGenerator& operator=(const TheoreticalSpectrumGenerator& tsg); | ^~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 92%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h:53:23: note: by 'OpenMS::MasstraceCorrelator& OpenMS::MasstraceCorrelator::operator=(const OpenMS::MasstraceCorrelator&)' 53 | class OPENMS_DLLAPI MasstraceCorrelator : | ^~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMAssay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/boost/lexical_cast.hpp:26, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/special_functions/gamma.hpp:24, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h:88:23: note: by 'OpenMS::MRMDecoy::operator=' 88 | class OPENMS_DLLAPI MRMDecoy : | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp: In member function 'void OpenMS::MRMDecoy::generateDecoys(const OpenMS::TargetedExperiment&, OpenMS::TargetedExperiment&, const OpenMS::String&, double, bool, const OpenMS::String&, int, double, double, double, double, const std::vector&, const std::vector&, bool, bool, int) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp:401:26: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 401 | std::random_shuffle(item_list.begin(), item_list.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:44: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:46: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h:62:23: note: by 'OpenMS::MRMFeatureFilter& OpenMS::MRMFeatureFilter::operator=(const OpenMS::MRMFeatureFilter&)' 62 | class OPENMS_DLLAPI MRMFeatureFilter : | ^~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMap(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::TargetedExperiment&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:208:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 208 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:208:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: In member function 'void OpenMS::MRMFeatureFilter::FilterFeatureMapPercRSD(OpenMS::FeatureMap&, const OpenMS::MRMFeatureQC&, const OpenMS::MRMFeatureQC&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:402:70: warning: loop variable 'kv' of type 'const std::pair >&' binds to a temporary constructed from type 'const std::pair >' [-Wrange-loop-construct] 402 | for (const std::pair>& kv : filter_criteria.component_group_qcs.at(cg_qc_it).meta_value_qc) | ^~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp:402:70: note: use non-reference type 'const std::pair >' to make the copy explicit or 'const std::pair >&' to prevent copying [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In static member function 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int))': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:36: /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: In instantiation of 'static std::vector > OpenMS::Math::RANSAC::ransac(const std::vector >&, size_t, size_t, double, size_t, bool, int (*)(int)) [with TModelType = OpenMS::Math::RansacModelLinear; size_t = unsigned int]': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp:69:102: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:182:32: warning: 'void std::random_shuffle(_RAIter, _RAIter, _Generator&&) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Generator = int (*&)(int)]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 182 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end(), rng); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4620:5: note: declared here 4620 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last, | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h:184:32: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 184 | std::random_shuffle(pairs_shuffled.begin(), pairs_shuffled.end()); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:38: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:63: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h:772:31: note: by 'OpenMS::MRMTransitionGroupPicker& OpenMS::MRMTransitionGroupPicker::operator=(const OpenMS::MRMTransitionGroupPicker&)' 772 | MRMTransitionGroupPicker& operator=(const MRMTransitionGroupPicker& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h:64: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h:64:23: note: by 'OpenMS::EmgGradientDescent& OpenMS::EmgGradientDescent::operator=(const OpenMS::EmgGradientDescent&)' 64 | class OPENMS_DLLAPI EmgGradientDescent : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h:72:23: note: by 'OpenMS::PeakIntegrator& OpenMS::PeakIntegrator::operator=(const OpenMS::PeakIntegrator&)' 72 | class OPENMS_DLLAPI PeakIntegrator : | ^~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/algorithm:60, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:45: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:47: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:174:51: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h:136:20: note: by 'OpenMS::PeakPickerMRM& OpenMS::PeakPickerMRM::operator=(const OpenMS::PeakPickerMRM&)' 136 | PeakPickerMRM& operator=(const PeakPickerMRM& rhs); | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SONARScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h:46, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h:157:17: note: by 'OpenMS::DIAScoring& OpenMS::DIAScoring::operator=(const OpenMS::DIAScoring&)' 157 | DIAScoring& operator=(const DIAScoring& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h:83:19: note: by 'OpenMS::SONARScoring& OpenMS::SONARScoring::operator=(const OpenMS::SONARScoring&)' 83 | SONARScoring& operator=(const SONARScoring& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:44: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: note: by 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' 91 | virtual Fitter1D& operator=(const Fitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h:91:23: warning: 'virtual OpenMS::Fitter1D& OpenMS::Fitter1D::operator=(const OpenMS::Fitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: note: by 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' 101 | virtual LevMarqFitter1D & operator=(const LevMarqFitter1D & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h:101:31: warning: 'virtual OpenMS::LevMarqFitter1D& OpenMS::LevMarqFitter1D::operator=(const OpenMS::LevMarqFitter1D&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h:61:26: note: by 'virtual OpenMS::EmgFitter1D& OpenMS::EmgFitter1D::operator=(const OpenMS::EmgFitter1D&)' 61 | virtual EmgFitter1D& operator=(const EmgFitter1D& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: In instantiation of 'class OpenMS::BaseModel<1>': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:55:12: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: note: by 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' 83 | virtual BaseModel & operator=(const BaseModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h:83:25: warning: 'OpenMS::BaseModel& OpenMS::BaseModel::operator=(const OpenMS::BaseModel&) [with unsigned int D = 1]' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: note: by 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' 88 | virtual InterpolationModel & operator=(const InterpolationModel & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h:88:34: warning: 'virtual OpenMS::InterpolationModel& OpenMS::InterpolationModel::operator=(const OpenMS::InterpolationModel&)' was hidden [-Woverloaded-virtual=] /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h:68:24: note: by 'virtual OpenMS::EmgModel& OpenMS::EmgModel::operator=(const OpenMS::EmgModel&)' 68 | virtual EmgModel & operator=(const EmgModel & source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algobase.h:65, from /usr/include/c++/13/vector:62: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h:93:23: note: by 'OpenMS::MRMFeatureFinderScoring& OpenMS::MRMFeatureFinderScoring::operator=(const OpenMS::MRMFeatureFinderScoring&)' 93 | class OPENMS_DLLAPI MRMFeatureFinderScoring : | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h:52:23: note: by 'OpenMS::SwathMapMassCorrection& OpenMS::SwathMapMassCorrection::operator=(const OpenMS::SwathMapMassCorrection&)' 52 | class OPENMS_DLLAPI SwathMapMassCorrection : | ^~~~~~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SwathQC.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h:61:23: note: by 'OpenMS::LinearResampler& OpenMS::LinearResampler::operator=(const OpenMS::LinearResampler&)' 61 | class OPENMS_DLLAPI LinearResampler : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h:57:23: note: by 'OpenMS::LinearResamplerAlign::operator=' 57 | class OPENMS_DLLAPI LinearResamplerAlign : | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h:73:35: note: by 'OpenMS::BinnedSpectrumCompareFunctor& OpenMS::BinnedSpectrumCompareFunctor::operator=(const OpenMS::BinnedSpectrumCompareFunctor&)' 73 | BinnedSpectrumCompareFunctor& operator=(const BinnedSpectrumCompareFunctor& source); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h:73:34: note: by 'OpenMS::BinnedSpectralContrastAngle& OpenMS::BinnedSpectralContrastAngle::operator=(const OpenMS::BinnedSpectralContrastAngle&)' 73 | BinnedSpectralContrastAngle& operator=(const BinnedSpectralContrastAngle& source); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h:69:23: note: by 'OpenMS::TargetedSpectraExtractor& OpenMS::TargetedSpectraExtractor::operator=(const OpenMS::TargetedSpectraExtractor&)' 69 | class OPENMS_DLLAPI TargetedSpectraExtractor : | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h:74:23: note: by 'OpenMS::GaussFilter& OpenMS::GaussFilter::operator=(const OpenMS::GaussFilter&)' 74 | class OPENMS_DLLAPI GaussFilter : | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h:101:23: note: by 'OpenMS::SavitzkyGolayFilter& OpenMS::SavitzkyGolayFilter::operator=(const OpenMS::SavitzkyGolayFilter&)' 101 | class OPENMS_DLLAPI SavitzkyGolayFilter : | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h:73:23: note: by 'OpenMS::PeakPickerHiRes& OpenMS::PeakPickerHiRes::operator=(const OpenMS::PeakPickerHiRes&)' 73 | class OPENMS_DLLAPI PeakPickerHiRes : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:322:48: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp:322:48: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 96%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h:144:23: note: by 'OpenMS::TransitionTSVFile& OpenMS::TransitionTSVFile::operator=(const OpenMS::TransitionTSVFile&)' 144 | class OPENMS_DLLAPI TransitionTSVFile : | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h:219:23: note: by 'OpenMS::TransitionPQPFile& OpenMS::TransitionPQPFile::operator=(const OpenMS::TransitionPQPFile&)' 219 | class OPENMS_DLLAPI TransitionPQPFile : | ^~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/refwrap.h:39, from /usr/include/c++/13/vector:68, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ITransition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:37: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSSpectrum]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:156:64: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSSpectrum]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: In instantiation of 'class OpenMS::SignalToNoiseEstimator': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:81:9: required from 'class OpenMS::SignalToNoiseEstimatorMedian' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h:85:37: note: by 'OpenMS::SignalToNoiseEstimator& OpenMS::SignalToNoiseEstimator::operator=(const OpenMS::SignalToNoiseEstimator&) [with Container = OpenMS::MSChromatogram]' 85 | inline SignalToNoiseEstimator & operator=(const SignalToNoiseEstimator & source) | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: In instantiation of 'class OpenMS::SignalToNoiseEstimatorMedian': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h:221:56: required from 'class OpenMS::SignalToNoiseOpenMS' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp:157:70: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h:105:34: warning: 'virtual OpenMS::DefaultParamHandler& OpenMS::DefaultParamHandler::operator=(const OpenMS::DefaultParamHandler&)' was hidden [-Woverloaded-virtual=] 105 | virtual DefaultParamHandler& operator=(const DefaultParamHandler& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h:153:43: note: by 'OpenMS::SignalToNoiseEstimatorMedian& OpenMS::SignalToNoiseEstimatorMedian::operator=(const OpenMS::SignalToNoiseEstimatorMedian&) [with Container = OpenMS::MSChromatogram]' 153 | inline SignalToNoiseEstimatorMedian & operator=(const SignalToNoiseEstimatorMedian & source) | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:38: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h:40: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:37: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h:43: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h:284:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 284 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -MF CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o.d -o CMakeFiles/OpenMS.dir/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/istream:40, from /usr/include/c++/13/fstream:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h:37: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/INIUpdater.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/INIUpdater.cpp [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ToolHandler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: In static member function 'static OpenMS::Internal::ToolDescription OpenMS::ToolHandler::getExternalTools_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:321:12: warning: implicitly-declared 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' is deprecated [-Wdeprecated-copy] 321 | return tools_external_; | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:35: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:138:24: note: because 'OpenMS::Internal::ToolDescription' has user-provided 'OpenMS::Internal::ToolDescription& OpenMS::Internal::ToolDescription::operator=(const OpenMS::Internal::ToolDescription&)' 138 | ToolDescription& operator=(const ToolDescription& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In copy constructor 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: In static member function 'static OpenMS::Internal::ToolDescription OpenMS::ToolHandler::getExternalTools_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp:321:12: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 321 | return tools_external_; | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/13/bits/stl_uninitialized.h:120:21: required from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:137:32: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/13/bits/stl_uninitialized.h:185:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/13/bits/stl_uninitialized.h:373:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/13/bits/stl_vector.h:606:31: required from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator]' /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: required from here /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_tempbuf.h:61, from /usr/include/c++/13/bits/stl_algo.h:69, from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:37: /usr/include/c++/13/bits/stl_construct.h:119:7: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 119 | ::new((void*)__p) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/TOPPBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:53: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:250:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 250 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:276:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:302:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 302 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h:328:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 328 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h:119:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 119 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:39: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h:58:19: warning: 'template struct std::iterator' is deprecated [-Wdeprecated-declarations] 58 | public std::iterator | ^~~~~~~~ In file included from /usr/include/c++/13/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/13/string:47: /usr/include/c++/13/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:191:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 191 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:217:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 217 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h:243:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 243 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:41: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:173:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 173 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:224:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 224 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:276:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 276 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:326:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 326 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:340:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 340 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:354:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 354 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:368:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 368 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:382:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 382 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:396:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 396 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:414:17: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 414 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:205:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:231:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 231 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h:257:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 257 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:64:19: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 64 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:42: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:75:47: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 75 | struct OPENMS_DLLAPI RTLess : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:54: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h:141:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 141 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:84:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 84 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h:110:12: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 110 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: In member function 'OpenMS::ParameterInformation OpenMS::TOPPBase::paramEntryToParameterInformation_(const OpenMS::Param::ParamEntry&, const OpenMS::String&, const OpenMS::String&) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:796:12: warning: implicitly-declared 'OpenMS::ParameterInformation::ParameterInformation(const OpenMS::ParameterInformation&)' is deprecated [-Wdeprecated-copy] 796 | return param; | ^~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:38: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h:99:27: note: because 'OpenMS::ParameterInformation' has user-provided 'OpenMS::ParameterInformation& OpenMS::ParameterInformation::operator=(const OpenMS::ParameterInformation&)' 99 | ParameterInformation& operator=(const ParameterInformation& rhs); | ^~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: In member function 'bool OpenMS::TOPPBase::writeCTD_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:73: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:44: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:73: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp:2249:57: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 2249 | QStringList lines = ini_file_str.toQString().split("\n", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 98%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/eol-bspline -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/IsoSpec -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/json -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -MF CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o.d -o CMakeFiles/OpenMS.dir/source/APPLICATIONS/ParameterInformation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/source/APPLICATIONS/ParameterInformation.cpp [100%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/APPLICATIONS/ConsoleUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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Consolidate compiler generated dependencies of target OpenSwathAlgo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/OpenMS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_autogen make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". 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Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/PythonInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Dependencies file "src/openms/CMakeFiles/OpenMS.dir/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Automatic MOC for target OpenMS_GUI cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisTickCalculator.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/GUIProgressLoggerImpl.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/LayerData.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/ExternalProcessMBox.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisPainter.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/AxisWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ColorSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/FilterList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/HistogramWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFile.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/InputFileList.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ListEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/LayerData.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/ExternalProcessMBox.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/OutputDirectory.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/ParamEditor.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/MultiGradient.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SpectrumWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASEdge.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResource.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASResources.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASScene.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASVertex.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPASWidget.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp" AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/PythonSelector.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonModuleRequirement.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_SwathWizardBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QB5Z5ESAYE/moc_QApplicationTOPP.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_PythonSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPASBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_INIFileEditorWindow.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ColorSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_DataFilterDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_FeatureEditDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SaveImageDialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum1DGoToDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum2DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SpectrumAlignmentDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_Spectrum3DPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFileDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_SwathTabWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASIOMappingDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_HistogramDialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASToolConfigDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/FilterList.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/FilterList.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASVertexNameDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASInputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFile.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/InputFile.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPASOutputFilesDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/InputFileList.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewOpenDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TheoreticalSpectrumGenerationDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_TOPPViewPrefDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedTabBar.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/OutputDirectory.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_FilterList.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFile.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_EnhancedWorkspace.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ListEditor.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_InputFileList.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_AxisWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_OutputDirectory.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_LayerStatisticsDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/LRTCA5NHLR/moc_TOPPViewBase.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_ParamEditor.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_HistogramWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MultiGradientSelector.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_MetaDataBrowser.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SwathLibraryStats.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DOpenGLCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/QHWPTJ6V7O/moc_ToolsDialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASInputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASEdge.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraIdentificationViewWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASMergerVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum2DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASLogWindow.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectraViewWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SwathLibraryStats.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASOutputFileListVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResources.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASScene.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum3DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASResource.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTabBar.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_Spectrum1DWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumCanvas.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASSplitterVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASTreeView.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPASToolVertex.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_SpectrumWidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionInfoVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ContactPersonVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_AcquisitionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DigestionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_BaseVisualizerGUI.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewIdentificationViewBehavior.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/OXJREYPCF5/moc_TOPPViewSpectraViewBehavior.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DocumentIdentifierVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_GradientVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_HPLCVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_DataProcessingVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ExperimentalSettingsVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_InstrumentVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonDetectorVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MassAnalyzerVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoDescriptionVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ModificationVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_IonSourceVisualizer.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp", because it doesn't exist, from "SRC:/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h" /usr/lib/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -I/usr/lib -I/usr/lib/i386-linux-gnu/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -I/build/reproducible-path/openms-2.6.0+cleaned1/debian -I/usr/include/hdf5/serial -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/libwildmagic -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --output-dep-file -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideIdentificationVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PeptideHitVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProductVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinHitVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_PrecursorVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_MetaInfoVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ScanWindowVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SampleVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_ProteinIdentificationVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SourceFileVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SpectrumSettingsVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_SoftwareVisualizer.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/2MKSNPN25C/moc_TaggingVisualizer.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Generating ui_TheoreticalSpectrumGenerationDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TheoreticalSpectrumGenerationDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.ui [ 81%] Generating qrc_resources.cpp cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/rcc --name resources --output /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/qrc_resources.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/resources.qrc [ 81%] Generating ui_DataFilterDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_DataFilterDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.ui [ 81%] Generating ui_FeatureEditDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_FeatureEditDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.ui [ 81%] Generating ui_FilterList.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_FilterList.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/FilterList.ui [ 83%] Generating ui_InputFile.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_InputFile.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.ui [ 83%] Generating ui_InputFileList.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_InputFileList.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFileList.ui [ 83%] Generating ui_LayerStatisticsDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_LayerStatisticsDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.ui [ 83%] Generating ui_OutputDirectory.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_OutputDirectory.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.ui [ 83%] Generating ui_ParamEditor.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_ParamEditor.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.ui [ 83%] Generating ui_PythonModuleRequirement.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_PythonModuleRequirement.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.ui [ 83%] Generating ui_PythonSelector.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_PythonSelector.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.ui [ 83%] Generating ui_Spectrum1DGoToDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum1DGoToDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.ui [ 83%] Generating ui_Spectrum1DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum1DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.ui [ 83%] Generating ui_Spectrum2DGoToDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum2DGoToDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.ui [ 84%] Generating ui_Spectrum2DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum2DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.ui [ 84%] Generating ui_Spectrum3DPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_Spectrum3DPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.ui [ 84%] Generating ui_SpectrumAlignmentDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SpectrumAlignmentDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.ui [ 84%] Generating ui_SwathLibraryStats.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathLibraryStats.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SwathLibraryStats.ui [ 84%] Generating ui_SwathTabWidget.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathTabWidget.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.ui [ 84%] Generating ui_SwathWizardBase.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_SwathWizardBase.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.ui [ 84%] Generating ui_TOPPASIOMappingDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASIOMappingDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.ui [ 84%] Generating ui_TOPPASInputFileDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASInputFileDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.ui [ 84%] Generating ui_TOPPASInputFilesDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASInputFilesDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.ui [ 84%] Generating ui_TOPPASOutputFilesDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASOutputFilesDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.ui [ 84%] Generating ui_TOPPASVertexNameDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPASVertexNameDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.ui [ 84%] Generating ui_TOPPViewOpenDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPViewOpenDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.ui [ 84%] Generating ui_TOPPViewPrefDialog.h cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/ui_TOPPViewPrefDialog.h /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.ui cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/OpenMS_GUI_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/mocs_compilation.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In constructor 'OpenMS::TOPPViewBase::TOPPViewBase(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:148:68: warning: 'const QRect QDesktopWidget::screenGeometry(int) const' is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 148 | QRect screen_geometry = QApplication::desktop()->screenGeometry(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:58, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:79:67: note: declared here 79 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect screenGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:86: /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:322:38: note: in expansion of macro 'CONNECTCAST' 322 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:27: /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:322:38: note: in expansion of macro 'CONNECTCAST' 322 | connect(intensity_button_group_, CONNECTCAST(QButtonGroup,buttonClicked,(int)), this, &TOPPViewBase::setIntensityMode); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:357:29: note: in expansion of macro 'CONNECTCAST' 357 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h:51:84: warning: 'void QButtonGroup::buttonClicked(int)' is deprecated: Use QButtonGroup::idClicked(int) instead [-Wdeprecated-declarations] 51 | #define CONNECTCAST(class,func,args) static_cast(&class::func) | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:357:29: note: in expansion of macro 'CONNECTCAST' 357 | connect(draw_group_1d_, CONNECTCAST(QButtonGroup, buttonClicked, (int)), this, &TOPPViewBase::setDrawMode1D); | ^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qbuttongroup.h:90:10: note: declared here 90 | void buttonClicked(int); | ^~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::runTOPPTool_()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:2457:24: warning: 'int QTime::restart()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 2457 | topp_.timer.restart(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/FilterList.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:46: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:236:54: note: declared here 236 | QT_DEPRECATED_X("Use QElapsedTimer instead") int restart(); | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: In member function 'void OpenMS::TOPPViewBase::finishTOPPToolExecution(int, QProcess::ExitStatus)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp:2493:79: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 2493 | QString("Execution time: %1 ms").arg(topp_.timer.elapsed())); | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In static member function 'static OpenMS::TOPPASTreeView* OpenMS::TOPPASBase::createTOPPToolsTreeWidget(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:482:52: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 482 | QStringList category_list = category_set.toList(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qitemselectionmodel.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemview.h:46, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreeview.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTreeWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:40: /usr/include/i386-linux-gnu/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:483:10: warning: 'void qSort(Container&) [with Container = QStringList]' is deprecated: Use std::sort [-Wdeprecated-declarations] 483 | qSort(category_list); | ~~~~~^~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:49, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qwidget.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qframe.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractscrollarea.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemview.h:44: /usr/include/i386-linux-gnu/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: In member function 'void OpenMS::TOPPASBase::openFilesInTOPPView(QStringList)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:94: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp:1559:66: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 1559 | files = files.join("#SpLiT_sTrInG#+#SpLiT_sTrInG#").split("#SpLiT_sTrInG#", QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp [ 84%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/PythonSelector.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp [ 86%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp [ 87%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ 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-fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp [ 89%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp [ 90%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp: In member function 'virtual void OpenMS::Annotation1DPeakItem::draw(OpenMS::Spectrum1DCanvas*, QPainter&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:47, from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:36: /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp: In member function 'virtual void OpenMS::Annotation1DCaret::draw(OpenMS::Spectrum1DCanvas*, QPainter&, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:161:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 161 | itype = line.intersect(top, ip); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:47, from /usr/include/i386-linux-gnu/qt5/QtGui/qtransform.h:43, from /usr/include/i386-linux-gnu/qt5/QtGui/qstatictext.h:48, from /usr/include/i386-linux-gnu/qt5/QtGui/QStaticText:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:169:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 169 | itype = line.intersect(left, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:178:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 178 | itype = line.intersect(right, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp:187:29: warning: 'QLineF::IntersectType QLineF::intersect(const QLineF&, QPointF*) const' is deprecated: Use intersects() instead [-Wdeprecated-declarations] 187 | itype = line.intersect(bottom, ip); | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qline.h:256:19: note: declared here 256 | IntersectType intersect(const QLineF &l, QPointF *intersectionPoint) const; | ^~~~~~~~~ [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisPainter.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/AxisWidget.cpp [ 92%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include 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/usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/FilterList.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/HistogramWidget.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp: In constructor 'OpenMS::InputFile::InputFile(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp:57:48: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 57 | completer->setModel(new QDirModel(completer)); | ^ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFile.cpp:44: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/InputFileList.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp: In member function 'void OpenMS::LayerData::updatePeptideHitAnnotations_(OpenMS::PeptideHit&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:71: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp:195:42: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 195 | QStringList lines = peak_anno.split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp: In member function 'void OpenMS::Internal::ListTable::createNewRow()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp:332:22: warning: 'void QListWidget::setItemSelected(const QListWidgetItem*, bool)' is deprecated: Use QListWidgetItem::setSelected() instead [-Wdeprecated-declarations] 332 | setItemSelected(item, true); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QListWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h:45, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qlistwidget.h:263:10: note: declared here 263 | void setItemSelected(const QListWidgetItem *item, bool select); | ^~~~~~~~~~~~~~~ [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradient.cpp [ 93%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp: In constructor 'OpenMS::OutputDirectory::OutputDirectory(QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp:56:51: warning: 'QDirModel::QDirModel(QObject*)' is deprecated: Use QFileSystemModel [-Wdeprecated-declarations] 56 | QDirModel* dir_model = new QDirModel(completer); | ^ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QDirModel:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/OutputDirectory.cpp:45: /usr/include/i386-linux-gnu/qt5/QtWidgets/qdirmodel.h:73:67: note: declared here 73 | QT_DEPRECATED_VERSION_X_5_15("Use QFileSystemModel") explicit QDirModel(QObject *parent = nullptr); | ^~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'bool OpenMS::Internal::ParamEditorDelegate::exists_(QString, QModelIndex) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:369:34: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 369 | while (index.parent().child(current_index, 0).isValid()) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/qstyleoption.h:66, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qabstractitemdelegate.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qitemdelegate.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QItemDelegate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:374:31: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 374 | index.parent().child(current_index, 0).data(Qt::DisplayRole).toString() == name | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:377:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 377 | (index.data(Qt::UserRole).toInt() == 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() == 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:379:75: warning: 'QModelIndex QModelIndex::child(int, int) const' is deprecated: Use QAbstractItemModel::index [-Wdeprecated-declarations] 379 | (index.data(Qt::UserRole).toInt() != 0 && index.parent().child(current_index, 0).data(Qt::UserRole).toInt() != 0) | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qabstractitemmodel.h:455:20: note: declared here 455 | inline QModelIndex QModelIndex::child(int arow, int acolumn) const | ^~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function 'void OpenMS::ParamEditor::load(OpenMS::Param&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:503:29: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 503 | item->setTextColor(0, Qt::darkGray); // color of nodes with children | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTreeWidget:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h:44: /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:535:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 535 | item->setTextColor(0, QColor(255, 140, 0, 255)); // orange | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:536:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 536 | item->setTextColor(2, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:537:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 537 | item->setTextColor(3, QColor(255, 140, 0, 255)); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:541:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 541 | item->setTextColor(0, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:542:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 542 | item->setTextColor(2, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp:543:27: warning: 'void QTreeWidgetItem::setTextColor(int, const QColor&)' is deprecated: Use QTreeWidgetItem::setForeground() instead [-Wdeprecated-declarations] 543 | item->setTextColor(3, Qt::darkGray); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtreewidget.h:156:17: note: declared here 156 | inline void setTextColor(int column, const QColor &color) | ^~~~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::updateEntries()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:543:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 543 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:272, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:544:29: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 544 | item->setTextColor(Qt::blue); // draw precursor information in blue | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:565:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 565 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:571:35: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 571 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:670:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 670 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:671:33: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 671 | item->setTextColor(Qt::blue); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:701:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 701 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:702:33: warning: 'void QTableWidgetItem::setTextColor(const QColor&)' is deprecated: Use QTableWidgetItem::setForeground() instead [-Wdeprecated-declarations] 702 | item->setTextColor(Qt::blue); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:156:17: note: declared here 156 | inline void setTextColor(const QColor &color) | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:722:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 722 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:728:39: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 728 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:755:41: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 755 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addTextItemToBottomRow_(const QString&, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:974:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 974 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addIntItemToBottomRow_(OpenMS::Int, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:982:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 982 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addDoubleItemToBottomRow_(double, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:990:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 990 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: In member function 'void OpenMS::SpectraIdentificationViewWidget::addCheckboxItemToBottomRow_(bool, OpenMS::Size, const QColor&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp:1005:29: warning: 'void QTableWidgetItem::setBackgroundColor(const QColor&)' is deprecated: Use QTableWidgetItem::setBackground() instead [-Wdeprecated-declarations] 1005 | item->setBackgroundColor(c); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/i386-linux-gnu/qt5/QtWidgets/qtablewidget.h:142:17: note: declared here 142 | inline void setBackgroundColor(const QColor &color) | ^~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp: In member function 'void OpenMS::SpectraViewWidget::updateEntries(const OpenMS::LayerData&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:767:21: warning: 'constexpr QFlags::QFlags(Zero) [with Enum = Qt::ItemFlag; Zero = int QFlags::Private::*]' is deprecated: Use default constructor instead [-Wdeprecated-declarations] 767 | item->setFlags(nullptr); | ~~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qglobal.h:1305, from /usr/include/i386-linux-gnu/qt5/QtCore/QtCore:4, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:3, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:3, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qflags.h:123:80: note: declared here 123 | QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} | ^~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp:773:21: warning: 'constexpr QFlags::QFlags(Zero) [with Enum = Qt::ItemFlag; Zero = int QFlags::Private::*]' is deprecated: Use default constructor instead [-Wdeprecated-declarations] 773 | item->setFlags(nullptr); | ~~~~~~~~~~~~~~^~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qflags.h:123:80: note: declared here 123 | QT_DEPRECATED_X("Use default constructor instead") Q_DECL_CONSTEXPR inline QFlags(Zero) noexcept : i(0) {} | ^~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp: In member function 'void OpenMS::Spectrum1DCanvas::paint(QPainter*, QPaintEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:700:36: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 700 | if (show_timing_) { timer.start(); } | ~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QTime:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:40: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp:934:51: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 934 | cout << "paint event took " << timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp: In member function 'virtual void OpenMS::Spectrum1DWidget::saveAsImage()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp:369:43: warning: 'static QPixmap QPixmap::grabWidget(QObject*, int, int, int, int)' is deprecated: Use QWidget::grab() instead [-Wdeprecated-declarations] 369 | QPixmap pixmap = QPixmap::grabWidget(this); | ~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:122:20: note: declared here 122 | static QPixmap grabWidget(QObject *widget, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp: In member function 'virtual void OpenMS::Spectrum2DCanvas::paintEvent(QPaintEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1540:26: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1540 | overall_timer.start(); | ~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:36: /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1568:28: warning: 'void QTime::start()' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1568 | layer_timer.start(); | ~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:235:55: note: declared here 235 | QT_DEPRECATED_X("Use QElapsedTimer instead") void start(); | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1612:71: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1612 | cout << " -layer " << i << " time: " << layer_timer.elapsed() << " ms" << endl; | ~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1622:45: warning: 'QVector QRegion::rects() const' is deprecated: Use begin()/end() instead [-Wdeprecated-declarations] 1622 | QVector rects = e->region().rects(); | ~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qmatrix.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47: /usr/include/i386-linux-gnu/qt5/QtGui/qregion.h:125:20: note: declared here 125 | QVector rects() const; | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp:1720:59: warning: 'int QTime::elapsed() const' is deprecated: Use QElapsedTimer instead [-Wdeprecated-declarations] 1720 | cout << " -overall time: " << overall_timer.elapsed() << " ms" << endl << endl; | ~~~~~~~~~~~~~~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:237:54: note: declared here 237 | QT_DEPRECATED_X("Use QElapsedTimer instead") int elapsed() const; | ^~~~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: In member function 'virtual void OpenMS::SpectrumCanvas::wheelEvent(QWheelEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:15: warning: 'int QWheelEvent::x() const' is deprecated: Use position() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qtextlayout.h:49, from /usr/include/i386-linux-gnu/qt5/QtGui/qabstracttextdocumentlayout.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QtGui:5, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgetsDepends:4, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QtWidgets:3, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:48, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:229:16: note: declared here 229 | inline int x() const { return int(p.x()); } | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:23: warning: 'int QWheelEvent::y() const' is deprecated: Use position() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~^~ /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:231:16: note: declared here 231 | inline int y() const { return int(p.y()); } | ^ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:202:35: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 202 | zoom_(e->x(), e->y(), e->delta() > 0); | ~~~~~~~~^~ /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: In member function 'void OpenMS::SpectrumCanvas::drawText_(QPainter&, QStringList)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp:1025:43: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 1025 | width = max(width, 4 + metrics.width(text[i])); | ~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QtGui:26: /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ [ 95%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp: In member function 'virtual void OpenMS::SpectrumWidget::saveAsImage()': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp:232:41: warning: 'static QPixmap QPixmap::grabWidget(QObject*, int, int, int, int)' is deprecated: Use QWidget::grab() instead [-Wdeprecated-declarations] 232 | QPixmap pixmap = QPixmap::grabWidget(this); | ~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qbrush.h:52, from /usr/include/i386-linux-gnu/qt5/QtGui/qpen.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/QPen:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h:47, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp:35: /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:122:20: note: declared here 122 | static QPixmap grabWidget(QObject *widget, int x = 0, int y = 0, int w = -1, int h = -1); | ^~~~~~~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/SwathLibraryStats.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp: In member function 'virtual void OpenMS::TOPPASEdge::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:215:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 215 | int text_width=fm.width(str); | ~~~~~~~~^~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/qpainter.h:59, from /usr/include/i386-linux-gnu/qt5/QtGui/QPainter:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:36: /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp:235:32: warning: 'int QFontMetrics::width(const QString&, int) const' is deprecated: Use QFontMetrics::horizontalAdvance [-Wdeprecated-declarations] 235 | int text_width = fm.width(str); | ~~~~~~~~^~~~~ /usr/include/i386-linux-gnu/qt5/QtGui/qfontmetrics.h:106:9: note: declared here 106 | int width(const QString &, int len = -1) const; | ^~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResource.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResources.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp: In member function 'virtual void OpenMS::TOPPASScene::contextMenuEvent(QGraphicsSceneContextMenuEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp:1833:70: warning: 'QList QSet::toList() const [with T = QString]' is deprecated: Use values() instead. [-Wdeprecated-declarations] 1833 | QList supported_actions = supported_actions_set.toList(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtWidgets/qgraphicssceneevent.h:49, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QGraphicsSceneMouseEvent:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:79, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qset.h:265:14: note: declared here 265 | QList toList() const { return values(); } | ^~~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'void OpenMS::TOPPASToolVertex::getParameters_(QVector&, bool) const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:326:10: warning: 'void qSort(Container&) [with Container = QVector]' is deprecated: Use std::sort [-Wdeprecated-declarations] 326 | qSort(io_infos); | ~~~~~^~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:43, from /usr/include/i386-linux-gnu/qt5/QtCore/qstringlist.h:41, from /usr/include/i386-linux-gnu/qt5/QtGui/qcolor.h:46, from /usr/include/i386-linux-gnu/qt5/QtGui/qpixmap.h:45, from /usr/include/i386-linux-gnu/qt5/QtGui/qpainter.h:48, from /usr/include/i386-linux-gnu/qt5/QtGui/QPainter:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:77, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qalgorithms.h:188:46: note: declared here 188 | QT_DEPRECATED_X("Use std::sort") inline void qSort(Container &c) | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: In member function 'QString OpenMS::TOPPASToolVertex::toolnameWithWhitespacesForFancyWordWrapping_(QPainter*, const QString&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qhashfunctions.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/qlist.h:47: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:61: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp:394:34: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 394 | QStringList parts = str.split(QRegExp("\\s+"), QString::SkipEmptyParts); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 96%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'void OpenMS::TOPPASVertex::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*, bool)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:209:39: warning: 'void QPainterPath::addRoundRect(const QRectF&, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 209 | if (round_shape) path.addRoundRect(boundingRect().marginsRemoved(QMarginsF(1, 1, 1, 1)), 20); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QPainterPath:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h:78, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:35: /usr/include/i386-linux-gnu/qt5/QtGui/qpainterpath.h:152:10: note: declared here 152 | void addRoundRect(const QRectF &rect, int roundness); | ^~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: In member function 'virtual QPainterPath OpenMS::TOPPASVertex::shape() const': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp:230:23: warning: 'void QPainterPath::addRoundRect(const QRectF&, int, int)' is deprecated: Use addRoundedRect(..., Qt::RelativeSize) instead [-Wdeprecated-declarations] 230 | shape.addRoundRect(boundingRect(), 20, 20); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtGui/qpainterpath.h:147:10: note: declared here 147 | void addRoundRect(const QRectF &rect, int xRnd, int yRnd); | ^~~~~~~~~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp: In member function 'virtual void OpenMS::TOPPASWidget::wheelEvent(QWheelEvent*)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:101:22: warning: 'int QWheelEvent::delta() const' is deprecated: Use angleDelta() [-Wdeprecated-declarations] 101 | zoom(event->delta() < 0); | ~~~~~~~~~~~~^~ In file included from /usr/include/i386-linux-gnu/qt5/QtGui/QDragEnterEvent:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp:44: /usr/include/i386-linux-gnu/qt5/QtGui/qevent.h:219:16: note: declared here 219 | inline int delta() const { return qt4D; } | ^~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp: In member function 'void OpenMS::TOPPViewIdentificationViewBehavior::addPeakAnnotationsFromID_(const OpenMS::PeptideHit&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qobject.h:47, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qwidget.h:45, from /usr/include/i386-linux-gnu/qt5/QtWidgets/qtabbar.h:44, from /usr/include/i386-linux-gnu/qt5/QtWidgets/QTabBar:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:38: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:79: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp:1178:50: warning: 'QStringList QString::split(const QRegExp&, SplitBehavior) const' is deprecated: Use split(const QRegularExpression &, Qt::SplitBehavior) variant instead [-Wdeprecated-declarations] 1178 | QStringList lines = label.toQString().split(QRegExp("[\r\n]"), QString::SkipEmptyParts); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:622:17: note: declared here 622 | QStringList split(const QRegExp &sep, SplitBehavior behavior) const; | ^~~~~ [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_GUI_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/OpenMS_GUI_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -MF CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d -o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/qrc_resources.cpp [ 98%] Linking CXX shared library ../../lib/i386-linux-gnu/libOpenMS_GUI.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMS_GUI.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libOpenMS_GUI.so.2.6.0 -o ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS_GUI.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenMS_GUI make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target TOPPView cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView_autogen make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPView_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPView_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -MF CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d -o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp [ 98%] Linking CXX executable ../../bin/TOPPView cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPView.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o -o ../../bin/TOPPView ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPView make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target INIFileEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor_autogen make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/INIFileEditor_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/INIFileEditor_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -MF CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d -o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp [ 98%] Linking CXX executable ../../bin/INIFileEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIFileEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o -o ../../bin/INIFileEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target INIFileEditor make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target SwathWizard cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard_autogen make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/SwathWizard_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/mocs_compilation.cpp [ 98%] Building CXX object src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/SwathWizard_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -MF CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d -o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp [ 98%] Linking CXX executable ../../bin/SwathWizard cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/SwathWizard.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o -o ../../bin/SwathWizard ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SwathWizard make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPAS_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Automatic MOC for target TOPPAS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenInfo.json release AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E touch /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/timestamp make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOPPAS_autogen make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPAS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/mocs_compilation.cpp [100%] Building CXX object src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/TOPPAS_autogen/include -I/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -MF CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d -o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp [100%] Linking CXX executable ../../bin/TOPPAS cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOPPAS.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o -o ../../bin/TOPPAS ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPPAS make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/GUI.dir/build.make src/openms_gui/CMakeFiles/GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target GUI make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f CMakeFiles/Makefile2 TOPP make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 81 make -f CMakeFiles/Makefile2 src/topp/CMakeFiles/TOPP.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/OpenMS_GUI_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI_autogen make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 65%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/qrc_resources.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPASBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisPainter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisTickCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/AxisWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ColorSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/DataFilterDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/FeatureEditDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/HistogramDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonModuleRequirement.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/PythonSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SaveImageDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/SwathTabWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/DIALOGS/ToolsDialog.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBar.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedTabBarWidgetInterface.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/EnhancedWorkspace.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/FilterList.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/GUIProgressLoggerImpl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/HistogramWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/InputFileList.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/LayerData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ListEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/ExternalProcessMBox.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MISC/GUIHelpers.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MetaDataBrowser.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradient.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/MultiGradientSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/OutputDirectory.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/ParamEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraIdentificationViewWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectraViewWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum1DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum2DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DOpenGLCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/Spectrum3DWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumCanvas.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SpectrumWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/SwathLibraryStats.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASEdge.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASInputFileListVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASLogWindow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASMergerVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASOutputFileListVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResource.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASResources.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASScene.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASSplitterVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTabBar.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASToolVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASTreeView.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASVertex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPASWidget.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/TOPPViewSpectraViewBehavior.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/GradientVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProductVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SampleVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/OpenMS_GUI.dir/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMS_GUI make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target OpenMS_GUI make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp 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-isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o -MF CMakeFiles/Resampler.dir/Resampler.cpp.o.d -o CMakeFiles/Resampler.dir/Resampler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp [ 79%] Linking CXX executable ../../bin/Resampler cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Resampler.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Resampler.dir/Resampler.cpp.o -o ../../bin/Resampler ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so 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/usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target Resampler make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu 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/usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Building CXX object src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -MF CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d -o CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp [ 80%] Linking CXX executable ../../bin/CometAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CometAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o -o ../../bin/CometAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o -MF CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d -o CMakeFiles/CompNovo.dir/CompNovo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp [ 80%] Linking CXX executable ../../bin/CompNovo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovo.dir/CompNovo.cpp.o -o ../../bin/CompNovo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -MF CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d -o CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp [ 80%] Linking CXX executable ../../bin/CompNovoCID cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompNovoCID.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o -o ../../bin/CompNovoCID ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -MF CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d -o CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp [ 80%] Linking CXX executable ../../bin/ConsensusID cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusID.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o -o ../../bin/ConsensusID ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -MF CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d -o CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp [ 80%] Linking CXX executable ../../bin/ConsensusMapNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConsensusMapNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o -o ../../bin/ConsensusMapNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -MF CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d -o CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp [ 80%] Linking CXX executable ../../bin/CruxAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/CruxAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o -o ../../bin/CruxAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -MF CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d -o CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp [ 80%] Linking CXX executable ../../bin/DatabaseSuitability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseSuitability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o -o ../../bin/DatabaseSuitability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o -MF CMakeFiles/Decharger.dir/Decharger.cpp.o.d -o CMakeFiles/Decharger.dir/Decharger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp [ 80%] Linking CXX executable ../../bin/Decharger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/Decharger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/Decharger.dir/Decharger.cpp.o -o ../../bin/Decharger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -MF CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d -o CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp [ 80%] Linking CXX executable ../../bin/DTAExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTAExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o -o ../../bin/DTAExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -MF CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d -o CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp [ 80%] Linking CXX executable ../../bin/EICExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/EICExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o -o ../../bin/EICExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -MF CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d -o CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp [ 80%] Linking CXX executable ../../bin/ExternalCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExternalCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o -o ../../bin/ExternalCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -MF CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d -o CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp [ 80%] Linking CXX executable ../../bin/FalseDiscoveryRate cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FalseDiscoveryRate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o -o ../../bin/FalseDiscoveryRate ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -MF CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d -o CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderCentroided cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderCentroided.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o -o ../../bin/FeatureFinderCentroided ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -MF CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d -o CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderIdentification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIdentification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o -o ../../bin/FeatureFinderIdentification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -MF CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d -o CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderIsotopeWavelet cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderIsotopeWavelet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o -o ../../bin/FeatureFinderIsotopeWavelet ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -MF CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d -o CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMetabo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetabo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o -o ../../bin/FeatureFinderMetabo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -MF CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d -o CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMRM cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMRM.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o -o ../../bin/FeatureFinderMRM ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -MF CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d -o CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp [ 80%] Linking CXX executable ../../bin/FeatureFinderMultiplex cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMultiplex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o -o ../../bin/FeatureFinderMultiplex ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -MF CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d -o CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerLabeled cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerLabeled.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o -o ../../bin/FeatureLinkerLabeled ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerUnlabeled cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeled.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o -o ../../bin/FeatureLinkerUnlabeled ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp [ 80%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledKD cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledKD.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o -o ../../bin/FeatureLinkerUnlabeledKD ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Building CXX object src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -MF CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d -o CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp [ 81%] Linking CXX executable ../../bin/FeatureLinkerUnlabeledQT cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureLinkerUnlabeledQT.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o -o ../../bin/FeatureLinkerUnlabeledQT ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Building CXX object src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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-fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o -MF CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d -o CMakeFiles/FileConverter.dir/FileConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp [ 81%] Linking CXX executable ../../bin/FileConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileConverter.dir/FileConverter.cpp.o -o ../../bin/FileConverter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d -o CMakeFiles/FileFilter.dir/FileFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp [ 81%] Linking CXX executable ../../bin/FileFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileFilter.dir/FileFilter.cpp.o -o ../../bin/FileFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o -MF CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d -o CMakeFiles/FileMerger.dir/FileMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp [ 81%] Linking CXX executable ../../bin/FileMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/FileMerger.dir/FileMerger.cpp.o -o ../../bin/FileMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -MF CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d -o CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:212:10: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 212 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPGenericWrapper::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:497:18: warning: 'void QProcess::start(const QString&, QIODevice::OpenMode)' is deprecated: Use QProcess::start(const QString &program, const QStringList &arguments,OpenMode mode = ReadWrite) instead [-Wdeprecated-declarations] 497 | builder.start(call.toQString()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QProcess:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp:48: /usr/include/i386-linux-gnu/qt5/QtCore/qprocess.h:168:10: note: declared here 168 | void start(const QString &command, OpenMode mode = ReadWrite); | ^~~~~ [ 81%] Linking CXX executable ../../bin/GenericWrapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericWrapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o -o ../../bin/GenericWrapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -MF CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d -o CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp [ 82%] Linking CXX executable ../../bin/GNPSExport cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/GNPSExport.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o -o ../../bin/GNPSExport ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -MF CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d -o CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp [ 82%] Linking CXX executable ../../bin/HighResPrecursorMassCorrector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/HighResPrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o -o ../../bin/HighResPrecursorMassCorrector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -MF CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d -o CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp [ 82%] Linking CXX executable ../../bin/IDConflictResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDConflictResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o -o ../../bin/IDConflictResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Building CXX object src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make 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/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o -MF CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d -o CMakeFiles/IDMapper.dir/IDMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp [ 83%] Linking CXX executable ../../bin/IDMapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDMapper.dir/IDMapper.cpp.o -o ../../bin/IDMapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o -MF CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d -o CMakeFiles/IDMerger.dir/IDMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp [ 83%] Linking CXX executable ../../bin/IDMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDMerger.dir/IDMerger.cpp.o -o ../../bin/IDMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -MF CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d -o CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp [ 83%] Linking CXX executable ../../bin/IDPosteriorErrorProbability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDPosteriorErrorProbability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o -o ../../bin/IDPosteriorErrorProbability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Building CXX object src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o -MF CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d -o CMakeFiles/IDRipper.dir/IDRipper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp [ 85%] Linking CXX executable ../../bin/IDRipper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRipper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDRipper.dir/IDRipper.cpp.o -o ../../bin/IDRipper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -MF CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d -o CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp [ 85%] Linking CXX executable ../../bin/IDRTCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDRTCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o -o ../../bin/IDRTCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -MF CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d -o CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp [ 85%] Linking CXX executable ../../bin/InclusionExclusionListCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InclusionExclusionListCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o -o ../../bin/InclusionExclusionListCreator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -MF CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o.d -o CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPInspectAdapter::main_(OpenMS::Int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/qdatetime.h:44, from /usr/include/i386-linux-gnu/qt5/QtCore/QDate:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:35: /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:758:117: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 758 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:132: warning: 'QString::SkipEmptyParts' is deprecated [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ^~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:605:9: note: declared here 605 | SkipEmptyParts Q_DECL_ENUMERATOR_DEPRECATED | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp:807:117: warning: 'QStringList QString::split(const QString&, SplitBehavior, Qt::CaseSensitivity) const' is deprecated: Use split(const QString &sep, Qt::SplitBehavior ...) variant instead [-Wdeprecated-declarations] 807 | Int status = QProcess::execute((inspect_directory + "inspect").toQString(), QStringList(call.toQString().split(" ", QString::SkipEmptyParts))); // does automatic escaping etc... | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/qt5/QtCore/qstring.h:609:17: note: declared here 609 | QStringList split(const QString &sep, SplitBehavior behavior, | ^~~~~ [ 85%] Linking CXX executable ../../bin/InspectAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InspectAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o -o ../../bin/InspectAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -MF CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d -o CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp [ 85%] Linking CXX executable ../../bin/InternalCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/InternalCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o -o ../../bin/InternalCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -MF CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d -o CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp [ 85%] Linking CXX executable ../../bin/IsobaricAnalyzer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsobaricAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o -o ../../bin/IsobaricAnalyzer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -MF CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d -o CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp [ 85%] Linking CXX executable ../../bin/LuciphorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/LuciphorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o -o ../../bin/LuciphorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -MF CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d -o CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerIdentification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerIdentification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o -o ../../bin/MapAlignerIdentification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -MF CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d -o CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerPoseClustering cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerPoseClustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o -o ../../bin/MapAlignerPoseClustering ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -MF CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d -o CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerSpectrum cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerSpectrum.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o -o ../../bin/MapAlignerSpectrum ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -MF CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d -o CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp [ 85%] Linking CXX executable ../../bin/MapAlignerTreeGuided cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapAlignerTreeGuided.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o -o ../../bin/MapAlignerTreeGuided ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -MF CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d -o CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp [ 85%] Linking CXX executable ../../bin/MapNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o -o ../../bin/MapNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -MF CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d -o CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp [ 86%] Linking CXX executable ../../bin/MapRTTransformer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapRTTransformer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o -o ../../bin/MapRTTransformer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -MF CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d -o CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp [ 86%] Linking CXX executable ../../bin/MapStatistics cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MapStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o -o ../../bin/MapStatistics ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -MF CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d -o CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp [ 86%] Linking CXX executable ../../bin/MaRaClusterAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaRaClusterAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o -o ../../bin/MaRaClusterAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -MF CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d -o CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPMascotAdapter::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp:576:28: warning: 'static int QProcess::execute(const QString&)' is deprecated: Use QProcess::execute(const QString &program, const QStringList &arguments) instead [-Wdeprecated-declarations] 576 | status = qp.execute(call.toQString()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/qt5/QtCore/QProcess:1, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp:53: /usr/include/i386-linux-gnu/qt5/QtCore/qprocess.h:265:16: note: declared here 265 | static int execute(const QString &command); | ^~~~~~~ [ 86%] Linking CXX executable ../../bin/MascotAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o -o ../../bin/MascotAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -MF CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d -o CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp [ 86%] Linking CXX executable ../../bin/MascotAdapterOnline cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MascotAdapterOnline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o -o ../../bin/MascotAdapterOnline ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -MF CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d -o CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp [ 86%] Linking CXX executable ../../bin/MassTraceExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassTraceExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o -o ../../bin/MassTraceExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -MF CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d -o CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp [ 87%] Linking CXX executable ../../bin/MRMMapper cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMMapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o -o ../../bin/MRMMapper ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -MF CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d -o CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp [ 87%] Linking CXX executable ../../bin/MSGFPlusAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSGFPlusAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o -o ../../bin/MSGFPlusAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -MF CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d -o CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp [ 87%] Linking CXX executable ../../bin/MyriMatchAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyriMatchAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o -o ../../bin/MyriMatchAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -MF CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d -o CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp [ 87%] Linking CXX executable ../../bin/MzTabExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzTabExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o -o ../../bin/MzTabExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Building CXX object src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -MF CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d -o CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp [ 88%] Linking CXX executable ../../bin/NoiseFilterGaussian cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterGaussian.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o -o ../../bin/NoiseFilterGaussian ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -MF CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d -o CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp [ 88%] Linking CXX executable ../../bin/NoiseFilterSGolay cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/NoiseFilterSGolay.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o -o ../../bin/NoiseFilterSGolay ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -MF CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d -o CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp [ 88%] Linking CXX executable ../../bin/OMSSAAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OMSSAAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o -o ../../bin/OMSSAAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -MF CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d -o CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp [ 88%] Linking CXX executable ../../bin/OpenPepXL cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXL.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o -o ../../bin/OpenPepXL ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -MF CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d -o CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp [ 88%] Linking CXX executable ../../bin/OpenPepXLLF cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenPepXLLF.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o -o ../../bin/OpenPepXLLF ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -MF CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d -o CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp [ 88%] Linking CXX executable ../../bin/OpenSwathAnalyzer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAnalyzer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o -o ../../bin/OpenSwathAnalyzer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -MF CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d -o CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp In file included from /usr/include/boost/lexical_cast.hpp:26, from /usr/include/boost/math/tools/convert_from_string.hpp:17, from /usr/include/boost/math/constants/constants.hpp:14, from /usr/include/boost/math/special_functions/gamma.hpp:24, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 88%] Linking CXX executable ../../bin/OpenSwathAssayGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAssayGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o -o ../../bin/OpenSwathAssayGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -MF CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d -o CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathChromatogramExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathChromatogramExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o -o ../../bin/OpenSwathChromatogramExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -MF CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d -o CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathConfidenceScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathConfidenceScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o -o ../../bin/OpenSwathConfidenceScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -MF CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d -o CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathDecoyGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDecoyGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o -o ../../bin/OpenSwathDecoyGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -MF CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d -o CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp [ 90%] Linking CXX executable ../../bin/OpenSwathFeatureXMLToTSV cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFeatureXMLToTSV.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o -o ../../bin/OpenSwathFeatureXMLToTSV ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Building CXX object src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -MF CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d -o CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp [ 91%] Linking CXX executable ../../bin/OpenSwathRTNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRTNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o -o ../../bin/OpenSwathRTNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Building CXX object src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -MF CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d -o CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp [ 92%] Linking CXX executable ../../bin/PeakPickerHiRes cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerHiRes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o -o ../../bin/PeakPickerHiRes ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -MF CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d -o CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp [ 92%] Linking CXX executable ../../bin/PeakPickerWavelet cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerWavelet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o -o ../../bin/PeakPickerWavelet ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -MF CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d -o CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp [ 92%] Linking CXX executable ../../bin/PepNovoAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PepNovoAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o -o ../../bin/PepNovoAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -MF CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d -o CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp:37: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp:35: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 92%] Linking CXX executable ../../bin/PeptideIndexer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeptideIndexer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o -o ../../bin/PeptideIndexer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -MF CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d -o CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp [ 92%] Linking CXX executable ../../bin/PercolatorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PercolatorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o -o ../../bin/PercolatorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -MF CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d -o CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp [ 92%] Linking CXX executable ../../bin/PhosphoScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PhosphoScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o -o ../../bin/PhosphoScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -MF CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d -o CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp [ 93%] Linking CXX executable ../../bin/PrecursorIonSelector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorIonSelector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o -o ../../bin/PrecursorIonSelector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -MF CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d -o CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp [ 93%] Linking CXX executable ../../bin/PrecursorMassCorrector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PrecursorMassCorrector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o -o ../../bin/PrecursorMassCorrector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -MF CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d -o CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp [ 93%] Linking CXX executable ../../bin/ProteinInference cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinInference.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o -o ../../bin/ProteinInference ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -MF CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d -o CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp: In member function 'void TOPPProteinQuantifier::writeProteinTable_(OpenMS::SVOutStream&, const ProteinQuant&, const OpenMS::ExperimentalDesign&)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp:566:47: warning: variable 'file_it' set but not used [-Wunused-but-set-variable] 566 | ConsensusMap::ColumnHeaders::iterator file_it = columns_headers_.begin(); | ^~~~~~~ [ 93%] Linking CXX executable ../../bin/ProteinQuantifier cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinQuantifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o -o ../../bin/ProteinQuantifier ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -MF CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d -o CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp [ 93%] Linking CXX executable ../../bin/ProteinResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteinResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o -o ../../bin/ProteinResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o -MF CMakeFiles/PTModel.dir/PTModel.cpp.o.d -o CMakeFiles/PTModel.dir/PTModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPPTModel::main_(OpenMS::Int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:456:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 456 | random_shuffle(training_peptides.begin(), training_peptides.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/algorithm:61, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp:503:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 503 | random_shuffle(temp_training_peptides.begin(), temp_training_peptides.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../../bin/PTModel cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/PTModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PTModel.dir/PTModel.cpp.o -o ../../bin/PTModel ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/PTPredict.dir/PTPredict.cpp.o -o ../../bin/PTPredict ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o -MF CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d -o CMakeFiles/QualityControl.dir/QualityControl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp [ 95%] Linking CXX executable ../../bin/QualityControl cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/QualityControl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/QualityControl.dir/QualityControl.cpp.o -o ../../bin/QualityControl ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o -MF CMakeFiles/RTModel.dir/RTModel.cpp.o.d -o CMakeFiles/RTModel.dir/RTModel.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp [ 95%] Linking CXX executable ../../bin/RTModel cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTModel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/RTModel.dir/RTModel.cpp.o -o ../../bin/RTModel ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/RTPredict.dir/RTPredict.cpp.o -o ../../bin/RTPredict ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -MF CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d -o CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp [ 96%] Linking CXX executable ../../bin/SeedListGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SeedListGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o -o ../../bin/SeedListGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so 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src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -MF CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d -o CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp [ 96%] Linking CXX executable ../../bin/SpecLibSearcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibSearcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o -o ../../bin/SpecLibSearcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -MF CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d -o CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterBernNorm cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterBernNorm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o -o ../../bin/SpectraFilterBernNorm ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -MF CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d -o CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterMarkerMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterMarkerMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o -o ../../bin/SpectraFilterMarkerMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -MF CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d -o CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterNLargest cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNLargest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o -o ../../bin/SpectraFilterNLargest ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -MF CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d -o CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp [ 96%] Linking CXX executable ../../bin/SpectraFilterNormalizer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterNormalizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o -o ../../bin/SpectraFilterNormalizer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -MF CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d -o CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterParentPeakMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterParentPeakMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o -o ../../bin/SpectraFilterParentPeakMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -MF CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d -o CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterScaler cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterScaler.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o -o ../../bin/SpectraFilterScaler ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -MF CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d -o CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterSqrtMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterSqrtMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o -o ../../bin/SpectraFilterSqrtMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -MF CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d -o CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterThresholdMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterThresholdMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o -o ../../bin/SpectraFilterThresholdMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -MF CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d -o CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp [ 97%] Linking CXX executable ../../bin/SpectraFilterWindowMower cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraFilterWindowMower.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o -o ../../bin/SpectraFilterWindowMower ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -MF CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d -o CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp [ 97%] Linking CXX executable ../../bin/SpectraMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpectraMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o -o ../../bin/SpectraMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o -MF CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d -o CMakeFiles/TextExporter.dir/TextExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp [ 98%] Linking CXX executable ../../bin/TextExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TextExporter.dir/TextExporter.cpp.o -o ../../bin/TextExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -MF CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d -o CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp [ 98%] Linking CXX executable ../../bin/TOFCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/TOFCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o -o ../../bin/TOFCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -MF CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d -o CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp [100%] Linking CXX executable ../../bin/XTandemAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/XTandemAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -fopenmp CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o -o ../../bin/XTandemAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -MF CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d -o CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp [100%] Linking CXX executable ../../bin/ExecutePipeline cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExecutePipeline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o -o ../../bin/ExecutePipeline ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ExecutePipeline make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPP make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f CMakeFiles/Makefile2 UTILS make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 76 make -f CMakeFiles/Makefile2 src/utils/CMakeFiles/UTILS.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target OpenMS_GUI make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -MF CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d -o CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp [ 84%] Linking CXX executable ../../bin/INIUpdater cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/INIUpdater.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o -o ../../bin/INIUpdater ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target INIUpdater make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -MF CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d -o CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp [ 84%] Linking CXX executable ../../bin/AccurateMassSearch cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AccurateMassSearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o -o ../../bin/AccurateMassSearch ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -MF CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d -o CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 84%] Linking CXX executable ../../bin/AssayGeneratorMetabo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/AssayGeneratorMetabo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o -o ../../bin/AssayGeneratorMetabo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -MF CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d -o CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp [ 84%] Linking CXX executable ../../bin/ClusterMassTraces cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTraces.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o -o ../../bin/ClusterMassTraces ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -MF CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d -o CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp [ 84%] Linking CXX executable ../../bin/ClusterMassTracesByPrecursor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClusterMassTracesByPrecursor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o -o ../../bin/ClusterMassTracesByPrecursor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Building CXX object src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o -MF CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d -o CMakeFiles/CVInspector.dir/CVInspector.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp [ 84%] Linking CXX executable ../../bin/CVInspector cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/CVInspector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/CVInspector.dir/CVInspector.cpp.o -o ../../bin/CVInspector ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -MF CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d -o CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp [ 85%] Linking CXX executable ../../bin/DatabaseFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DatabaseFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o -o ../../bin/DatabaseFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -MF CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d -o CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPDecoyDatabase::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp:250:27: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 250 | random_shuffle(tokenized.begin(), tokenized.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:67, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 85%] Linking CXX executable ../../bin/DecoyDatabase cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DecoyDatabase.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o -o ../../bin/DecoyDatabase ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -MF CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d -o CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp [ 85%] Linking CXX executable ../../bin/DeMeanderize cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeMeanderize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o -o ../../bin/DeMeanderize ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Building CXX object src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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/usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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Linking CXX executable ../../bin/DigestorMotif cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigestorMotif.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o -o ../../bin/DigestorMotif ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Building CXX object src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o -MF CMakeFiles/Epifany.dir/Epifany.cpp.o.d -o CMakeFiles/Epifany.dir/Epifany.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp [ 86%] Linking CXX executable ../../bin/Epifany cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/Epifany.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Epifany.dir/Epifany.cpp.o -o ../../bin/Epifany ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -MF CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d -o CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp [ 86%] Linking CXX executable ../../bin/ERPairFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ERPairFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -MF CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d -o CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp [ 88%] Linking CXX executable ../../bin/FeatureFinderMetaboIdent cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderMetaboIdent.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o -o ../../bin/FeatureFinderMetaboIdent ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FeatureFinderMetaboIdent make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp [ 88%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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-D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp [ 89%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp [ 90%] Building CXX object src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DSuperHirn_EXPORTS -I/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -I/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o -MF CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o.d -o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp [ 90%] Linking CXX shared library ../../lib/i386-linux-gnu/libSuperHirn.so cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/cmake -E cmake_link_script CMakeFiles/SuperHirn.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libSuperHirn.so.2.6.0 -o ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn && /usr/bin/cmake -E cmake_symlink_library ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 ../../lib/i386-linux-gnu/libSuperHirn.so make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target SuperHirn make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Building CXX object src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -MF CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o.d -o CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp [ 90%] Linking CXX executable ../../bin/FeatureFinderSuperHirn cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FeatureFinderSuperHirn.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o -o ../../bin/FeatureFinderSuperHirn /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libSuperHirn.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp [ 92%] Linking CXX executable ../../bin/FFEval cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFEval.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/FFEval.dir/FFEval.cpp.o -o ../../bin/FFEval ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so 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/usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp [ 92%] Linking CXX executable ../../bin/IDDecoyProbability cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDDecoyProbability.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o -o ../../bin/IDDecoyProbability ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -MF CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d -o CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes TOPPIDExtractor::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp:192:21: warning: 'void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 192 | random_shuffle(indices.begin(), indices.end()); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:67, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp:35: /usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here 4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ [ 92%] Linking CXX executable ../../bin/IDExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o -o ../../bin/IDExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -MF CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d -o CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp [ 92%] Linking CXX executable ../../bin/IDMassAccuracy cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDMassAccuracy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o -o ../../bin/IDMassAccuracy ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -MF CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d -o CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp [ 92%] Linking CXX executable ../../bin/IDScoreSwitcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/IDScoreSwitcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o -o ../../bin/IDScoreSwitcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils 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/build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -MF CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d -o CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp [ 92%] Linking CXX executable ../../bin/IDSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[5]: Leaving directory 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/usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -MF CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d -o CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp [ 92%] Linking CXX executable ../../bin/LabeledEval cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabeledEval.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Building CXX object src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -MF CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d -o CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp [ 92%] Linking CXX executable ../../bin/MassCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MassCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o -o ../../bin/MassCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -MF CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d -o CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp [ 93%] Linking CXX executable ../../bin/MetaboliteAdductDecharger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteAdductDecharger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o -o ../../bin/MetaboliteAdductDecharger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -MF CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d -o CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp [ 93%] Linking CXX executable ../../bin/MetaboliteSpectralMatcher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaboliteSpectralMatcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o -o ../../bin/MetaboliteSpectralMatcher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -MF CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d -o CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:195:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 195 | public std::binary_function, vector, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h:37, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:35: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:205:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 205 | public std::binary_function, pair, bool> | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:215:15: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 215 | public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/iostream:41, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h:40, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h:39: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(double) [with _CharT = char; _Traits = std::char_traits]', inlined from 'MapRateToScoreType MetaProSIP::normalizeToMax(const MapRateToScoreType&)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:2480:52, inlined from 'virtual OpenMS::TOPPBase::ExitCodes MetaProSIP::main_(int, const char**)' at /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:3529:105: /usr/include/c++/13/ostream:223:25: warning: 'best_rate' may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp: In member function 'virtual OpenMS::TOPPBase::ExitCodes MetaProSIP::main_(int, const char**)': /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp:2475:12: note: 'best_rate' was declared here 2475 | double best_rate, best_score; | ^~~~~~~~~ [ 93%] Linking CXX executable ../../bin/MetaProSIP cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MetaProSIP.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o -o ../../bin/MetaProSIP ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -MF CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d -o CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp [ 93%] Linking CXX executable ../../bin/MRMPairFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMPairFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o -o ../../bin/MRMPairFinder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem 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CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d -o CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp [ 93%] Linking CXX executable ../../bin/MSFraggerAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSFraggerAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o -o ../../bin/MSFraggerAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Building CXX object src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp [ 94%] Linking CXX executable ../../bin/MSstatsConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MSstatsConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o -o ../../bin/MSstatsConverter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so 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/usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -MF CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d -o CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp [ 94%] Linking CXX executable ../../bin/MultiplexResolver cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiplexResolver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o -o ../../bin/MultiplexResolver ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -MF CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d -o CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp [ 94%] Linking CXX executable ../../bin/MzMLSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MzMLSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o -o ../../bin/MzMLSplitter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -MF CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d -o CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp [ 94%] Linking CXX executable ../../bin/NovorAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NovorAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o -o ../../bin/NovorAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -MF CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d -o CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp [ 94%] Linking CXX executable ../../bin/NucleicAcidSearchEngine cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicAcidSearchEngine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o -o ../../bin/NucleicAcidSearchEngine ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -MF CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d -o CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp [ 94%] Linking CXX executable ../../bin/OpenMSInfo cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMSInfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o -o ../../bin/OpenMSInfo ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -MF CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d -o CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp [ 94%] Linking CXX executable ../../bin/PeakPickerIterative cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PeakPickerIterative.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o -o ../../bin/PeakPickerIterative ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -MF CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d -o CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp [ 94%] Linking CXX executable ../../bin/PSMFeatureExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/PSMFeatureExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o -o ../../bin/PSMFeatureExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -MF CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d -o CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp [ 94%] Linking CXX executable ../../bin/QCCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o -o ../../bin/QCCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -MF CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d -o CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp [ 96%] Linking CXX executable ../../bin/QCEmbedder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCEmbedder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o -o ../../bin/QCEmbedder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o -MF CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d -o CMakeFiles/QCExporter.dir/QCExporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp [ 96%] Linking CXX executable ../../bin/QCExporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCExporter.dir/QCExporter.cpp.o -o ../../bin/QCExporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -MF CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d -o CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp [ 96%] Linking CXX executable ../../bin/QCExtractor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCExtractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o -o ../../bin/QCExtractor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB 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/usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o -MF CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d -o CMakeFiles/QCImporter.dir/QCImporter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp [ 96%] Linking CXX executable ../../bin/QCImporter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCImporter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCImporter.dir/QCImporter.cpp.o -o ../../bin/QCImporter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem 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CMakeFiles/QCMerger.dir/QCMerger.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp [ 96%] Linking CXX executable ../../bin/QCMerger cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCMerger.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCMerger.dir/QCMerger.cpp.o -o ../../bin/QCMerger ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -MF CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d -o CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp [ 96%] Linking CXX executable ../../bin/QCShrinker cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/QCShrinker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o -o ../../bin/QCShrinker ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -MF CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d -o CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp:85: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/vector:63, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h:36, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp:34: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 96%] Linking CXX executable ../../bin/ProteomicsLFQ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ProteomicsLFQ.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o -o ../../bin/ProteomicsLFQ ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -MF CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d -o CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp [ 96%] Linking CXX executable ../../bin/RNADigestor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNADigestor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o -o ../../bin/RNADigestor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -MF CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d -o CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp [ 96%] Linking CXX executable ../../bin/RNAMassCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNAMassCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o -o ../../bin/RNAMassCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -MF CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d -o CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp [ 96%] Linking CXX executable ../../bin/RNPxlXICFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlXICFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o -o ../../bin/RNPxlXICFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -MF CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d -o CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp In file included from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/basic_allocator.h:53, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic.h:74, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence.h:51, from /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/index.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h:44, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp:37: In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Size::Type seqan::resize(T&, TSize) [with T = String >; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/sequence_interface.h:2143:18, inlined from 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:570:11: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/new_allocator.h:34, from /usr/include/i386-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp:35: /usr/include/c++/13/new: In function 'void seqan::_reportHit(TFinder&, const Pattern >&, PatternAuxData&) [with TFinder = Finder, Alloc<> > >; TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::VertexDescriptor > >::Type seqan::addVertex(Graph >&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:398:33, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:98:41, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ In function 'void seqan::allocate(T&, TValue*&, TSize, const Tag&) [with T = String >; TValue = unsigned int; TSize = unsigned int; TUsage = AllocateStorage_]', inlined from 'typename seqan::Value > >::Type* seqan::_allocateStorage(String >&, TSize) [with TValue = unsigned int; TSpec = void; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_alloc.h:385:13, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1685:28, inlined from 'typename seqan::Value >::Type* seqan::_reallocateStorage(String&, TSize, Generous) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1730:30, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1835:83, inlined from 'void seqan::_reserveStorage(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1821:1, inlined from 'typename seqan::Size >::Type seqan::reserve(String&, TSize_, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize_ = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1855:20, inlined from 'static typename seqan::Size::Type seqan::_Resize_String::resize_(T&, typename seqan::Size::Type) [with T = seqan::String >; TExpand = seqan::Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1887:45, inlined from 'typename seqan::Size >::Type seqan::resize(String&, TSize, Tag) [with TValue = unsigned int; TSpec = Alloc<>; TSize = unsigned int; TExpand = TagGenerous_]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/sequence/string_base.h:1952:50, inlined from 'typename seqan::Value >::Type seqan::obtainId(IdManager&) [with TIdType = unsigned int; TSpec = Tag]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_idmanager.h:205:9, inlined from 'typename seqan::EdgeDescriptor > >::Type seqan::addEdge(Graph >&, TVertexDescriptor, TVertexDescriptor, TLabel) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TVertexDescriptor = unsigned int; TLabel = SimpleType]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_automaton.h:436:11, inlined from 'void seqan::_addStringToTrie(Graph >&, TTerminalStateMap&, const TKeyword&, const TPos&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeyword = String, Alloc<> >; TPos = unsigned int]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:101:10, inlined from 'void seqan::createTrie(Graph >&, TTerminalStateMap&, const TKeywords&) [with TAlphabet = SimpleType; TCargo = void; TSpec = Tag; TTerminalStateMap = String > >; TKeywords = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/graph_types/graph_impl_trie.h:166:46, inlined from 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]' at /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:422:15: /build/reproducible-path/openms-2.6.0+cleaned1/debian/seqan/basic/allocator_interface.h:297:35: warning: argument 1 value '4294967288' exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 297 | */ data = (TValue *) operator new(count * sizeof(TValue)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/new: In function 'void seqan::_createAcTrie(Pattern >&) [with TNeedle = StringSet, Alloc<> > >]': /usr/include/c++/13/new:126:26: note: in a call to allocation function 'void* operator new(std::size_t)' declared here 126 | _GLIBCXX_NODISCARD void* operator new(std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^~~~~~~~ [ 96%] Linking CXX executable ../../bin/RNPxlSearch cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RNPxlSearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o -o ../../bin/RNPxlSearch ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -MF CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d -o CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp [ 96%] Linking CXX executable ../../bin/RTEvaluation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/RTEvaluation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o -o ../../bin/RTEvaluation ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -MF CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d -o CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp [ 96%] Linking CXX executable ../../bin/SemanticValidator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SemanticValidator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o -o ../../bin/SemanticValidator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -MF CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d -o CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp [ 96%] Linking CXX executable ../../bin/SequenceCoverageCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SequenceCoverageCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o -o ../../bin/SequenceCoverageCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o cd 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-Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -MF CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d -o CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp [ 96%] Linking CXX executable ../../bin/SimpleSearchEngine cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimpleSearchEngine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o -o ../../bin/SimpleSearchEngine ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -MF CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d -o CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp [ 96%] Linking CXX executable ../../bin/SiriusAdapter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SiriusAdapter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o -o ../../bin/SiriusAdapter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB 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src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -MF CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d -o CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp [ 97%] Linking CXX executable ../../bin/SpecLibCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpecLibCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o -o ../../bin/SpecLibCreator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so 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src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o -MF CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d -o CMakeFiles/StaticModification.dir/StaticModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp [ 98%] Linking CXX executable ../../bin/StaticModification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/StaticModification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/StaticModification.dir/StaticModification.cpp.o -o ../../bin/StaticModification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl 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src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -MF CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d -o CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp [ 98%] Linking CXX executable ../../bin/SvmTheoreticalSpectrumGeneratorTrainer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -o ../../bin/SvmTheoreticalSpectrumGeneratorTrainer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -MF CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d -o CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp [ 98%] Linking CXX executable ../../bin/TICCalculator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TICCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o -o ../../bin/TICCalculator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -MF CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d -o CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp [ 98%] Linking CXX executable ../../bin/TransformationEvaluation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformationEvaluation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o -o ../../bin/TransformationEvaluation ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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/build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -MF CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d -o CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp [ 98%] Linking CXX executable ../../bin/XMLValidator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/XMLValidator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o -o ../../bin/XMLValidator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -MF CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d -o CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp [ 98%] Linking CXX executable ../../bin/TargetedFileConverter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/TargetedFileConverter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -MF CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d -o CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h:39, from /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 98%] Linking CXX executable ../../bin/OpenSwathDIAPreScoring cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathDIAPreScoring.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o -o ../../bin/OpenSwathDIAPreScoring ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -MF CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d -o CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathMzMLFileCacher cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathMzMLFileCacher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o -o ../../bin/OpenSwathMzMLFileCacher ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -MF CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d -o CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathWorkflow cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathWorkflow.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o -o ../../bin/OpenSwathWorkflow ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -MF CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d -o CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathFileSplitter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathFileSplitter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o -o ../../bin/OpenSwathFileSplitter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -MF CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d -o CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp [ 98%] Linking CXX executable ../../bin/OpenSwathRewriteToFeatureXML cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathRewriteToFeatureXML.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o -o ../../bin/OpenSwathRewriteToFeatureXML ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -MF CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d -o CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp [ 98%] Linking CXX executable ../../bin/MRMTransitionGroupPicker cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/MRMTransitionGroupPicker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o -o ../../bin/MRMTransitionGroupPicker ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/include -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -MF CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d -o CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp [100%] Linking CXX executable ../../bin/ImageCreator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageCreator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o -o ../../bin/ImageCreator ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ImageCreator make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target UTILS make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' # We need to tell the documenter program where the shared data are # in the source tree: share/OpenMS. That is not the install directory! # Also tell the CMake build system that we'll build the docs without # access to a XWindow server. VERBOSE=1 \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS \ HAS_XSERVER=OFF \ dh_auto_build -- doc_minimal cd obj-i686-linux-gnu && make -j1 "INSTALL=install --strip-program=true" doc_minimal VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 doc_minimal make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 93 make -f CMakeFiles/Makefile2 doc/CMakeFiles/doc_minimal.dir/all make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 56%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target OpenMS_GUI make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/INIUpdater.dir/INIUpdater.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIUpdater make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target INIUpdater make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/AccurateMassSearch.dir/AccurateMassSearch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target AccurateMassSearch make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/AssayGeneratorMetabo.dir/AssayGeneratorMetabo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target AssayGeneratorMetabo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ClusterMassTraces.dir/ClusterMassTraces.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ClusterMassTraces make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/ClusterMassTracesByPrecursor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ClusterMassTracesByPrecursor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/CVInspector.dir/CVInspector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CVInspector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DatabaseFilter.dir/DatabaseFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DatabaseFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DecoyDatabase.dir/DecoyDatabase.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DecoyDatabase make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DeMeanderize.dir/DeMeanderize.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DeMeanderize make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/Digestor.dir/Digestor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Digestor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/DigestorMotif.dir/DigestorMotif.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DigestorMotif make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/Epifany.dir/Epifany.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Epifany make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ERPairFinder.dir/ERPairFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ERPairFinder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/FeatureFinderMetaboIdent.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMetaboIdent make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target FeatureFinderMetaboIdent make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Dependencies file "src/superhirn/CMakeFiles/SuperHirn.dir/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SuperHirn make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/superhirn/CMakeFiles/SuperHirn.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target SuperHirn make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/FeatureFinderSuperHirn.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderSuperHirn make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FFEval.dir/FFEval.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FFEval make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/FuzzyDiff.dir/FuzzyDiff.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FuzzyDiff make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDDecoyProbability.dir/IDDecoyProbability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDDecoyProbability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDExtractor.dir/IDExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDMassAccuracy.dir/IDMassAccuracy.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMassAccuracy make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDScoreSwitcher.dir/IDScoreSwitcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDScoreSwitcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/IDSplitter.dir/IDSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/LabeledEval.dir/LabeledEval.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target LabeledEval make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MassCalculator.dir/MassCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MassCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/MetaboliteAdductDecharger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaboliteAdductDecharger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/MetaboliteSpectralMatcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaboliteSpectralMatcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MetaProSIP.dir/MetaProSIP.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MetaProSIP make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MRMPairFinder.dir/MRMPairFinder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMPairFinder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSFraggerAdapter.dir/MSFraggerAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSFraggerAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSSimulator.dir/MSSimulator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSSimulator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target MSSimulator make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MSstatsConverter.dir/MSstatsConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSstatsConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MultiplexResolver.dir/MultiplexResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MultiplexResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MzMLSplitter.dir/MzMLSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MzMLSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/NovorAdapter.dir/NovorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NovorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/NucleicAcidSearchEngine.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NucleicAcidSearchEngine make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenMSInfo.dir/OpenMSInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenMSInfo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/PeakPickerIterative.dir/PeakPickerIterative.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerIterative make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/PSMFeatureExtractor.dir/PSMFeatureExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PSMFeatureExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCCalculator.dir/QCCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCEmbedder.dir/QCEmbedder.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCEmbedder make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCExporter.dir/QCExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCExporter make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCExtractor.dir/QCExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCImporter.dir/QCImporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCImporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCMerger.dir/QCMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/QCShrinker.dir/QCShrinker.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QCShrinker make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ProteomicsLFQ.dir/ProteomicsLFQ.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteomicsLFQ make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNADigestor.dir/RNADigestor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNADigestor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNAMassCalculator.dir/RNAMassCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNAMassCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNPxlXICFilter.dir/RNPxlXICFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNPxlXICFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RNPxlSearch.dir/RNPxlSearch.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RNPxlSearch make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/RTEvaluation.dir/RTEvaluation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTEvaluation make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SemanticValidator.dir/SemanticValidator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SemanticValidator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SequenceCoverageCalculator.dir/SequenceCoverageCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SequenceCoverageCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SimpleSearchEngine.dir/SimpleSearchEngine.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SimpleSearchEngine make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SiriusAdapter.dir/SiriusAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SiriusAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SpecLibCreator.dir/SpecLibCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpecLibCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target SpecLibCreator make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/SpectraSTSearchAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraSTSearchAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target SpectraSTSearchAdapter make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/StaticModification.dir/StaticModification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target StaticModification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target StaticModification make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SvmTheoreticalSpectrumGeneratorTrainer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TICCalculator.dir/TICCalculator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TICCalculator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TransformationEvaluation.dir/TransformationEvaluation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TransformationEvaluation make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/XMLValidator.dir/XMLValidator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XMLValidator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/TargetedFileConverter.dir/TargetedFileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TargetedFileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/OpenSwathDIAPreScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathDIAPreScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/OpenSwathMzMLFileCacher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathMzMLFileCacher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathWorkflow.dir/OpenSwathWorkflow.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathWorkflow make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathFileSplitter.dir/OpenSwathFileSplitter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathFileSplitter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/OpenSwathRewriteToFeatureXML.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathRewriteToFeatureXML make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/MRMTransitionGroupPicker.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMTransitionGroupPicker make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/utils/CMakeFiles/ImageCreator.dir/ImageCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ImageCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target ImageCreator make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target UTILS make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/Resampler.dir/Resampler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Resampler make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target Resampler make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/BaselineFilter.dir/BaselineFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target BaselineFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CometAdapter.dir/CometAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CometAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CompNovo.dir/CompNovo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CompNovo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CompNovoCID.dir/CompNovoCID.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CompNovoCID make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ConsensusID.dir/ConsensusID.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ConsensusID make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ConsensusMapNormalizer.dir/ConsensusMapNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ConsensusMapNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/CruxAdapter.dir/CruxAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target CruxAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/DatabaseSuitability.dir/DatabaseSuitability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DatabaseSuitability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/Decharger.dir/Decharger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target Decharger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/DTAExtractor.dir/DTAExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target DTAExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/EICExtractor.dir/EICExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target EICExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ExternalCalibration.dir/ExternalCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ExternalCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FalseDiscoveryRate.dir/FalseDiscoveryRate.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FalseDiscoveryRate make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderCentroided.dir/FeatureFinderCentroided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderCentroided make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderIdentification.dir/FeatureFinderIdentification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderIdentification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/FeatureFinderIsotopeWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderIsotopeWavelet make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMetabo.dir/FeatureFinderMetabo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMetabo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMRM.dir/FeatureFinderMRM.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMRM make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureFinderMultiplex.dir/FeatureFinderMultiplex.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureFinderMultiplex make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerLabeled.dir/FeatureLinkerLabeled.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerLabeled make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/FeatureLinkerUnlabeled.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeled make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/FeatureLinkerUnlabeledKD.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeledKD make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/FeatureLinkerUnlabeledQT.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FeatureLinkerUnlabeledQT make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FidoAdapter.dir/FidoAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FidoAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileConverter.dir/FileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileConverter make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileFilter.dir/FileFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileFilter make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileInfo.dir/FileInfo.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileInfo make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/FileMerger.dir/FileMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target FileMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target FileMerger make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/GenericWrapper.dir/GenericWrapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target GenericWrapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/GNPSExport.dir/GNPSExport.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target GNPSExport make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/HighResPrecursorMassCorrector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target HighResPrecursorMassCorrector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDConflictResolver.dir/IDConflictResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDConflictResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDFileConverter.dir/IDFileConverter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDFileConverter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDFileConverter make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDFilter.dir/IDFilter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDFilter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDMapper.dir/IDMapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDMerger.dir/IDMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/IDPosteriorErrorProbability.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDPosteriorErrorProbability make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDRipper.dir/IDRipper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDRipper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IDRTCalibration.dir/IDRTCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IDRTCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InclusionExclusionListCreator.dir/InclusionExclusionListCreator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InclusionExclusionListCreator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InspectAdapter.dir/InspectAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InspectAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InspectAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/InternalCalibration.dir/InternalCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target InternalCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/IsobaricAnalyzer.dir/IsobaricAnalyzer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target IsobaricAnalyzer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/LuciphorAdapter.dir/LuciphorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target LuciphorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerIdentification.dir/MapAlignerIdentification.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerIdentification make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerPoseClustering.dir/MapAlignerPoseClustering.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerPoseClustering make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerSpectrum.dir/MapAlignerSpectrum.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerSpectrum make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapAlignerTreeGuided.dir/MapAlignerTreeGuided.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapAlignerTreeGuided make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapNormalizer.dir/MapNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapRTTransformer.dir/MapRTTransformer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapRTTransformer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MapStatistics.dir/MapStatistics.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MapStatistics make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MaRaClusterAdapter.dir/MaRaClusterAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MaRaClusterAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MascotAdapter.dir/MascotAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MascotAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MascotAdapterOnline.dir/MascotAdapterOnline.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MascotAdapterOnline make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MassTraceExtractor.dir/MassTraceExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MassTraceExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MRMMapper.dir/MRMMapper.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MRMMapper make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MSGFPlusAdapter.dir/MSGFPlusAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MSGFPlusAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MyriMatchAdapter.dir/MyriMatchAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MyriMatchAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/MzTabExporter.dir/MzTabExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target MzTabExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/NoiseFilterGaussian.dir/NoiseFilterGaussian.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NoiseFilterGaussian make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/NoiseFilterSGolay.dir/NoiseFilterSGolay.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target NoiseFilterSGolay make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OMSSAAdapter.dir/OMSSAAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OMSSAAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenPepXL.dir/OpenPepXL.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenPepXL make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenPepXLLF.dir/OpenPepXLLF.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenPepXLLF make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathAnalyzer.dir/OpenSwathAnalyzer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAnalyzer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/OpenSwathAssayGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathAssayGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/OpenSwathChromatogramExtractor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathChromatogramExtractor make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/OpenSwathConfidenceScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathConfidenceScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/OpenSwathDecoyGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathDecoyGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/OpenSwathFeatureXMLToTSV.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathFeatureXMLToTSV make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/OpenSwathRTNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target OpenSwathRTNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeakPickerHiRes.dir/PeakPickerHiRes.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerHiRes make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeakPickerWavelet.dir/PeakPickerWavelet.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeakPickerWavelet make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PepNovoAdapter.dir/PepNovoAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PepNovoAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PeptideIndexer.dir/PeptideIndexer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PeptideIndexer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PercolatorAdapter.dir/PercolatorAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PercolatorAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PhosphoScoring.dir/PhosphoScoring.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PhosphoScoring make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PrecursorIonSelector.dir/PrecursorIonSelector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PrecursorIonSelector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PrecursorMassCorrector.dir/PrecursorMassCorrector.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PrecursorMassCorrector make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinInference.dir/ProteinInference.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinInference make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinQuantifier.dir/ProteinQuantifier.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinQuantifier make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ProteinResolver.dir/ProteinResolver.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ProteinResolver make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PTModel.dir/PTModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PTModel make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/PTPredict.dir/PTPredict.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target PTPredict make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/QualityControl.dir/QualityControl.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target QualityControl make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/RTModel.dir/RTModel.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTModel make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/RTPredict.dir/RTPredict.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target RTPredict make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SeedListGenerator.dir/SeedListGenerator.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SeedListGenerator make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SeedListGenerator make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpecLibSearcher.dir/SpecLibSearcher.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpecLibSearcher make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterBernNorm.dir/SpectraFilterBernNorm.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterBernNorm make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/SpectraFilterMarkerMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterMarkerMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterNLargest.dir/SpectraFilterNLargest.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterNLargest make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterNormalizer.dir/SpectraFilterNormalizer.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterNormalizer make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/SpectraFilterParentPeakMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterParentPeakMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterScaler.dir/SpectraFilterScaler.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterScaler make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/SpectraFilterSqrtMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterSqrtMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/SpectraFilterThresholdMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterThresholdMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraFilterWindowMower.dir/SpectraFilterWindowMower.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraFilterWindowMower make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/SpectraMerger.dir/SpectraMerger.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SpectraMerger make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/TextExporter.dir/TextExporter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TextExporter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/TOFCalibration.dir/TOFCalibration.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOFCalibration make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/XFDR.dir/XFDR.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XFDR make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/XTandemAdapter.dir/XTandemAdapter.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target XTandemAdapter make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" Dependencies file "src/topp/CMakeFiles/ExecutePipeline.dir/ExecutePipeline.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target ExecutePipeline make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target ExecutePipeline make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[5]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target TOPP make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[5]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Build the doxygen documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 284 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1147 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1283 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1575 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1877 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1893 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1967 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2072 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2260 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2302 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2309 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2533 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard-resources Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/topp Searching for files in directory /build/reproducible-path/openms-2.6.0+cleaned1/src/utils Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Changelog.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Changelog.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/FAQ.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/FAQ.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Main.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Main.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Modules.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/Modules.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/QuickStart.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/QuickStart.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/UTILS.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/public/UTILS.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-linux.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing memFontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ber references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating image form_0.png for formula Generating image form_1.png for formula Generating image form_2.png for formula Generating image form_3.png for formula Generating image form_4.png for formula Generating image form_5.png for formula Generating image form_6.png for formula Generating image form_7.png for formula Generating image form_8.png for formula Generating image form_9.png for formula Generating image form_0_dark.png for formula Generating image form_1_dark.png for formula Generating image form_2_dark.png for formula Generating image form_3_dark.png for formula Generating image form_4_dark.png for formula Generating image form_5_dark.png for formula Generating image form_6_dark.png for formula Generating image form_7_dark.png for formula Generating image form_8_dark.png for formula Generating image form_9_dark.png for formula Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... Parsing code for file GenericWrapper.cpp... Parsing code for file GNPSExport.cpp... Parsing code for file HighResPrecursorMassCorrector.cpp... Parsing code for file IDConflictResolver.cpp... Parsing code for file IDFileConverter.cpp... Parsing code for file IDFilter.cpp... Parsing code for file IDMapper.cpp... Parsing code for file IDMerger.cpp... Parsing code for file IDPosteriorErrorProbability.cpp... Parsing code for file IDRipper.cpp... Parsing code for file IDRTCalibration.cpp... Parsing code for file InclusionExclusionListCreator.cpp... Parsing code for file InspectAdapter.cpp... Parsing code for file InternalCalibration.cpp... Parsing code for file IsobaricAnalyzer.cpp... Parsing code for file LuciphorAdapter.cpp... Parsing code for file MapAlignerIdentification.cpp... Parsing code for file MapAlignerPoseClustering.cpp... Parsing code for file MapAlignerSpectrum.cpp... Parsing code for file MapAlignerTreeGuided.cpp... Parsing code for file MapNormalizer.cpp... Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... Parsing code for file OpenSwathRTNormalizer.cpp... Parsing code for file PeakPickerHiRes.cpp... Parsing code for file PeakPickerWavelet.cpp... Parsing code for file PepNovoAdapter.cpp... Parsing code for file PeptideIndexer.cpp... Parsing code for file PercolatorAdapter.cpp... Parsing code for file PhosphoScoring.cpp... Parsing code for file PrecursorIonSelector.cpp... Parsing code for file PrecursorMassCorrector.cpp... Parsing code for file ProteinInference.cpp... Parsing code for file ProteinQuantifier.cpp... Parsing code for file ProteinResolver.cpp... Parsing code for file PTModel.cpp... Parsing code for file PTPredict.cpp... Parsing code for file QualityControl.cpp... Parsing code for file Resampler.cpp... Parsing code for file RTModel.cpp... Parsing code for file RTPredict.cpp... Parsing code for file SeedListGenerator.cpp... Parsing code for file SpecLibSearcher.cpp... Parsing code for file SpectraFilterBernNorm.cpp... Parsing code for file SpectraFilterMarkerMower.cpp... Parsing code for file SpectraFilterNLargest.cpp... Parsing code for file SpectraFilterNormalizer.cpp... Parsing code for file SpectraFilterParentPeakMower.cpp... Parsing code for file SpectraFilterScaler.cpp... Parsing code for file SpectraFilterSqrtMower.cpp... Parsing code for file SpectraFilterThresholdMower.cpp... Parsing code for file SpectraFilterWindowMower.cpp... Parsing code for file SpectraMerger.cpp... Parsing code for file TextExporter.cpp... Parsing code for file TOFCalibration.cpp... Parsing code for file XFDR.cpp... Parsing code for file XTandemAdapter.cpp... Parsing code for file AccurateMassSearch.cpp... Parsing code for file AssayGeneratorMetabo.cpp... Parsing code for file ClusterMassTraces.cpp... Parsing code for file ClusterMassTracesByPrecursor.cpp... Parsing code for file CVInspector.cpp... Parsing code for file DatabaseFilter.cpp... Parsing code for file DecoyDatabase.cpp... Parsing code for file DeMeanderize.cpp... Parsing code for file Digestor.cpp... Parsing code for file DigestorMotif.cpp... Parsing code for file Epifany.cpp... Parsing code for file ERPairFinder.cpp... Parsing code for file FeatureFinderMetaboIdent.cpp... Parsing code for file FeatureFinderSuperHirn.cpp... Parsing code for file FFEval.cpp... Parsing code for file FuzzyDiff.cpp... Parsing code for file IDDecoyProbability.cpp... Parsing code for file IDExtractor.cpp... Parsing code for file IDMassAccuracy.cpp... Parsing code for file IDScoreSwitcher.cpp... Parsing code for file IDSplitter.cpp... Parsing code for file ImageCreator.cpp... Parsing code for file INIUpdater.cpp... Parsing code for file LabeledEval.cpp... Parsing code for file MassCalculator.cpp... Parsing code for file MetaboliteAdductDecharger.cpp... Parsing code for file MetaboliteSpectralMatcher.cpp... Parsing code for file MetaProSIP.cpp... Parsing code for file MRMPairFinder.cpp... Parsing code for file MRMTransitionGroupPicker.cpp... Parsing code for file MSFraggerAdapter.cpp... Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... Parsing code for file RNADigestor.cpp... Parsing code for file RNAMassCalculator.cpp... Parsing code for file RNPxlSearch.cpp... Parsing code for file RNPxlXICFilter.cpp... Parsing code for file RTEvaluation.cpp... Parsing code for file SemanticValidator.cpp... Parsing code for file SequenceCoverageCalculator.cpp... Parsing code for file SimpleSearchEngine.cpp... Parsing code for file SiriusAdapter.cpp... Parsing code for file SpecLibCreator.cpp... Parsing code for file SpectraSTSearchAdapter.cpp... Parsing code for file StaticModification.cpp... Parsing code for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing code for file TargetedFileConverter.cpp... Parsing code for file TICCalculator.cpp... Parsing code for file TransformationEvaluation.cpp... Parsing code for file XMLValidator.cpp... Generating file documentation... Generating docs for file common-cmake-parameters.doxygen... Generating docs for file install-linux-bin.doxygen... Generating docs for file install-linux.doxygen... Generating docs for file install-macs-bin.doxygen... Generating docs for file install-macs.doxygen... Generating docs for file install-win-bin.doxygen... Generating docs for file install-win.doxygen... Generating docs for file Changelog.doxygen... Generating docs for file ExternalCode.doxygen... Generating docs for file FAQ.doxygen... Generating docs for file KnownDevBugs.doxygen... Generating docs for file Main.doxygen... Generating docs for file Modules.doxygen... Generating docs for file OpenMS_Tutorial_html.doxygen... Generating docs for file PyOpenMS.doxygen... Generating docs for file QuickStart.doxygen... Generating docs for file TOPP.doxygen... Generating docs for file TOPP_Tutorial_html.doxygen... Generating docs for file UTILS.doxygen... Generating docs for file OpenMS_Tutorial.doxygen... Generating docs for file TOPP_advanced.doxygen... Generating docs for file TOPP_concepts.doxygen... Generating docs for file TOPP_scripting.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPAS.doxygen... Generating docs for file TOPPView_calling_topp.doxygen... Generating docs for file TOPPView_interface.doxygen... Generating docs for file INIFileEditor.cpp... Generating docs for file SwathWizard.cpp... Generating docs for file TOPPAS.cpp... Generating docs for file TOPPView.cpp... Generating docs for file INIFileEditorWindow.cpp... Generating docs for file QApplicationTOPP.cpp... Generating docs for file SwathWizardBase.cpp... Generating docs for file TOPPASBase.cpp... Generating docs for file TOPPViewBase.cpp... Generating docs for file BaselineFilter.cpp... Generating docs for file CometAdapter.cpp... Generating docs for file CompNovo.cpp... Generating docs for file CompNovoCID.cpp... Generating docs for file ConsensusID.cpp... Generating docs for file ConsensusMapNormalizer.cpp... Generating docs for file CruxAdapter.cpp... Generating docs for file DatabaseSuitability.cpp... Generating docs for file Decharger.cpp... Generating docs for file DTAExtractor.cpp... Generating docs for file EICExtractor.cpp... Generating docs for file ExecutePipeline.cpp... Generating docs for file ExternalCalibration.cpp... Generating docs for file FalseDiscoveryRate.cpp... Generating docs for file FeatureFinderCentroided.cpp... Generating docs for file FeatureFinderIdentification.cpp... Generating docs for file FeatureFinderIsotopeWavelet.cpp... Generating docs for file FeatureFinderMetabo.cpp... Generating docs for file FeatureFinderMRM.cpp... Generating docs for file FeatureFinderMultiplex.cpp... Generating docs for file FeatureLinkerBase.cpp... Generating docs for file FeatureLinkerLabeled.cpp... Generating docs for file FeatureLinkerUnlabeled.cpp... Generating docs for file FeatureLinkerUnlabeledKD.cpp... Generating docs for file FeatureLinkerUnlabeledQT.cpp... Generating docs for file FidoAdapter.cpp... Generating docs for file FileConverter.cpp... Generating docs for file FileFilter.cpp... Generating docs for file FileInfo.cpp... Generating docs for file FileMerger.cpp... Generating docs for file GenericWrapper.cpp... Generating docs for file GNPSExport.cpp... Generating docs for file HighResPrecursorMassCorrector.cpp... Generating docs for file IDConflictResolver.cpp... Generating docs for file IDFileConverter.cpp... Generating docs for file IDFilter.cpp... Generating docs for file IDMapper.cpp... Generating docs for file IDMerger.cpp... Generating docs for file IDPosteriorErrorProbability.cpp... Generating docs for file IDRipper.cpp... Generating docs for file IDRTCalibration.cpp... Generating docs for file InclusionExclusionListCreator.cpp... Generating docs for file InspectAdapter.cpp... Generating docs for file InternalCalibration.cpp... Generating docs for file IsobaricAnalyzer.cpp... Generating docs for file LuciphorAdapter.cpp... Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... Generating docs for file OpenSwathAnalyzer.cpp... Generating docs for file OpenSwathAssayGenerator.cpp... Generating docs for file OpenSwathChromatogramExtractor.cpp... Generating docs for file OpenSwathConfidenceScoring.cpp... Generating docs for file OpenSwathDecoyGenerator.cpp... Generating docs for file OpenSwathFeatureXMLToTSV.cpp... Generating docs for file OpenSwathRTNormalizer.cpp... Generating docs for file PeakPickerHiRes.cpp... Generating docs for file PeakPickerWavelet.cpp... Generating docs for file PepNovoAdapter.cpp... Generating docs for file PeptideIndexer.cpp... Generating docs for file PercolatorAdapter.cpp... Generating docs for file PhosphoScoring.cpp... Generating docs for file PrecursorIonSelector.cpp... Generating docs for file PrecursorMassCorrector.cpp... Generating docs for file ProteinInference.cpp... Generating docs for file ProteinQuantifier.cpp... Generating docs for file ProteinResolver.cpp... Generating docs for file PTModel.cpp... Generating docs for file PTPredict.cpp... Generating docs for file QualityControl.cpp... Generating docs for file Resampler.cpp... Generating docs for file RTModel.cpp... Generating docs for file RTPredict.cpp... Generating docs for file SeedListGenerator.cpp... Generating docs for file SpecLibSearcher.cpp... Generating docs for file SpectraFilterBernNorm.cpp... Generating docs for file SpectraFilterMarkerMower.cpp... Generating docs for file SpectraFilterNLargest.cpp... Generating docs for file SpectraFilterNormalizer.cpp... Generating docs for file SpectraFilterParentPeakMower.cpp... Generating docs for file SpectraFilterScaler.cpp... Generating docs for file SpectraFilterSqrtMower.cpp... Generating docs for file SpectraFilterThresholdMower.cpp... Generating docs for file SpectraFilterWindowMower.cpp... Generating docs for file SpectraMerger.cpp... Generating docs for file TextExporter.cpp... Generating docs for file TOFCalibration.cpp... Generating docs for file XFDR.cpp... Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FeatureFinderSuperHirn.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... GeneratinFontconfig error: No writable cache directories Fontconfig error: No writable cache directories g docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... Generating docs for page TOPP_example_featuredetection... Generating docs for page TOPP_example_featuregrouping... Generating docs for page TOPP_example_calibration... Generating docs for page TOPP_example_ppp... Generating docs for page TOPP_example_convert... Generating docs for page TOPPAS_general... Generating docs for page TOPPAS_interface... Generating docs for page TOPPAS_examples... Generating docs for page TOPPView_baseline_reduction... Generating docs for page TOPPView_smoothing... Generating docs for page TOPPView_peakpicking... Generating docs for page TOPPView_feature_detection_centroided... Generating docs for page TOPPView_introduction... Generating docs for page TOPPView_views... Generating docs for page TOPPView_modes... Generating docs for page TOPPView_analysis... Generating docs for page TOPPView_editing... Generating docs for page TOPPView_hotkeys... Generating docs for page ChangeLog... Generating docs for page external_code... Generating docs for page FAQ... Generating docs for page known_dev_bugs... Generating docs for page OpenMS_tutorial... Generating docs for page pyOpenMS... Generating docs for page Quickstart... Generating docs for page TOPP_documentation... Generating docs for page TOPP_tutorial... Generating docs for page TOPPAS_tutorial... Generating docs for page UTILS_documentation... Generating docs for page install_linux_bin... Generating docs for page install_linux... Generating docs for page install_mac_bin... Generating docs for page install_mac... Generating docs for page install_win_bin... Generating docs for page install_win... Generating docs for page TOPP_INIFileEditor... Generating docs for page TOPP_SwathWizard... Generating docs for page TOPP_TOPPAS... Generating docs for page TOPP_TOPPView... Generating docs for page TOPP_BaselineFilter... Generating docs for page TOPP_CometAdapter... Generating docs for page TOPP_CompNovo... Generating docs for page TOPP_CompNovoCID... Generating docs for page TOPP_ConsensusID... Generating docs for page TOPP_ConsensusMapNormalizer... Generating docs for page TOPP_CruxAdapter... Generating docs for page TOPP_DatabaseSuitability... Generating docs for page TOPP_Decharger... Generating docs for page TOPP_DTAExtractor... Generating docs for page TOPP_EICExtractor... Generating docs for page TOPP_ExecutePipeline... Generating docs for page TOPP_ExternalCalibration... Generating docs for page TOPP_FalseDiscoveryRate... Generating docs for page TOPP_FeatureFinderCentroided... Generating docs for page TOPP_FeatureFinderIdentification... Generating docs for page TOPP_FeatureFinderIsotopeWavelet... Generating docs for page TOPP_FeatureFinderMetabo... Generating docs for page TOPP_FeatureFinderMRM... Generating docs for page TOPP_FeatureFinderMultiplex... Generating docs for page TOPP_FeatureLinkerBase... Generating docs for page TOPP_FeatureLinkerLabeled... Generating docs for page TOPP_FeatureLinkerUnlabeled... Generating docs for page TOPP_FeatureLinkerUnlabeledKD... Generating docs for page TOPP_FeatureLinkerUnlabeledQT... Generating docs for page TOPP_FidoAdapter... Generating docs for page TOPP_FileConverter... Generating docs for page TOPP_FileFilter... Generating docs for page TOPP_FileInfo... Generating docs for page TOPP_FileMerger... Generating docs for page TOPP_GenericWrapper... Generating docs for page TOPP_GNPSExport... Generating docs for page TOPP_HighResPrecursorMassCorrector... Generating docs for page TOPP_IDConflictResolver... Generating docs for page TOPP_IDFileConverter... Generating docs for page TOPP_IDFilter... Generating docs for page TOPP_IDMapper... Generating docs for page TOPP_IDMerger... Generating docs for page TOPP_IDPosteriorErrorProbability... Generating docs for page TOPP_IDRipper... Generating docs for page TOPP_IDRTCalibration... Generating docs for page TOPP_InclusionExclusionListCreator... Generating docs for page TOPP_InspectAdapter... Generating docs for page TOPP_InternalCalibration... Generating docs for page TOPP_IsobaricAnalyzer... Generating docs for page TOPP_LuciphorAdapter... Generating docs for page TOPP_MapAlignerIdentification... Generating docs for page TOPP_MapAlignerPoseClustering... Generating docs for page TOPP_MapAlignerSpectrum... Generating docs for page TOPP_MapAlignerTreeGuided... Generating docs for page TOPP_MapNormalizer... Generating docs for page TOPP_MapRTTransformer... Generating docs for page TOPP_MapStatistics... Generating docs for page TOPP_MaRaClusterAdapter... Generating docs for page TOPP_MascotAdapter... Generating docs for page TOPP_MascotAdapterOnline... Generating docs for page TOPP_MassTraceExtractor... Generating docs for page TOPP_MRMMapper... Generating docs for page TOPP_MSGFPlusAdapter... Generating docs for page TOPP_MyriMatchAdapter... Generating docs for page TOPP_MzTabExporter... Generating docs for page TOPP_NoiseFilterGaussian... Generating docs for page TOPP_NoiseFilterSGolay... Generating docs for page TOPP_OMSSAAdapter... Generating docs for page TOPP_OpenPepXL... Generating docs for page TOPP_OpenPepXLLF... Generating docs for page TOPP_OpenSwathAnalyzer... Generating docs for page TOPP_OpenSwathAssayGenerator... Generating docs for page TOPP_OpenSwathChromatogramExtractor... Generating docs for page TOPP_OpenSwathConfidenceScoring... Generating docs for page TOPP_OpenSwathDecoyGenerator... Generating docs for page TOPP_OpenSwathFeatureXMLToTSV... Generating docs for page TOPP_OpenSwathRTNormalizer... Generating docs for page TOPP_PeakPickerHiRes... Generating docs for page TOPP_PeakPickerWavelet... Generating docs for page TOPP_PepNovoAdapter... Generating docs for page TOPP_PeptideIndexer... Generating docs for page TOPP_PercolatorAdapter... Generating docs for page TOPP_PhosphoScoring... Generating docs for page TOPP_PrecursorIonSelector... Generating docs for page TOPP_PrecursorMassCorrector... Generating docs for page TOPP_ProteinInference... Generating docs for page TOPP_ProteinQuantifier... Generating docs for page TOPP_ProteinResolver... Generating docs for page TOPP_PTModel... Generating docs for page TOPP_PTPredict... Generating docs for page TOPP_QualityControl... Generating docs for page TOPP_Resampler... Generating docs for page TOPP_RTModel... Generating docs for page TOPP_RTPredict... Generating docs for page TOPP_SeedListGenerator... Generating docs for page TOPP_SpecLibSearcher... Generating docs for page TOPP_SpectraFilterBernNorm... Generating docs for page TOPP_SpectraFilterMarkerMower... Generating docs for page TOPP_SpectraFilterNLargest... Generating docs for page TOPP_SpectraFilterNormalizer... Generating docs for page TOPP_SpectraFilterParentPeakMower... Generating docs for page TOPP_SpectraFilterScaler... Generating docs for page TOPP_SpectraFilterSqrtMower... Generating docs for page TOPP_SpectraFilterThresholdMower... Generating docs for page TOPP_SpectraFilterWindowMower... Generating docs for page TOPP_SpectraMerger... Generating docs for page TOPP_TextExporter... Generating docs for page TOPP_TOFCalibration... Generating docs for page TOPP_XFDR... Generating docs for page TOPP_XTandemAdapter... Generating docs for page UTILS_AccurateMassSearch... Generating docs for page UTILS_AssayGeneratorMetabo... Generating docs for page UTILS_ClusterMassTraces... Generating docs for page UTILS_ClusterMassTracesByPrecursor... Generating docs for page UTILS_CVInspector... Generating docs for page UTILS_DatabaseFilter... Generating docs for page UTILS_DecoyDatabase... Generating docs for page UTILS_DeMeanderize... Generating docs for page UTILS_Digestor... Generating docs for page UTILS_DigestorMotif... Generating docs for page UTILS_Epifany... Generating docs for page UTILS_ERPairFinder... Generating docs for page UTILS_FeatureFinderMetaboIdent... Generating docs for page UTILS_FeatureFinderSuperHirn... Generating docs for page UTILS_FFEval... Generating docs for page UTILS_FuzzyDiff... Generating docs for page UTILS_IDDecoyProbability... Generating docs for page UTILS_IDExtractor... Generating docs for page UTILS_IDMassAccuracy... Generating docs for page UTILS_IDScoreSwitcher... Generating docs for page UTILS_IDSplitter... Generating docs for page UTILS_ImageCreator... Generating docs for page UTILS_INIUpdater... Generating docs for page UTILS_LabeledEval... Generating docs for page UTILS_MassCalculator... Generating docs for page UTILS_MetaboliteAdductDecharger... Generating docs for page UTILS_MetaboliteSpectralMatcher... Generating docs for page UTILS_MetaProSIP... Generating docs for page UTILS_MRMPairFinder... Generating docs for page UTILS_MRMTransitionGroupPicker... Generating docs for page UTILS_MSFraggerAdapter... Generating docs for page UTILS_MSSimulator... Generating docs for page UTILS_MSstatsConverter... Generating docs for page UTILS_MultiplexResolver... Generating docs for page UTILS_MzMLSplitter... Generating docs for page UTILS_NovorAdapter... Generating docs for page UTILS_NucleicAcidSearchEngine... Generating docs for page UTILS_OpenSwathDIAPreScoring... Generating docs for page UTILS_OpenSwathFileSplitter... Generating docs for page UTILS_OpenSwathMzMLFileCacher... Generating docs for page UTILS_OpenSwathRewriteToFeatureXML... Generating docs for page UTILS_OpenSwathWorkflow... Generating docs for page UTILS_PeakPickerIterative... Generating docs for page UTILS_ProteomicsLFQ... Generating docs for page UTILS_PSMFeatureExtractor... Generating docs for page UTILS_QCCalculator... Generating docs for page UTILS_QCEmbedder... Generating docs for page UTILS_QCExporter... Generating docs for page UTILS_QCExtractor... Generating docs for page UTILS_QCImporter... Generating docs for page UTILS_QCMerger... Generating docs for page UTILS_QCShrinker... Generating docs for page UTILS_RNADigestor... Generating docs for page UTILS_RNAMassCalculator... Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluatioFontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories n... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating docs for page improvement... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group SpectrumWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 14 parallel threads... 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writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories 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directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ning dot for graph 43/224 Running dot for graph 44/224 Running dot for graph 45/224 Running dot for graph 46/224 Running dot for graph 47/224 Running dot for graph 48/224 Running dot for graph 49/224 Running dot for graph 50/224 Running dot for graph 51/224 Running dot for graph 52/224 Running dot for graph 53/224 Running dot for graph 54/224 Running dot for graph 55/224 Running dot for graph 56/224 Running dot for graph 57/224 Running dot for graph 58/224 Running dot for graph 59/224 Running dot for graph 60/224 Running dot for graph 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error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories graph 181/224 Running dot for graph 182/224 Running dot for graph 183/224 Running dot for graph 184/224 Running dot for graph 185/224 Running dot for graph 186/224 Running dot for graph 187/224 Running dot for graph 188/224 Running dot for graph 189/224 Running dot for graph 190/224 Running dot for graph 191/224 Running dot for graph 192/224 Running dot for graph 193/224 Running dot for graph 194/224 Running dot for graph 195/224 Running dot for graph 196/224 Running dot for graph 197/224 Running dot for graph 198/224 Running dot for graph 199/224 Running dot for graph 200/224 Running dot for graph 201/224 Running dot for graph 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Patching output file 394/440 Patching output file 395/440 Patching output file 396/440 Patching output file 397/440 Patching output file 398/440 Patching output file 399/440 Patching output file 400/440 Patching output file 401/440 Patching output file 402/440 Patching output file 403/440 Patching output file 404/440 Patching output file 405/440 Patching output file 406/440 Patching output file 407/440 Patching output file 408/440 Patching output file 409/440 Patching output file 410/440 Patching output file 411/440 Patching output file 412/440 Patching output file 413/440 Patching output file 414/440 Patching output file 415/440 Patching output file 416/440 Patching output file 417/440 Patching output file 418/440 Patching output file 419/440 Patching output file 420/440 Patching output file 421/440 Patching output file 422/440 Patching output file 423/440 Patching output file 424/440 Patching output file 425/440 Patching output file 426/440 Patching output file 427/440 Patching output file 428/440 Patching output file 429/440 Patching output file 430/440 Patching output file 431/440 Patching output file 432/440 Patching output file 433/440 Patching output file 434/440 Patching output file 435/440 Patching output file 436/440 Patching output file 437/440 Patching output file 438/440 Patching output file 439/440 Patching output file 440/440 type lookup cache used 62166/65536 hits=240509 misses=62324 symbol lookup cache used 29239/65536 hits=195776 misses=29239 finished... cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy /build/reproducible-path/openms-2.6.0+cleaned1/doc/index.html index.html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The documentation has been successfully created." The documentation has been successfully created. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[5]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target doc_minimal make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' # Run the test suite # VERBOSE=1 /usr/bin/make -C /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu test # Prepare the topp.1 man page with all the one-line description got # from calling individually each program in /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin with # --help switch. The newly built libs need be in the path so that the # binaries can execute. Same for the shared data path, because the # binaries need it to run. Note the calling in sh ./ with the script # shell being itself executable, otherwise git-buildpackage would # fail. cd /build/reproducible-path/openms-2.6.0+cleaned1/debian && \ PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ sh ./binaries-extract-one-line-man-desc.sh /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin /build/reproducible-path/openms-2.6.0+cleaned1/debian ./binaries-extract-one-line-man-desc.sh: 6: cd: can't cd to /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin #VERBOSE=1 LD_LIBRARY_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/i386-linux-gnu:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/lib/i386-linux-gnu:/usr/lib/libeatmydata\ #PATH=/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/bin:/build/reproducible-path/openms-2.6.0+cleaned1/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games\ #OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ #cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/doc/doxygen && doxygen Doxyfile # There are two files that we do not want to ship because # they exist in their own Debian packages. rm -f /build/reproducible-path/openms-2.6.0+cleaned1/obj-i386-linux-gnu/usr/share/doc/html/jquery.js make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/libopenms-dev.debhelper.log debian/libopenms2.6.0.debhelper.log debian/openms-common.debhelper.log debian/openms-doc.debhelper.log debian/openms.debhelper.log debian/topp.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' make[1]: 'override_dh_auto_test' is up to date. make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake --no-parallel dh_testroot -O--buildsystem=cmake -O--no-parallel dh_prep -O--buildsystem=cmake -O--no-parallel rm -f -- debian/libopenms2.6.0.substvars debian/libopenms-dev.substvars debian/topp.substvars debian/openms-common.substvars debian/openms-doc.substvars debian/openms.substvars rm -fr -- debian/.debhelper/generated/libopenms2.6.0/ debian/libopenms2.6.0/ debian/tmp/ debian/.debhelper/generated/libopenms-dev/ debian/libopenms-dev/ debian/.debhelper/generated/topp/ debian/topp/ debian/.debhelper/generated/openms-common/ debian/openms-common/ debian/.debhelper/generated/openms-doc/ debian/openms-doc/ debian/.debhelper/generated/openms/ debian/openms/ dh_installdirs -O--buildsystem=cmake -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1' VERBOSE=1 \ OPENMS_DATA_PATH=/build/reproducible-path/openms-2.6.0+cleaned1/share/OpenMS/ \ dh_auto_install install -m0755 -d /build/reproducible-path/openms-2.6.0\+cleaned1/debian/tmp cd obj-i686-linux-gnu && make -j1 install DESTDIR=/build/reproducible-path/openms-2.6.0\+cleaned1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openms-2.6.0+cleaned1 -B/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenSwathAlgo make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build.make src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen_timestamp_deps make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 1%] Built target OpenMS_autogen make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms/CMakeFiles/OpenMS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 53%] Built target OpenMS make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/CMakeFiles/SuperHirn.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/superhirn/CMakeFiles/SuperHirn.dir/build.make src/superhirn/CMakeFiles/SuperHirn.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/superhirn/CMakeFiles/SuperHirn.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target SuperHirn make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target OpenMS_GUI_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 55%] Built target OpenMS_GUI_autogen make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/OpenMS_GUI.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target OpenMS_GUI make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/INIFileEditor_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor_autogen make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/INIFileEditor.dir/INIFileEditor_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/INIFileEditor.dir/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/INIFileEditor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target INIFileEditor make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/INIFileEditor.dir/build.make src/openms_gui/CMakeFiles/INIFileEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/INIFileEditor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target INIFileEditor make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/SwathWizard_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build.make src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard_autogen make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/SwathWizard.dir/SwathWizard_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/SwathWizard.dir/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/SwathWizard.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target SwathWizard make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/SwathWizard.dir/build.make src/openms_gui/CMakeFiles/SwathWizard.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/SwathWizard.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target SwathWizard make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target TOPPAS_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPAS_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 66%] Built target TOPPAS_autogen make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/TOPPAS.dir/TOPPAS_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/TOPPAS.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPAS.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPAS make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPAS.dir/build.make src/openms_gui/CMakeFiles/TOPPAS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPAS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPAS make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen_timestamp_deps.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView_autogen_timestamp_deps make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/TOPPView_autogen/deps" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView_autogen.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView_autogen make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build.make src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView_autogen.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView_autogen make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/DependInfo.cmake "--color=" Dependencies file "src/openms_gui/CMakeFiles/TOPPView.dir/TOPPView_autogen/mocs_compilation.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Dependencies file "src/openms_gui/CMakeFiles/TOPPView.dir/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp.o.d" is newer than depends file "/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/CMakeFiles/TOPPView.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target TOPPView make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/openms_gui/CMakeFiles/TOPPView.dir/build.make src/openms_gui/CMakeFiles/TOPPView.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/openms_gui/CMakeFiles/TOPPView.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target TOPPView make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/BaselineFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/BaselineFilter.dir/build.make src/topp/CMakeFiles/BaselineFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/BaselineFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 67%] Built target BaselineFilter make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CometAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CometAdapter.dir/build.make src/topp/CMakeFiles/CometAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CometAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CometAdapter make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovo.dir/build.make src/topp/CMakeFiles/CompNovo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CompNovo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CompNovo make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CompNovoCID.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CompNovoCID.dir/build.make src/topp/CMakeFiles/CompNovoCID.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CompNovoCID.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CompNovoCID make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusID.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusID.dir/build.make src/topp/CMakeFiles/ConsensusID.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusID.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ConsensusID make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ConsensusMapNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build.make src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ConsensusMapNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ConsensusMapNormalizer make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/CruxAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/CruxAdapter.dir/build.make src/topp/CMakeFiles/CruxAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/CruxAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target CruxAdapter make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DatabaseSuitability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DatabaseSuitability.dir/build.make src/topp/CMakeFiles/DatabaseSuitability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/DatabaseSuitability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target DatabaseSuitability make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Decharger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Decharger.dir/build.make src/topp/CMakeFiles/Decharger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/Decharger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target Decharger make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/DTAExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/DTAExtractor.dir/build.make src/topp/CMakeFiles/DTAExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/DTAExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target DTAExtractor make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/EICExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/EICExtractor.dir/build.make src/topp/CMakeFiles/EICExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/EICExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target EICExtractor make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExternalCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExternalCalibration.dir/build.make src/topp/CMakeFiles/ExternalCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ExternalCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target ExternalCalibration make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FalseDiscoveryRate.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FalseDiscoveryRate.dir/build.make src/topp/CMakeFiles/FalseDiscoveryRate.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FalseDiscoveryRate.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FalseDiscoveryRate make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderCentroided.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderCentroided.dir/build.make src/topp/CMakeFiles/FeatureFinderCentroided.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderCentroided.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderCentroided make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIdentification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIdentification.dir/build.make src/topp/CMakeFiles/FeatureFinderIdentification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIdentification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderIdentification make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build.make src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderIsotopeWavelet.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderIsotopeWavelet make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMetabo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMetabo.dir/build.make src/topp/CMakeFiles/FeatureFinderMetabo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMetabo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMetabo make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMRM.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMRM.dir/build.make src/topp/CMakeFiles/FeatureFinderMRM.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMRM.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMRM make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureFinderMultiplex.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build.make src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureFinderMultiplex.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureFinderMultiplex make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerLabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerLabeled.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerLabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeled.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerUnlabeled make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledKD.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 68%] Built target FeatureLinkerUnlabeledKD make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build.make src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FeatureLinkerUnlabeledQT.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FeatureLinkerUnlabeledQT make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FidoAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FidoAdapter.dir/build.make src/topp/CMakeFiles/FidoAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FidoAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FidoAdapter make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileConverter.dir/build.make src/topp/CMakeFiles/FileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileConverter make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileFilter.dir/build.make src/topp/CMakeFiles/FileFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileFilter make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileInfo.dir/build.make src/topp/CMakeFiles/FileInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileInfo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileInfo make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/FileMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/FileMerger.dir/build.make src/topp/CMakeFiles/FileMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/FileMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target FileMerger make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GenericWrapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GenericWrapper.dir/build.make src/topp/CMakeFiles/GenericWrapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/GenericWrapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 69%] Built target GenericWrapper make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/GNPSExport.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/GNPSExport.dir/build.make src/topp/CMakeFiles/GNPSExport.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/GNPSExport.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target GNPSExport make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/HighResPrecursorMassCorrector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target HighResPrecursorMassCorrector make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDConflictResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDConflictResolver.dir/build.make src/topp/CMakeFiles/IDConflictResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDConflictResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 70%] Built target IDConflictResolver make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFileConverter.dir/build.make src/topp/CMakeFiles/IDFileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDFileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDFileConverter make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDFilter.dir/build.make src/topp/CMakeFiles/IDFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDFilter make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMapper.dir/build.make src/topp/CMakeFiles/IDMapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDMapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDMapper make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDMerger.dir/build.make src/topp/CMakeFiles/IDMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDMerger make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build.make src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDPosteriorErrorProbability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 71%] Built target IDPosteriorErrorProbability make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRipper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRipper.dir/build.make src/topp/CMakeFiles/IDRipper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDRipper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IDRipper make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IDRTCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IDRTCalibration.dir/build.make src/topp/CMakeFiles/IDRTCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IDRTCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IDRTCalibration make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InclusionExclusionListCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build.make src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InclusionExclusionListCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InclusionExclusionListCreator make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InspectAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InspectAdapter.dir/build.make src/topp/CMakeFiles/InspectAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InspectAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InspectAdapter make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/InternalCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/InternalCalibration.dir/build.make src/topp/CMakeFiles/InternalCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/InternalCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target InternalCalibration make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/IsobaricAnalyzer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/IsobaricAnalyzer.dir/build.make src/topp/CMakeFiles/IsobaricAnalyzer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/IsobaricAnalyzer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target IsobaricAnalyzer make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/LuciphorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/LuciphorAdapter.dir/build.make src/topp/CMakeFiles/LuciphorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/LuciphorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target LuciphorAdapter make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerIdentification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerIdentification.dir/build.make src/topp/CMakeFiles/MapAlignerIdentification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerIdentification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerIdentification make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerPoseClustering.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build.make src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerPoseClustering.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerPoseClustering make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerSpectrum.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerSpectrum.dir/build.make src/topp/CMakeFiles/MapAlignerSpectrum.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerSpectrum.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerSpectrum make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapAlignerTreeGuided.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build.make src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapAlignerTreeGuided.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapAlignerTreeGuided make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapNormalizer.dir/build.make src/topp/CMakeFiles/MapNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 72%] Built target MapNormalizer make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapRTTransformer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapRTTransformer.dir/build.make src/topp/CMakeFiles/MapRTTransformer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapRTTransformer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MapRTTransformer make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MapStatistics.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MapStatistics.dir/build.make src/topp/CMakeFiles/MapStatistics.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MapStatistics.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MapStatistics make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MaRaClusterAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MaRaClusterAdapter.dir/build.make src/topp/CMakeFiles/MaRaClusterAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MaRaClusterAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MaRaClusterAdapter make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapter.dir/build.make src/topp/CMakeFiles/MascotAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MascotAdapter make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MascotAdapterOnline.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MascotAdapterOnline.dir/build.make src/topp/CMakeFiles/MascotAdapterOnline.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MascotAdapterOnline.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MascotAdapterOnline make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MassTraceExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MassTraceExtractor.dir/build.make src/topp/CMakeFiles/MassTraceExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MassTraceExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 73%] Built target MassTraceExtractor make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MRMMapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MRMMapper.dir/build.make src/topp/CMakeFiles/MRMMapper.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MRMMapper.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MRMMapper make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MSGFPlusAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MSGFPlusAdapter.dir/build.make src/topp/CMakeFiles/MSGFPlusAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MSGFPlusAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MSGFPlusAdapter make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MyriMatchAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MyriMatchAdapter.dir/build.make src/topp/CMakeFiles/MyriMatchAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MyriMatchAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MyriMatchAdapter make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/MzTabExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/MzTabExporter.dir/build.make src/topp/CMakeFiles/MzTabExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/MzTabExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 74%] Built target MzTabExporter make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterGaussian.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterGaussian.dir/build.make src/topp/CMakeFiles/NoiseFilterGaussian.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterGaussian.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target NoiseFilterGaussian make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/NoiseFilterSGolay.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/NoiseFilterSGolay.dir/build.make src/topp/CMakeFiles/NoiseFilterSGolay.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/NoiseFilterSGolay.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target NoiseFilterSGolay make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OMSSAAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OMSSAAdapter.dir/build.make src/topp/CMakeFiles/OMSSAAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OMSSAAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OMSSAAdapter make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXL.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXL.dir/build.make src/topp/CMakeFiles/OpenPepXL.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXL.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenPepXL make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenPepXLLF.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenPepXLLF.dir/build.make src/topp/CMakeFiles/OpenPepXLLF.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenPepXLLF.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenPepXLLF make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAnalyzer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build.make src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAnalyzer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenSwathAnalyzer make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathAssayGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 75%] Built target OpenSwathAssayGenerator make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build.make src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathChromatogramExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathChromatogramExtractor make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build.make src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathConfidenceScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathConfidenceScoring make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build.make src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathDecoyGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathDecoyGenerator make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build.make src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathFeatureXMLToTSV.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 76%] Built target OpenSwathFeatureXMLToTSV make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build.make src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/OpenSwathRTNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 77%] Built target OpenSwathRTNormalizer make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerHiRes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerHiRes.dir/build.make src/topp/CMakeFiles/PeakPickerHiRes.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerHiRes.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeakPickerHiRes make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeakPickerWavelet.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeakPickerWavelet.dir/build.make src/topp/CMakeFiles/PeakPickerWavelet.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeakPickerWavelet.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeakPickerWavelet make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PepNovoAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PepNovoAdapter.dir/build.make src/topp/CMakeFiles/PepNovoAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PepNovoAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PepNovoAdapter make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PeptideIndexer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PeptideIndexer.dir/build.make src/topp/CMakeFiles/PeptideIndexer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PeptideIndexer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PeptideIndexer make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PercolatorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PercolatorAdapter.dir/build.make src/topp/CMakeFiles/PercolatorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PercolatorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PercolatorAdapter make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PhosphoScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PhosphoScoring.dir/build.make src/topp/CMakeFiles/PhosphoScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PhosphoScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 78%] Built target PhosphoScoring make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorIonSelector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorIonSelector.dir/build.make src/topp/CMakeFiles/PrecursorIonSelector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorIonSelector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PrecursorIonSelector make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PrecursorMassCorrector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PrecursorMassCorrector.dir/build.make src/topp/CMakeFiles/PrecursorMassCorrector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PrecursorMassCorrector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PrecursorMassCorrector make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinInference.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinInference.dir/build.make src/topp/CMakeFiles/ProteinInference.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinInference.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinInference make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinQuantifier.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinQuantifier.dir/build.make src/topp/CMakeFiles/ProteinQuantifier.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinQuantifier.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinQuantifier make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ProteinResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ProteinResolver.dir/build.make src/topp/CMakeFiles/ProteinResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ProteinResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target ProteinResolver make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTModel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTModel.dir/build.make src/topp/CMakeFiles/PTModel.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PTModel.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PTModel make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/PTPredict.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/PTPredict.dir/build.make src/topp/CMakeFiles/PTPredict.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/PTPredict.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 79%] Built target PTPredict make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/QualityControl.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/QualityControl.dir/build.make src/topp/CMakeFiles/QualityControl.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/QualityControl.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target QualityControl make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTModel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTModel.dir/build.make src/topp/CMakeFiles/RTModel.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/RTModel.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 80%] Built target RTModel make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/RTPredict.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/RTPredict.dir/build.make src/topp/CMakeFiles/RTPredict.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/RTPredict.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target RTPredict make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SeedListGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SeedListGenerator.dir/build.make src/topp/CMakeFiles/SeedListGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SeedListGenerator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SeedListGenerator make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpecLibSearcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpecLibSearcher.dir/build.make src/topp/CMakeFiles/SpecLibSearcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpecLibSearcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpecLibSearcher make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterBernNorm.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build.make src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterBernNorm.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterBernNorm make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build.make src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterMarkerMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterMarkerMower make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNLargest.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNLargest.dir/build.make src/topp/CMakeFiles/SpectraFilterNLargest.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNLargest.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterNLargest make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterNormalizer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build.make src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterNormalizer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 81%] Built target SpectraFilterNormalizer make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build.make src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterParentPeakMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterParentPeakMower make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterScaler.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterScaler.dir/build.make src/topp/CMakeFiles/SpectraFilterScaler.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterScaler.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterScaler make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build.make src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterSqrtMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterSqrtMower make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build.make src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterThresholdMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterThresholdMower make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraFilterWindowMower.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build.make src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraFilterWindowMower.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraFilterWindowMower make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/SpectraMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/SpectraMerger.dir/build.make src/topp/CMakeFiles/SpectraMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/SpectraMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 82%] Built target SpectraMerger make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TextExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TextExporter.dir/build.make src/topp/CMakeFiles/TextExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TextExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target TextExporter make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOFCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOFCalibration.dir/build.make src/topp/CMakeFiles/TOFCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TOFCalibration.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 83%] Built target TOFCalibration make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XFDR.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XFDR.dir/build.make src/topp/CMakeFiles/XFDR.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/XFDR.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target XFDR make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/XTandemAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/XTandemAdapter.dir/build.make src/topp/CMakeFiles/XTandemAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/XTandemAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target XTandemAdapter make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/ExecutePipeline.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/ExecutePipeline.dir/build.make src/topp/CMakeFiles/ExecutePipeline.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/ExecutePipeline.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ExecutePipeline make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/Resampler.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/Resampler.dir/build.make src/topp/CMakeFiles/Resampler.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/Resampler.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target Resampler make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AccurateMassSearch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AccurateMassSearch.dir/build.make src/utils/CMakeFiles/AccurateMassSearch.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/AccurateMassSearch.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AccurateMassSearch make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/AssayGeneratorMetabo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build.make src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/AssayGeneratorMetabo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target AssayGeneratorMetabo make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTraces.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTraces.dir/build.make src/utils/CMakeFiles/ClusterMassTraces.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTraces.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTraces make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build.make src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ClusterMassTracesByPrecursor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target ClusterMassTracesByPrecursor make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/CVInspector.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/CVInspector.dir/build.make src/utils/CMakeFiles/CVInspector.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/CVInspector.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 84%] Built target CVInspector make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DatabaseFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DatabaseFilter.dir/build.make src/utils/CMakeFiles/DatabaseFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DatabaseFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DatabaseFilter make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DecoyDatabase.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DecoyDatabase.dir/build.make src/utils/CMakeFiles/DecoyDatabase.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DecoyDatabase.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DecoyDatabase make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DeMeanderize.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DeMeanderize.dir/build.make src/utils/CMakeFiles/DeMeanderize.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DeMeanderize.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 85%] Built target DeMeanderize make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Digestor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Digestor.dir/build.make src/utils/CMakeFiles/Digestor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/Digestor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Digestor make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/DigestorMotif.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/DigestorMotif.dir/build.make src/utils/CMakeFiles/DigestorMotif.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/DigestorMotif.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target DigestorMotif make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/Epifany.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/Epifany.dir/build.make src/utils/CMakeFiles/Epifany.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/Epifany.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target Epifany make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ERPairFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ERPairFinder.dir/build.make src/utils/CMakeFiles/ERPairFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ERPairFinder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 86%] Built target ERPairFinder make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build.make src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderMetaboIdent.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target FeatureFinderMetaboIdent make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build.make src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FeatureFinderSuperHirn.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 87%] Built target FeatureFinderSuperHirn make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FFEval.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FFEval.dir/build.make src/utils/CMakeFiles/FFEval.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FFEval.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FFEval make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/FuzzyDiff.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/FuzzyDiff.dir/build.make src/utils/CMakeFiles/FuzzyDiff.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/FuzzyDiff.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target FuzzyDiff make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDDecoyProbability.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDDecoyProbability.dir/build.make src/utils/CMakeFiles/IDDecoyProbability.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDDecoyProbability.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDDecoyProbability make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDExtractor.dir/build.make src/utils/CMakeFiles/IDExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDExtractor make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDMassAccuracy.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDMassAccuracy.dir/build.make src/utils/CMakeFiles/IDMassAccuracy.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDMassAccuracy.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDMassAccuracy make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDScoreSwitcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDScoreSwitcher.dir/build.make src/utils/CMakeFiles/IDScoreSwitcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDScoreSwitcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDScoreSwitcher make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/IDSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/IDSplitter.dir/build.make src/utils/CMakeFiles/IDSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/IDSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target IDSplitter make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/LabeledEval.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/LabeledEval.dir/build.make src/utils/CMakeFiles/LabeledEval.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/LabeledEval.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target LabeledEval make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MassCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MassCalculator.dir/build.make src/utils/CMakeFiles/MassCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MassCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 88%] Built target MassCalculator make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build.make src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteAdductDecharger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaboliteAdductDecharger make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build.make src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaboliteSpectralMatcher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaboliteSpectralMatcher make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MetaProSIP.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MetaProSIP.dir/build.make src/utils/CMakeFiles/MetaProSIP.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MetaProSIP.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MetaProSIP make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMPairFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMPairFinder.dir/build.make src/utils/CMakeFiles/MRMPairFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MRMPairFinder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MRMPairFinder make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSFraggerAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSFraggerAdapter.dir/build.make src/utils/CMakeFiles/MSFraggerAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSFraggerAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSFraggerAdapter make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSSimulator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSSimulator.dir/build.make src/utils/CMakeFiles/MSSimulator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSSimulator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 89%] Built target MSSimulator make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MSstatsConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MSstatsConverter.dir/build.make src/utils/CMakeFiles/MSstatsConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MSstatsConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MSstatsConverter make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MultiplexResolver.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MultiplexResolver.dir/build.make src/utils/CMakeFiles/MultiplexResolver.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MultiplexResolver.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MultiplexResolver make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MzMLSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MzMLSplitter.dir/build.make src/utils/CMakeFiles/MzMLSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MzMLSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target MzMLSplitter make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NovorAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NovorAdapter.dir/build.make src/utils/CMakeFiles/NovorAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/NovorAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NovorAdapter make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build.make src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/NucleicAcidSearchEngine.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target NucleicAcidSearchEngine make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenMSInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenMSInfo.dir/build.make src/utils/CMakeFiles/OpenMSInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenMSInfo.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target OpenMSInfo make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PeakPickerIterative.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PeakPickerIterative.dir/build.make src/utils/CMakeFiles/PeakPickerIterative.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/PeakPickerIterative.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target PeakPickerIterative make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/PSMFeatureExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/PSMFeatureExtractor.dir/build.make src/utils/CMakeFiles/PSMFeatureExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/PSMFeatureExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target PSMFeatureExtractor make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCCalculator.dir/build.make src/utils/CMakeFiles/QCCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 90%] Built target QCCalculator make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCEmbedder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCEmbedder.dir/build.make src/utils/CMakeFiles/QCEmbedder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCEmbedder.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCEmbedder make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExporter.dir/build.make src/utils/CMakeFiles/QCExporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCExporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCExporter make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCExtractor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCExtractor.dir/build.make src/utils/CMakeFiles/QCExtractor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCExtractor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCExtractor make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCImporter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCImporter.dir/build.make src/utils/CMakeFiles/QCImporter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCImporter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCImporter make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCMerger.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCMerger.dir/build.make src/utils/CMakeFiles/QCMerger.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCMerger.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCMerger make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/QCShrinker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/QCShrinker.dir/build.make src/utils/CMakeFiles/QCShrinker.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/QCShrinker.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target QCShrinker make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ProteomicsLFQ.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ProteomicsLFQ.dir/build.make src/utils/CMakeFiles/ProteomicsLFQ.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ProteomicsLFQ.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target ProteomicsLFQ make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNADigestor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNADigestor.dir/build.make src/utils/CMakeFiles/RNADigestor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNADigestor.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNADigestor make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNAMassCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNAMassCalculator.dir/build.make src/utils/CMakeFiles/RNAMassCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNAMassCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNAMassCalculator make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlXICFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlXICFilter.dir/build.make src/utils/CMakeFiles/RNPxlXICFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlXICFilter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNPxlXICFilter make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RNPxlSearch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RNPxlSearch.dir/build.make src/utils/CMakeFiles/RNPxlSearch.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RNPxlSearch.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RNPxlSearch make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/RTEvaluation.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/RTEvaluation.dir/build.make src/utils/CMakeFiles/RTEvaluation.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/RTEvaluation.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target RTEvaluation make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SemanticValidator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SemanticValidator.dir/build.make src/utils/CMakeFiles/SemanticValidator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SemanticValidator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SemanticValidator make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SequenceCoverageCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build.make src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SequenceCoverageCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SequenceCoverageCalculator make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SimpleSearchEngine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SimpleSearchEngine.dir/build.make src/utils/CMakeFiles/SimpleSearchEngine.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SimpleSearchEngine.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SimpleSearchEngine make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SiriusAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SiriusAdapter.dir/build.make src/utils/CMakeFiles/SiriusAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SiriusAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 91%] Built target SiriusAdapter make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpecLibCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpecLibCreator.dir/build.make src/utils/CMakeFiles/SpecLibCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SpecLibCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target SpecLibCreator make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build.make src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SpectraSTSearchAdapter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 92%] Built target SpectraSTSearchAdapter make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/StaticModification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/StaticModification.dir/build.make src/utils/CMakeFiles/StaticModification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/StaticModification.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target StaticModification make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build.make src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/SvmTheoreticalSpectrumGeneratorTrainer.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target SvmTheoreticalSpectrumGeneratorTrainer make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TICCalculator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TICCalculator.dir/build.make src/utils/CMakeFiles/TICCalculator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TICCalculator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TICCalculator make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TransformationEvaluation.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TransformationEvaluation.dir/build.make src/utils/CMakeFiles/TransformationEvaluation.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TransformationEvaluation.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TransformationEvaluation make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/XMLValidator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/XMLValidator.dir/build.make src/utils/CMakeFiles/XMLValidator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/XMLValidator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target XMLValidator make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/TargetedFileConverter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/TargetedFileConverter.dir/build.make src/utils/CMakeFiles/TargetedFileConverter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/TargetedFileConverter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target TargetedFileConverter make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build.make src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathDIAPreScoring.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathDIAPreScoring make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build.make src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathMzMLFileCacher.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathMzMLFileCacher make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathWorkflow.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathWorkflow.dir/build.make src/utils/CMakeFiles/OpenSwathWorkflow.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathWorkflow.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathWorkflow make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathFileSplitter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build.make src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathFileSplitter.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathFileSplitter make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build.make src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/OpenSwathRewriteToFeatureXML.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target OpenSwathRewriteToFeatureXML make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build.make src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/MRMTransitionGroupPicker.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 93%] Built target MRMTransitionGroupPicker make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/ImageCreator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/ImageCreator.dir/build.make src/utils/CMakeFiles/ImageCreator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/ImageCreator.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target ImageCreator make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/INIUpdater.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/INIUpdater.dir/build.make src/utils/CMakeFiles/INIUpdater.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/INIUpdater.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target INIUpdater make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/utils/CMakeFiles/UTILS.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/utils/CMakeFiles/UTILS.dir/build.make src/utils/CMakeFiles/UTILS.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/utils/CMakeFiles/UTILS.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target UTILS make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/topp/CMakeFiles/TOPP.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f src/topp/CMakeFiles/TOPP.dir/build.make src/topp/CMakeFiles/TOPP.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[4]: Nothing to be done for 'src/topp/CMakeFiles/TOPP.dir/build'. make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target TOPP make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_minimal.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_minimal.dir/build.make doc/CMakeFiles/doc_minimal.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Build the doxygen documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating html documentation without class/TOPP/UTILS documentation" Creating html documentation without class/TOPP/UTILS documentation cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory html cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /usr/bin/doxygen doxygen/Doxyfile_noclass warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 115 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 284 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1147 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1283 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1575 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1877 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1893 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1967 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2072 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2260 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2302 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2309 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2533 of file 'doxygen/Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! Doxygen version used: 1.9.8 Searching for include files... Searching for example files... 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Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-macs.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/doc/doxygen/install/install-win.doxygen... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/SwathWizard.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/SwathWizardBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/BaselineFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CometAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CompNovoCID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusID.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/CruxAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DatabaseSuitability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Decharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/DTAExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/EICExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExecutePipeline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ExternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FalseDiscoveryRate.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderCentroided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMRM.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerBase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FidoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/FileMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GenericWrapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/GNPSExport.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDConflictResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRipper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IDRTCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InspectAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/InternalCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/IsobaricAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/LuciphorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerIdentification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerSpectrum.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapRTTransformer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MapStatistics.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MaRaClusterAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MascotAdapterOnline.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MassTraceExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MRMMapper.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MSGFPlusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MyriMatchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/MzTabExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterGaussian.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/NoiseFilterSGolay.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OMSSAAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXL.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenPepXLLF.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerHiRes.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeakPickerWavelet.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PepNovoAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PeptideIndexer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PercolatorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PhosphoScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorIonSelector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PrecursorMassCorrector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinInference.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinQuantifier.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/ProteinResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/PTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/QualityControl.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/Resampler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTModel.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/RTPredict.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SeedListGenerator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpecLibSearcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNLargest.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterScaler.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/SpectraMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TextExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/TOFCalibration.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XFDR.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/topp/XTandemAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AccurateMassSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTraces.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/CVInspector.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DatabaseFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DecoyDatabase.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DeMeanderize.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Digestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/DigestorMotif.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/Epifany.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ERPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FFEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/FuzzyDiff.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDDecoyProbability.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDMassAccuracy.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDScoreSwitcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/IDSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ImageCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/INIUpdater.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/LabeledEval.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MetaProSIP.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMPairFinder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSFraggerAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSSimulator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MSstatsConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MultiplexResolver.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/MzMLSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NovorAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenMSInfo.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/OpenSwathWorkflow.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PeakPickerIterative.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/ProteomicsLFQ.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/PSMFeatureExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCEmbedder.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCExtractor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCImporter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCMerger.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/QCShrinker.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNADigestor.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNAMassCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlSearch.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RNPxlXICFilter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/RTEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SemanticValidator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SimpleSearchEngine.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SiriusAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpecLibCreator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/StaticModification.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TargetedFileConverter.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TICCalculator.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/TransformationEvaluation.cpp... Preprocessing /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Parsing file /build/reproducible-path/openms-2.6.0+cleaned1/src/utils/XMLValidator.cpp... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Searching for tag less structs... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating images for formulas in HTML... Generating image form_0.png for formula Generating image form_1.png for formula Generating image form_2.png for formula Generating image form_3.png for formula Generating image form_4.png for formula Generating image form_5.png for formula Generating image form_6.png for formula Generating image form_7.png for formula Generating image form_8.png for formula Generating image form_9.png for formula Generating image form_0_dark.png for formula Generating image form_1_dark.png for formula Generating image form_2_dark.png for formula Generating image form_3_dark.png for formula Generating image form_4_dark.png for formula Generating image form_5_dark.png for formula Generating image form_6_dark.png for formula Generating image form_7_dark.png for formula Generating image form_8_dark.png for formula Generating image form_9_dark.png for formula Generating example documentation... Generating file sources... Parsing code for file common-cmake-parameters.doxygen... Parsing code for file install-linux-bin.doxygen... Parsing code for file install-linux.doxygen... Parsing code for file install-macs-bin.doxygen... Parsing code for file install-macs.doxygen... Parsing code for file install-win-bin.doxygen... Parsing code for file install-win.doxygen... Parsing code for file Changelog.doxygen... Parsing code for file ExternalCode.doxygen... Parsing code for file FAQ.doxygen... Parsing code for file KnownDevBugs.doxygen... Parsing code for file Main.doxygen... Parsing code for file Modules.doxygen... Parsing code for file OpenMS_Tutorial_html.doxygen... Parsing code for file PyOpenMS.doxygen... Parsing code for file QuickStart.doxygen... Parsing code for file TOPP.doxygen... Parsing code for file TOPP_Tutorial_html.doxygen... Parsing code for file UTILS.doxygen... Parsing code for file OpenMS_Tutorial.doxygen... Parsing code for file TOPP_advanced.doxygen... Parsing code for file TOPP_concepts.doxygen... Parsing code for file TOPP_scripting.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPAS.doxygen... Parsing code for file TOPPView_calling_topp.doxygen... Parsing code for file TOPPView_interface.doxygen... Parsing code for file INIFileEditor.cpp... Parsing code for file SwathWizard.cpp... Parsing code for file TOPPAS.cpp... Parsing code for file TOPPView.cpp... Parsing code for file INIFileEditorWindow.cpp... Parsing code for file QApplicationTOPP.cpp... Parsing code for file SwathWizardBase.cpp... Parsing code for file TOPPASBase.cpp... Parsing code for file TOPPViewBase.cpp... Parsing code for file BaselineFilter.cpp... Parsing code for file CometAdapter.cpp... Parsing code for file CompNovo.cpp... Parsing code for file CompNovoCID.cpp... Parsing code for file ConsensusID.cpp... Parsing code for file ConsensusMapNormalizer.cpp... Parsing code for file CruxAdapter.cpp... Parsing code for file DatabaseSuitability.cpp... Parsing code for file Decharger.cpp... Parsing code for file DTAExtractor.cpp... Parsing code for file EICExtractor.cpp... Parsing code for file ExecutePipeline.cpp... Parsing code for file ExternalCalibration.cpp... Parsing code for file FalseDiscoveryRate.cpp... Parsing code for file FeatureFinderCentroided.cpp... Parsing code for file FeatureFinderIdentification.cpp... Parsing code for file FeatureFinderIsotopeWavelet.cpp... Parsing code for file FeatureFinderMetabo.cpp... Parsing code for file FeatureFinderMRM.cpp... Parsing code for file FeatureFinderMultiplex.cpp... Generating code for file FeatureLinkerBase.cpp... Parsing code for file FeatureLinkerLabeled.cpp... Parsing code for file FeatureLinkerUnlabeled.cpp... Parsing code for file FeatureLinkerUnlabeledKD.cpp... Parsing code for file FeatureLinkerUnlabeledQT.cpp... Parsing code for file FidoAdapter.cpp... Parsing code for file FileConverter.cpp... Parsing code for file FileFilter.cpp... Parsing code for file FileInfo.cpp... Parsing code for file FileMerger.cpp... 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Parsing code for file MapRTTransformer.cpp... Parsing code for file MapStatistics.cpp... Parsing code for file MaRaClusterAdapter.cpp... Parsing code for file MascotAdapter.cpp... Parsing code for file MascotAdapterOnline.cpp... Parsing code for file MassTraceExtractor.cpp... Parsing code for file MRMMapper.cpp... Parsing code for file MSGFPlusAdapter.cpp... Parsing code for file MyriMatchAdapter.cpp... Parsing code for file MzTabExporter.cpp... Parsing code for file NoiseFilterGaussian.cpp... Parsing code for file NoiseFilterSGolay.cpp... Parsing code for file OMSSAAdapter.cpp... Parsing code for file OpenPepXL.cpp... Parsing code for file OpenPepXLLF.cpp... Parsing code for file OpenSwathAnalyzer.cpp... Parsing code for file OpenSwathAssayGenerator.cpp... Parsing code for file OpenSwathChromatogramExtractor.cpp... Parsing code for file OpenSwathConfidenceScoring.cpp... Parsing code for file OpenSwathDecoyGenerator.cpp... Parsing code for file OpenSwathFeatureXMLToTSV.cpp... 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Parsing code for file MSSimulator.cpp... Parsing code for file MSstatsConverter.cpp... Parsing code for file MultiplexResolver.cpp... Parsing code for file MzMLSplitter.cpp... Parsing code for file NovorAdapter.cpp... Parsing code for file NucleicAcidSearchEngine.cpp... Parsing code for file OpenMSInfo.cpp... Parsing code for file OpenSwathDIAPreScoring.cpp... Parsing code for file OpenSwathFileSplitter.cpp... Parsing code for file OpenSwathMzMLFileCacher.cpp... Parsing code for file OpenSwathRewriteToFeatureXML.cpp... Parsing code for file OpenSwathWorkflow.cpp... Parsing code for file PeakPickerIterative.cpp... Parsing code for file ProteomicsLFQ.cpp... Parsing code for file PSMFeatureExtractor.cpp... Parsing code for file QCCalculator.cpp... Parsing code for file QCEmbedder.cpp... Parsing code for file QCExporter.cpp... Parsing code for file QCExtractor.cpp... Parsing code for file QCImporter.cpp... Parsing code for file QCMerger.cpp... Parsing code for file QCShrinker.cpp... 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Generating docs for file MapAlignerIdentification.cpp... Generating docs for file MapAlignerPoseClustering.cpp... Generating docs for file MapAlignerSpectrum.cpp... Generating docs for file MapAlignerTreeGuided.cpp... Generating docs for file MapNormalizer.cpp... Generating docs for file MapRTTransformer.cpp... Generating docs for file MapStatistics.cpp... Generating docs for file MaRaClusterAdapter.cpp... Generating docs for file MascotAdapter.cpp... Generating docs for file MascotAdapterOnline.cpp... Generating docs for file MassTraceExtractor.cpp... Generating docs for file MRMMapper.cpp... Generating docs for file MSGFPlusAdapter.cpp... Generating docs for file MyriMatchAdapter.cpp... Generating docs for file MzTabExporter.cpp... Generating docs for file NoiseFilterGaussian.cpp... Generating docs for file NoiseFilterSGolay.cpp... Generating docs for file OMSSAAdapter.cpp... Generating docs for file OpenPepXL.cpp... Generating docs for file OpenPepXLLF.cpp... 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Generating docs for file XTandemAdapter.cpp... Generating docs for file AccurateMassSearch.cpp... Generating docs for file AssayGeneratorMetabo.cpp... Generating docs for file ClusterMassTraces.cpp... Generating docs for file ClusterMassTracesByPrecursor.cpp... Generating docs for file CVInspector.cpp... Generating docs for file DatabaseFilter.cpp... Generating docs for file DecoyDatabase.cpp... Generating docs for file DeMeanderize.cpp... Generating docs for file Digestor.cpp... Generating docs for file DigestorMotif.cpp... Generating docs for file Epifany.cpp... Generating docs for file ERPairFinder.cpp... Generating docs for file FeatureFinderMetaboIdent.cpp... Generating docs for file FeatureFinderSuperHirn.cpp... Generating docs for file FFEval.cpp... Generating docs for file FuzzyDiff.cpp... Generating docs for file IDDecoyProbability.cpp... Generating docs for file IDExtractor.cpp... Generating docs for file IDMassAccuracy.cpp... Generating docs for file IDScoreSwitcher.cpp... Generating docs for file IDSplitter.cpp... Generating docs for file ImageCreator.cpp... Generating docs for file INIUpdater.cpp... Generating docs for file LabeledEval.cpp... Generating docs for file MassCalculator.cpp... Generating docs for file MetaboliteAdductDecharger.cpp... Generating docs for file MetaboliteSpectralMatcher.cpp... Generating docs for file MetaProSIP.cpp... Generating docs for file MRMPairFinder.cpp... Generating docs for file MRMTransitionGroupPicker.cpp... Generating docs for file MSFraggerAdapter.cpp... Generating docs for file MSSimulator.cpp... Generating docs for file MSstatsConverter.cpp... Generating docs for file MultiplexResolver.cpp... Generating docs for file MzMLSplitter.cpp... Generating docs for file NovorAdapter.cpp... Generating docs for file NucleicAcidSearchEngine.cpp... Generating docs for file OpenMSInfo.cpp... Generating docs for file OpenSwathDIAPreScoring.cpp... Generating docs for file OpenSwathFileSplitter.cpp... Generating docs for file OpenSwathMzMLFileCacher.cpp... Generating docs for file OpenSwathRewriteToFeatureXML.cpp... Generating docs for file OpenSwathWorkflow.cpp... Generating docs for file PeakPickerIterative.cpp... Generating docs for file ProteomicsLFQ.cpp... Generating docs for file PSMFeatureExtractor.cpp... Generating docs for file QCCalculator.cpp... Generating docs for file QCEmbedder.cpp... Generating docs for file QCExporter.cpp... Generating docs for file QCExtractor.cpp... Generating docs for file QCImporter.cpp... Generating docs for file QCMerger.cpp... Generating docs for file QCShrinker.cpp... Generating docs for file RNADigestor.cpp... Generating docs for file RNAMassCalculator.cpp... Generating docs for file RNPxlSearch.cpp... Generating docs for file RNPxlXICFilter.cpp... Generating docs for file RTEvaluation.cpp... Generating docs for file SemanticValidator.cpp... Generating docs for file SequenceCoverageCalculator.cpp... Generating docs for file SimpleSearchEngine.cpp... Generating docs for file SiriusAdapter.cpp... Generating docs for file SpecLibCreator.cpp... Generating docs for file SpectraSTSearchAdapter.cpp... Generating docs for file StaticModification.cpp... Generating docs for file SvmTheoreticalSpectrumGeneratorTrainer.cpp... Generating docs for file TargetedFileConverter.cpp... Generating docs for file TICCalculator.cpp... Generating docs for file TransformationEvaluation.cpp... Generating docs for file XMLValidator.cpp... Generating page documentation... Generating docs for page tutorial... Generating docs for page TOPP_advanced... Generating docs for page TOPP_concepts... Generating docs for page TOPP_example_qualitycontrol... Generating docs for page TOPP_general... Generating docs for page TOPP_example_handling... Generating docs for page TOPP_example_signalprocessing... Generating docs for page TOPP_example_id... Generating docs for page TOPP_example_mapalignment... 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Generating docs for page UTILS_RNPxlSearch... Generating docs for page UTILS_RNPxlXICFilter... Generating docs for page UTILS_RTEvaluation... Generating docs for page UTILS_SemanticValidator... Generating docs for page UTILS_SequenceCoverageCalculator... Generating docs for page UTILS_SimpleSearchEngine... Generating docs for page UTILS_SiriusAdapter... Generating docs for page UTILS_SpecLibCreator... Generating docs for page UTILS_SpectraSTSearchAdapter... Generating docs for page UTILS_StaticModification... Generating docs for page UTILS_SvmTheoreticalSpectrumGeneratorTrainer... Generating docs for page UTILS_TargetedFileConverter... Generating docs for page UTILS_TICCalculator... Generating docs for page UTILS_TransformationEvaluation... Generating docs for page UTILS_XMLValidator... Generating docs for page todo... Generating docs for page experimental... Generating docs for page deprecated... Generating docs for page bug... Generating docs for page improvement... Generating group documentation... Generating dependency graph for group Math Generating dependency graph for group MathFunctionsStatistics Generating dependency graph for group MathFunctionsMisc Generating dependency graph for group Format Generating dependency graph for group FileIO Generating dependency graph for group Filtering Generating dependency graph for group SpectraPreprocessers Generating dependency graph for group SpectraFilter Generating dependency graph for group PeakMarker Generating dependency graph for group Analysis Generating dependency graph for group SignalProcessing Generating dependency graph for group PeakPicking Generating dependency graph for group FeatureFinder Generating dependency graph for group MapAlignment Generating dependency graph for group FeatureGrouping Generating dependency graph for group Analysis_ID Generating dependency graph for group SpectraClustering Generating dependency graph for group Visual Generating dependency graph for group SpectrumWidgets Generating dependency graph for group TOPPView_elements Generating dependency graph for group TOPPAS_elements Generating dependency graph for group Dialogs Generating class documentation... Generating docs for compound NucleicAcidSearchEngine... Generating docs for nested compound NucleicAcidSearchEngine::HasInvalidLength... Generating docs for nested compound NucleicAcidSearchEngine::PrecursorInfo... Generating docs for compound TOPPBase... Generating docs for compound TOPPGNPSExport... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace OpenMS Generating graph info page... Generating directory documentation... Generating dependency graph for directory doxygen Generating dependency graph for directory install Generating dependency graph for directory OpenMS_tutorial Generating dependency graph for directory public Generating dependency graph for directory TOPP_tutorial Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 14 parallel threads... 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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The documentation has been successfully created." The documentation has been successfully created. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "You can now open 'doc/index.html' in a web browser." You can now open 'doc/index.html' in a web browser. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off." We build only a minimal doc since OpenMS was configured without HAS_XSERVER=Off. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "If you want the full doc, either execute cmake --build . --target doc manually" If you want the full doc, either execute cmake --build . --target doc manually cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "or rerun cmake with -DHAS_XSERVER=On." or rerun cmake with -DHAS_XSERVER=On. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target doc_minimal make -f doc/CMakeFiles/doc_tutorials.dir/build.make doc/CMakeFiles/doc_tutorials.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/CMakeFiles/doc_tutorials.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/CMakeFiles/doc_tutorials.dir/build.make doc/CMakeFiles/doc_tutorials.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Build the OpenMS/TOPP pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating OpenMS pdf tutorial" Creating OpenMS pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory OpenMS_tutorial/latex_output cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir OpenMS_tutorial/ /usr/bin/doxygen Doxyfile warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1046 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1182 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1463 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1751 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1767 of file 'Doxyfile' has become obsolete. 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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on refman.pdf (32 pages, 402757 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir OpenMS_tutorial/latex_output/ /usr/bin/makeindex refman.idx This is makeindex, version 2.17 [TeX Live 2023] (kpathsea + Thai support). Scanning input file refman.idx....done (1 entries accepted, 0 rejected). Sorting entries...done (0 comparisons). Generating output file refman.ind....done (5 lines written, 0 warnings). Output written in refman.ind. 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Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy OpenMS_tutorial/latex_output/refman.pdf OpenMS_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The OpenMS tutorial in PDF format has been successfully created:" The OpenMS tutorial in PDF format has been successfully created: cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo doc/OpenMS_tutorial.pdf doc/OpenMS_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "Creating TOPP/TOPPView pdf tutorial" Creating TOPP/TOPPView pdf tutorial cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E remove_directory TOPP_tutorial/latex_output cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir TOPP_tutorial/ /usr/bin/doxygen Doxyfile warning: Tag 'TCL_SUBST' at line 247 of file 'Doxyfile' has become obsolete. 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LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on refman.pdf (52 pages, 1801562 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E chdir TOPP_tutorial/latex_output/ /usr/bin/makeindex refman.idx This is makeindex, version 2.17 [TeX Live 2023] (kpathsea + Thai support). Scanning input file refman.idx....done (26 entries accepted, 0 rejected). Sorting entries....done (131 comparisons). Generating output file refman.ind....done (66 lines written, 0 warnings). Output written in refman.ind. 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\vbox (badness 10000) detected at line 31 Underfull \vbox (badness 10000) detected at line 40 Underfull \vbox (badness 10000) detected at line 49 [41 <./TOPP_alignment.png (PNG copy)>]) [42] (./TOPP_example_featuredetection.tex Underfull \hbox (badness 10000) in paragraph at lines 27--27 Underfull \vbox (badness 10000) detected at line 27 Underfull \hbox (badness 10000) in paragraph at lines 54--54 Underfull \vbox (badness 10000) detected at line 54 [43]) [44] (./TOPP_example_featuregrouping.tex Underfull \hbox (badness 10000) detected at line 29 [][][] ) [45 <./TOPP_labeled_quant.png (PNG copy)> <./TOPP_labelfree_quant.png (PNG co py)>] (./TOPP_example_id.tex LaTeX Font Warning: Font shape `OMS/ntxtlf/m/n' undefined (Font) using `OMS/cmsy/m/n' instead (Font) for symbol `textbackslash' on input line 4. ) (./TOPP_example_ppp.tex Overfull \hbox (131.68765pt too wide) in paragraph at lines 19--1 \OT1/ntxtlf/b/n/10 IDMap-per \OT1/minntx/m/n/10 tool. The com-bined re-sults ca n then be ex-ported by the \OT1/ntxtlf/b/n/10 Text[]Exporter \OT1/minntx/m/n/10 tool[]: [] [46 <./TOPP_consensus_id.png (PNG copy)>]) [47] (./TOPP_example_convert.tex) [48] (./TOPP_example_qualitycontrol.tex Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 1460) in paragraph at lines 177--177 \OT1/minntx/m/n/10 The Fragment[]Mass[]Error met-ric com-putes a list Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 4108) in paragraph at lines 177--177 []\OT1/minntx/m/n/10 Frequency map of missed cleav-ages as Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 10000) in paragraph at lines 177--177 Underfull \hbox (badness 2237) in paragraph at lines 177--177 []\TS1/ntxtlf/m/n/10 '\OT1/minntx/m/n/10 activation[][][]method\TS1/ntxtlf/m/n/ 10 '\OT1/minntx/m/n/10 set to ac-ti-va-tion method Underfull \hbox (badness 2435) in paragraph at lines 177--177 []\TS1/ntxtlf/m/n/10 '\OT1/minntx/m/n/10 base[][][]peak[][][]intensity\TS1/ntxt lf/m/n/10 '\OT1/minntx/m/n/10 set to high-est in-ten-sity Underfull \hbox (badness 10000) in paragraph at lines 177--177 [49 <./TOPP_qualitycontrol.png>] [50] [51] [52]) [53] (./refman.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. ) (see the transcript file for additional information) Output written on refman.pdf (54 pages, 1812066 bytes). Transcript written on refman.log. cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E copy TOPP_tutorial/latex_output/refman.pdf TOPP_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "The OpenMS tutorial in PDF format has been successfully created:" The OpenMS tutorial in PDF format has been successfully created: cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo doc/TOPP_tutorial.pdf doc/TOPP_tutorial.pdf cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc && /usr/bin/cmake -E echo "" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target doc_tutorials make -f doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build.make doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build.make doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -MF CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o.d -o CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_AASequence.cpp [ 94%] Linking CXX executable ../../bin/Tutorial_AASequence cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_AASequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_AASequence.dir/Tutorial_AASequence.cpp.o -o ../../bin/Tutorial_AASequence ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -MF CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o.d -o CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_Clustering.cpp [ 94%] Linking CXX executable ../../bin/Tutorial_Clustering cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_Clustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_Clustering.dir/Tutorial_Clustering.cpp.o -o ../../bin/Tutorial_Clustering ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_Clustering make -f doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o -MF CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o.d -o CMakeFiles/Tutorial_ComparatorUtils.dir/Tutorial_ComparatorUtils.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:81:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 81 | std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/functional:49, from /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h:38, from /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:31: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:88:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 88 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp:95:8: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 95 | std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ [ 94%] Linking CXX executable ../../bin/Tutorial_ComparatorUtils cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_ComparatorUtils.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_ComparatorUtils make -f doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_DPosition.dir/Tutorial_DPosition.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem 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'/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 94%] Built target Tutorial_DPosition make -f doc/code_examples/CMakeFiles/Tutorial_DRange.dir/build.make doc/code_examples/CMakeFiles/Tutorial_DRange.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_DRange.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o -MF CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o.d -o CMakeFiles/Tutorial_DRange.dir/Tutorial_DRange.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_DRange.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_DRange cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_DRange.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now 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/usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_DRange make -f 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doc/code_examples/CMakeFiles/Tutorial_Enzyme.dir/Tutorial_Enzyme.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_Enzyme make -f doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/build.make doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd 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doc/code_examples/CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -MF CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o.d -o CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_EmpiricalFormula.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_EmpiricalFormula cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_EmpiricalFormula.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_EmpiricalFormula.dir/Tutorial_EmpiricalFormula.cpp.o -o ../../bin/Tutorial_EmpiricalFormula ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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-Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -MF CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o.d -o CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FeatureFinder.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FeatureFinder cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FeatureFinder.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FeatureFinder.dir/Tutorial_FeatureFinder.cpp.o -o ../../bin/Tutorial_FeatureFinder ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FeatureFinder make -f doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -MF CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o.d -o CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FeatureMap.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FeatureMap cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FeatureMap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FeatureMap.dir/Tutorial_FeatureMap.cpp.o -o ../../bin/Tutorial_FeatureMap ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FeatureMap make -f doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -MF CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o.d -o CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FileIO cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO.dir/Tutorial_FileIO.cpp.o -o ../../bin/Tutorial_FileIO ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FileIO make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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doc/code_examples/CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -MF CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o.d -o CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO_mzML.cpp [ 95%] Linking CXX executable ../../bin/Tutorial_FileIO_mzML cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO_mzML.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO_mzML.dir/Tutorial_FileIO_mzML.cpp.o -o ../../bin/Tutorial_FileIO_mzML ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 95%] Built target Tutorial_FileIO_mzML make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build.make doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 96%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o cd 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doc/code_examples/CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -MF CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o.d -o CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_FileIO_Consumer.cpp [ 96%] Linking CXX executable ../../bin/Tutorial_FileIO_Consumer cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_FileIO_Consumer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_FileIO_Consumer.dir/Tutorial_FileIO_Consumer.cpp.o -o ../../bin/Tutorial_FileIO_Consumer ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so 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/build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -MF CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o.d -o CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GaussFilter.cpp [ 96%] Linking CXX executable ../../bin/Tutorial_GaussFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GaussFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GaussFilter.dir/Tutorial_GaussFilter.cpp.o -o ../../bin/Tutorial_GaussFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 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doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MSExperiment.dir/Tutorial_MSExperiment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 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-Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -MF CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o.d -o CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_MSSpectrum.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_MSSpectrum cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_MSSpectrum.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_MSSpectrum.dir/Tutorial_MSSpectrum.cpp.o -o ../../bin/Tutorial_MSSpectrum ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target Tutorial_MSSpectrum make -f doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MapAlignment.dir/Tutorial_MapAlignment.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MetaInfo.dir/Tutorial_MetaInfo.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem 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doc/code_examples/CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -MF CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o.d -o CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_Param.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_Param cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_Param.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_Param.dir/Tutorial_Param.cpp.o -o ../../bin/Tutorial_Param ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Built target Tutorial_Param make -f doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_PeakPickerCWT.dir/Tutorial_PeakPickerCWT.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && 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/usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 97%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Precursor.dir/Tutorial_Precursor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ 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CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o.d -o CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_RangeManager.cpp [ 97%] Linking CXX executable ../../bin/Tutorial_RangeManager cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_RangeManager.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_RangeManager.dir/Tutorial_RangeManager.cpp.o -o ../../bin/Tutorial_RangeManager ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 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/build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/build.make doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB 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CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_ResidueModification.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_ResidueModification cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_ResidueModification.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_ResidueModification.dir/Tutorial_ResidueModification.cpp.o -o ../../bin/Tutorial_ResidueModification ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_ResidueModification make -f doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem 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doc/code_examples/CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -MF CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o.d -o CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_SavitzkyGolayFilter.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_SavitzkyGolayFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_SavitzkyGolayFilter.dir/Tutorial_SavitzkyGolayFilter.cpp.o -o ../../bin/Tutorial_SavitzkyGolayFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_SavitzkyGolayFilter make -f doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -MF CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o.d -o CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_TOFCalibration.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_TOFCalibration cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_TOFCalibration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_TOFCalibration.dir/Tutorial_TOFCalibration.cpp.o -o ../../bin/Tutorial_TOFCalibration ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_TOFCalibration make -f doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build.make doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -MF CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o.d -o CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_TheoreticalSpectrumGenerator.cpp [ 98%] Linking CXX executable ../../bin/Tutorial_TheoreticalSpectrumGenerator cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_TheoreticalSpectrumGenerator.dir/Tutorial_TheoreticalSpectrumGenerator.cpp.o -o ../../bin/Tutorial_TheoreticalSpectrumGenerator ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Built target Tutorial_TheoreticalSpectrumGenerator make -f doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build.make doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [ 98%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -MF CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o.d -o CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_MorphologicalFilter.cpp [100%] Linking CXX executable ../../bin/Tutorial_MorphologicalFilter cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_MorphologicalFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_MorphologicalFilter.dir/Tutorial_MorphologicalFilter.cpp.o -o ../../bin/Tutorial_MorphologicalFilter ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_MorphologicalFilter make -f doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build.make doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_Unlabeled.dir/Tutorial_Unlabeled.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem 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/usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_Unlabeled make -f doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/build.make doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -MF CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o.d -o CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_typeAsString.cpp [100%] Linking CXX executable ../../bin/Tutorial_typeAsString cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_typeAsString.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_typeAsString.dir/Tutorial_typeAsString.cpp.o -o ../../bin/Tutorial_typeAsString ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_typeAsString make -f doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -MF CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o.d -o CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_PeakIntensityPredictor.cpp [100%] Linking CXX executable ../../bin/Tutorial_PeakIntensityPredictor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_PeakIntensityPredictor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_PeakIntensityPredictor.dir/Tutorial_PeakIntensityPredictor.cpp.o -o ../../bin/Tutorial_PeakIntensityPredictor ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_PeakIntensityPredictor make -f doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -MF CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o.d -o CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_Spectrum1D.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_Spectrum1D cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_Spectrum1D.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_Spectrum1D.dir/Tutorial_GUI_Spectrum1D.cpp.o -o ../../bin/Tutorial_GUI_Spectrum1D ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_Spectrum1D make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -MF CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o.d -o CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_ParamEditor.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_ParamEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_ParamEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_ParamEditor.dir/Tutorial_GUI_ParamEditor.cpp.o -o ../../bin/Tutorial_GUI_ParamEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_ParamEditor make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/depend make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openms-2.6.0+cleaned1 /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make -f doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build.make doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/build make[4]: Entering directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Building CXX object doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_SVG_LIB -DQT_WIDGETS_LIB -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/include -isystem /usr/lib -isystem /usr/lib/i386-linux-gnu/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openms/thirdparty/evergreen/src -isystem /build/reproducible-path/openms-2.6.0+cleaned1/debian -isystem /usr/include/hdf5/serial -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/libwildmagic -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openswathalgo/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include -isystem /build/reproducible-path/openms-2.6.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fvisibility=hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -MD -MT doc/code_examples/CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -MF CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o.d -o CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -c /build/reproducible-path/openms-2.6.0+cleaned1/doc/code_examples/Tutorial_GUI_ListEditor.cpp [100%] Linking CXX executable ../../bin/Tutorial_GUI_ListEditor cd /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/doc/code_examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tutorial_GUI_ListEditor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openms-2.6.0+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now CMakeFiles/Tutorial_GUI_ListEditor.dir/Tutorial_GUI_ListEditor.cpp.o -o ../../bin/Tutorial_GUI_ListEditor ../../lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ../../lib/i386-linux-gnu/libOpenMS.so.2.6.0 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 ../../lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 /usr/lib/i386-linux-gnu/libCbc.so /usr/lib/i386-linux-gnu/libCgl.so /usr/lib/i386-linux-gnu/libClp.so /usr/lib/i386-linux-gnu/libCoinUtils.so /usr/lib/i386-linux-gnu/libOsi.so /usr/lib/i386-linux-gnu/libOsiClp.so /usr/lib/i386-linux-gnu/libsvm.so /usr/lib/i386-linux-gnu/libxerces-c.so /usr/lib/i386-linux-gnu/libboost_iostreams.so /usr/lib/i386-linux-gnu/libboost_date_time.so /usr/lib/i386-linux-gnu/libboost_math_c99.so /usr/lib/i386-linux-gnu/libboost_regex.so /usr/lib/i386-linux-gnu/libWm5Core.so /usr/lib/i386-linux-gnu/libWm5Mathematics.so /usr/lib/i386-linux-gnu/libbz2.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libz.so /usr/lib/i386-linux-gnu/libsqlite3.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/i386-linux-gnu/libcrypto.so /usr/lib/i386-linux-gnu/libcurl.so /usr/lib/i386-linux-gnu/libsz.so /usr/lib/i386-linux-gnu/libdl.a /usr/lib/i386-linux-gnu/libm.so /usr/lib/i386-linux-gnu/libglpk.so -ldl /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/gcc/i686-linux-gnu/13/libgomp.so /usr/lib/i386-linux-gnu/libpthread.a /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 make[4]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' [100%] Built target Tutorial_GUI_ListEditor make[3]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ChargePair.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Compomer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ConstRefVector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ConvexHull2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappingTerm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappingRule.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVReference.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/CVMappings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DBoundingBox.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DIntervalBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DPosition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DRange.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DataValue.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Date.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DateTime.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DefaultParamHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/DistanceMatrix.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/FASTAContainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/GridFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/IsotopeCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/KDTree.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ListUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ListUtilsIO.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/LPWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Map.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/MassExplainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/MatchedIterator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Matrix.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Param.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/QTCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/String.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/StringUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/StringListUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/ToolDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/DATASTRUCTURES/Utils/MapUtilities.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/AbsoluteQuantitationStandards.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Acquisition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/AcquisitionInfo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTerm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTermList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/CVTermListInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ChromatogramSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ContactPerson.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DataArrays.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DataProcessing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Digestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DocumentIDTagger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/DocumentIdentifier.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ExperimentalDesign.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ExperimentalSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Gradient.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/HPLC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Identification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IdentificationHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Instrument.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/InstrumentSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IonDetector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/IonSource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MSQuantifications.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MassAnalyzer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoInterfaceUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/MetaInfoRegistry.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Modification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideEvidence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/PeptideIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Precursor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Product.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ProteinHit.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ProteinIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Sample.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SampleTreatment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ScanWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Software.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SourceFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumIdentification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumLookup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumMetaDataLookup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/SpectrumSettings.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/Tagging.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/AppliedProcessingStep.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DBSearchParam.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataProcessingSoftware.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataProcessingStep.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/DataQuery.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentificationData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentificationDataConverter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentifiedCompound.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/IdentifiedSequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MetaData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MoleculeParentMatch.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/MoleculeQueryMatch.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ParentMolecule.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ParentMoleculeGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/QueryMatchGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ScoreType.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/METADATA/ID/ScoredProcessingResult.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/AreaIterator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/BaseFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ChromatogramPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ChromatogramTools.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ComparatorUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConsensusFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConversionHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConsensusMap.h -- Up-to-date: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/ConversionHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/DPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Feature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/FeatureHandle.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/FeatureMap.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MassTrace.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MRMFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MRMTransitionGroup.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSChromatogram.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/MSSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/OnDiscMSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Peak1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/Peak2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/PeakIndex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RangeManager.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RangeUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/RichPeak2D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/StandardTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/StandardDeclarations.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/KERNEL/SpectrumHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/AAIndex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/AASequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/CrossLinksDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DecoyGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Element.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ElementDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EmpiricalFormula.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/EnzymaticDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzyme.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/DigestionEnzymeDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationDefinition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ModificationsDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/NASequence.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ProteaseDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ProteaseDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Residue.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ResidueDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ResidueModification.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RNaseDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RNaseDigestion.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Ribonucleotide.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/RibonucleotideDB.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SimpleTSGXLMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SpectrumAnnotator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/Tagger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/WeightWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Base64.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Bzip2Ifstream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/Bzip2InputStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CachedMzML.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ChromeleonFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CompressedInputSource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CVMappingFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ConsensusXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ControlledVocabulary.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/CsvFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DTA2DFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/EDTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ExperimentalDesignFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FASTAFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FeatureXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FileHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/GzipIfstream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/GzipInputStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HDF5Connector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IBSpectraFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IdXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/IndexedMzMLFileLoader.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/InspectInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/InspectOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/KroenikFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/LibSVMEncoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MRMFeaturePickerFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MRMFeatureQCFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MS2File.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSNumpressCoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSPFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSPGenericFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MSstatsFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotGenericFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotRemoteQuery.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MascotXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MsInspectFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzDataFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzTab.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzTabFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OMSSACSVFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OMSSAXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/OSWFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ParamXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PTMXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PeakTypeEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepNovoInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepNovoOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PepXMLFileMascot.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/PercolatorOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ProtXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/QcMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SequestInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SequestOutfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SpecArrayFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SVOutStream.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SwathFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SqliteConnector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/SqMassFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TextFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ToolDescriptionFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TransformationXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/UnimodXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XTandemInfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XTandemXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/FileTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzIdentMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/MzQuantMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/TraMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XMassFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/XQuestResultXMLFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/ZlibCompression.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/AcqusHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/FidHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzDataHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/TraMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/XMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/VALIDATORS/XMLValidator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h -- Installing: 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-- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/SVM/SimpleSVM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/SVM/SVMWrapper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/PIP/LocalLinearMap.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/MRMMapping.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/HyperScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/PScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/XLMS/XQuestScores.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/HashGrid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/ID/IDFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/GaussFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NLargest.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/Scaler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/DetectabilitySimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/DigestSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/EGHModel.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/EGHFitter1D.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/IonizationSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/MSSim.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RTSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RawMSSignalSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/SimTypes.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/BaseLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/O18Labeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/SILACLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/SIMULATION/LABELING/ICPLLabeler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Contaminants.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/FragmentMassError.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/FWHM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/MissedCleavages.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Ms2IdentificationRate.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/Ms2SpectrumStats.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/MzCalibration.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/PeptideMass.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/QCBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/RTAlignment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/DBSuitability.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/QC/TIC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ConsoleUtils.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/INIUpdater.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/MapAlignerBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/OpenSwathBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ParameterInformation.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/ToolHandler.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/APPLICATIONS/TOPPBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/build_config.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/config.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/openms_package_version.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/openms_data_path.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms/OpenMSConfig.h -- Up-to-date: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ConsensusXML_1_5.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/ToolDescriptor_1_0.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_0.xsd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/Param_1_0.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/pepXML_v114.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_4.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_8.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/IdXML_1_1.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_3.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/FeatureXML_1_2.xsd -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/openms/SCHEMAS/mzML_1_10.xsd -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnUtil.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/superhirn/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnConfig.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/libOpenMS_GUI.so.2.6.0 -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/SwathWizardBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MISC/ExternalProcessMBox.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MISC/GUIHelpers.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisTickCalculator.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisPainter.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/AxisWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ColorSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedTabBar.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/EnhancedWorkspace.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/FilterList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/GUIProgressLoggerImpl.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/HistogramWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/InputFile.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/InputFileList.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/LayerData.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ListEditor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MetaDataBrowser.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MultiGradient.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/MultiGradientSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/OutputDirectory.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/ParamEditor.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectraViewWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectraIdentificationViewWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum1DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum1DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum2DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum2DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/Spectrum3DWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectrumCanvas.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SpectrumWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/SwathLibraryStats.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASEdge.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASInputFileListVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASLogWindow.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASMergerVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASOutputFileListVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASResource.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASResources.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASScene.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASSplitterVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASTabBar.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASToolVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASTreeView.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASVertex.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPASWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/HistogramDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/PythonModuleRequirement.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/PythonSelector.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/SwathTabWidget.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/DIALOGS/ToolsDialog.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/include/OpenMS/OpenMS/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu/src/openms_gui/VISUAL/OpenMS_GUIConfig.h -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/INIFileEditor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SwathWizard -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOPPAS -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOPPView -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/BaselineFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CometAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CompNovo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CompNovoCID -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ConsensusID -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ConsensusMapNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CruxAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DatabaseSuitability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Decharger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DTAExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/EICExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ExternalCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FalseDiscoveryRate -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderCentroided -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderIdentification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderIsotopeWavelet -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMetabo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMRM -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMultiplex -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerLabeled -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeled -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeledKD -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureLinkerUnlabeledQT -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FidoAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileInfo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FileMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/GenericWrapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/GNPSExport -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/HighResPrecursorMassCorrector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDConflictResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDFileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDPosteriorErrorProbability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDRipper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDRTCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InclusionExclusionListCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InspectAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/InternalCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IsobaricAnalyzer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/LuciphorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerIdentification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerPoseClustering -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerSpectrum -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapAlignerTreeGuided -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapRTTransformer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MapStatistics -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MaRaClusterAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MascotAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MascotAdapterOnline -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MassTraceExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMMapper -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSGFPlusAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MyriMatchAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MzTabExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NoiseFilterGaussian -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NoiseFilterSGolay -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OMSSAAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenPepXL -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenPepXLLF -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathAnalyzer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathAssayGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathChromatogramExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathConfidenceScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathDecoyGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathFeatureXMLToTSV -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathRTNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerHiRes -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerWavelet -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PepNovoAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeptideIndexer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PercolatorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PhosphoScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PrecursorIonSelector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PrecursorMassCorrector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinInference -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinQuantifier -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteinResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PTModel -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PTPredict -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QualityControl -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTModel -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTPredict -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SeedListGenerator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpecLibSearcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterBernNorm -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterMarkerMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterNLargest -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterNormalizer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterParentPeakMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterScaler -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterSqrtMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterThresholdMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraFilterWindowMower -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TextExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TOFCalibration -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XFDR -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XTandemAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ExecutePipeline -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Resampler -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/AccurateMassSearch -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/AssayGeneratorMetabo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ClusterMassTraces -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ClusterMassTracesByPrecursor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/CVInspector -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DatabaseFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DecoyDatabase -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DeMeanderize -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Digestor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/DigestorMotif -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/Epifany -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ERPairFinder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderMetaboIdent -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FeatureFinderSuperHirn -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FFEval -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/FuzzyDiff -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDDecoyProbability -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDMassAccuracy -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDScoreSwitcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/IDSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/LabeledEval -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MassCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaboliteAdductDecharger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaboliteSpectralMatcher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MetaProSIP -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMPairFinder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSFraggerAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSSimulator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MSstatsConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MultiplexResolver -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MzMLSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NovorAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/NucleicAcidSearchEngine -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenMSInfo -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PeakPickerIterative -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/PSMFeatureExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCEmbedder -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCExporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCExtractor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCImporter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCMerger -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/QCShrinker -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ProteomicsLFQ -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNADigestor -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNAMassCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNPxlXICFilter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RNPxlSearch -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/RTEvaluation -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SemanticValidator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SequenceCoverageCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SimpleSearchEngine -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SiriusAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpecLibCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SpectraSTSearchAdapter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/StaticModification -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TICCalculator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TransformationEvaluation -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/XMLValidator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/TargetedFileConverter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathDIAPreScoring -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathMzMLFileCacher -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathWorkflow -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathFileSplitter -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/OpenSwathRewriteToFeatureXML -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/MRMTransitionGroupPicker -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/ImageCreator -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/bin/INIUpdater -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/graph_legend.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeakPickerWavelet.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__dep__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bc_sd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TextExporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_calibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_9_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerTreeGuided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SpecLibCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/deprecated.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/minus.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SiriusAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1AnnotatedHit__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_0.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_9.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ERPairFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSFraggerAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-win_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ExecutePipeline.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_f.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_a5a355bc2fffce99f4d06ccbc3519db8.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCImporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathAnalyzer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_eval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DeMeanderize.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/svg.min.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ImageCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_noisefilter.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterThresholdMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_views.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterParentPeakMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__tutorial_2TOPPAS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/todo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_2.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_DatabaseSuitability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Kernel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNADigestor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeptideIndexer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_4.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CometAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_editing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_s.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SpectraSTSearchAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__Tutorial__html_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_example_profile_data_processing.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CompNovo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_feature_detection_centroided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QuickStart_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_INIUpdater.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DigestorMotif.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_PSMFeatureExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderIdentification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_5_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_XMLValidator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPASBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InclusionExclusionListCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_example_merger.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SILACAnalyzer_algorithm.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ConsensusMapNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_NoiseFilterSGolay.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDScoreSwitcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathConfidenceScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_pp_picked.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TextExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_Ecoli_Identification.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_mapalignment.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MassTraceExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/EICExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_3.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_hd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDPosteriorErrorProbability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_g.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/favicon.ico -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_EICExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PepNovoAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/style_ini.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_04f2ecc425faf0d475a3caf484e551f3_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/known_dev_bugs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPViewBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OMSSAAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNADigestor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Changelog_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MultiplexResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_6_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SeedListGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Quickstart.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapStatistics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IsobaricAnalyzer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusID_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_1.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderIsotopeWavelet.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_RTModel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_h.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_QualityControl.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_win_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathRTNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Modules_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_NoiseFilterGaussian.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExecutePipeline_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_featuredetection.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/pages.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FeatureFinderSuperHirn.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeledQT.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSstatsConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__concepts_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_enum.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FFEval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNAMassCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathChromatogramExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OMSSAAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__advanced_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSstatsConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_LabeledEval.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzTabExporter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapterOnline_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_0_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_Decharger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIsotopeWavelet_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PhosphoScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FidoAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c9f25c269f6c79194ec5671a83695c64_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1AnnotatedHit__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp_source.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherit_graph_1.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_analysis.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InclusionExclusionListCreator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpecLibSearcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_labeled_quant.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QApplicationTOPP_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_interface.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp__dep__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MascotAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlSearch_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterMarkerMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_smoothing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_Digestor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_4_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaboliteAdductDecharger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XMLValidator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTPredict_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ExternalCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeptideIndexer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_DTAExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_parameters.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dynsections.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RTEvaluation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ImageCreator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bc_s.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ChangeLog.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_mac_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderSuperHirn_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MSGFPlusAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis__ID_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCShrinker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_bd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_ad.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathConfidenceScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PTModel_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DecoyDatabase.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MyriMatchAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/splitbard.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathRewriteToFeatureXML.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathFileSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSstatsConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassTraceExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/open.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SemanticValidator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dot_inline_dotgraph_1.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_c39c27c466e6a9c3e8f373e7a3dd7828_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_Quantitation.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_a.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PeakPickerHiRes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDFileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tutorial.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Simulation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView__calling__topp_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_general.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp.html -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinQuantifier.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerBase_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathWorkflow.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_mac.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RNPxlXICFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/docd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NovorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doc.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Terms_Map.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/experimental.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_2_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraComparison.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDScoreSwitcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MzMLSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOPPAS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ConsensusID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDRipper.html -- Installing: 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Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers_func.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Main_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ConsensusMapNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp__incl.svg -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_sd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FidoAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_Epifany.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CompNovoCID.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_0.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/variables_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_14.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_18.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_e.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_15.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_d.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_a.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_0.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_9.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_17.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_a.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/all_b.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_12.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/mag_seld.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_1.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_14.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/typedefs_2.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_6.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/groups_7.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/pages_2.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/search/files_9.js -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_raw_data.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FalseDiscoveryRate.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMPairFinder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/closed.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDRTCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DecoyDatabase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/formula.repository -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp__incl.svg -- Installing: 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-- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_PeakPickerIterative.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRipper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsStatistics.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Visual.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DigestorMotif_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_type.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsMisc.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAssayGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMRM.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Spectrum2DWidget.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_DatabaseFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo.html -- Installing: 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/build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView__interface_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TICCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_1D.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS__Tutorial_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapRTTransformer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FuzzyDiff_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/index.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_CruxAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Format_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SignalProcessing.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_Resampler.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Resampler_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_baseline_reduction.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeled.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOPPView.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTracesByPrecursor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraMerger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFileConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MRMMapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AssayGeneratorMetabo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__System.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_general.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraPreprocessers_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_h.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-macs-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TICCalculator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathChromatogramExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TransformationEvaluation_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/sync_on.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderCentroided_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Spectrum3DWidget.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SwathWizard.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDRTCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMultiplex.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_XFDR.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerIdentification_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerLabeled_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PercolatorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_75x55_transparent.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TargetedFileConverter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileMerger.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Kernel_DataPoints.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_introduction.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/improvement.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GenericWrapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_examples.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LabeledEval_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_baseline_filtered.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SiriusAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tab_b.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-win-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/plusd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIUpdater_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ClusterMassTraces.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals_defs.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMassAccuracy_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_documentation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/topics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_7.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerHiRes_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ImageCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MascotAdapterOnline.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_menu.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_GNPSExport.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_labelfree_quant.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/bug.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MaRaClusterAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_ebd3f5f0482b02ff4c3b89293f04ed6c_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_concepts.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapStatistics_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_hotkeys.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InspectAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDConflictResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/GNPSExport_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathDIAPreScoring.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderIdentification_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaboliteSpectralMatcher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapRTTransformer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterScaler.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Metadata.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad_dep_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-macs_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MRMPairFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_fd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMTransitionGroupPicker_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMSInfo_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterBernNorm_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXLLF_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XTandemAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SequenceCoverageCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_NucleicAcidSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PrecursorMassCorrector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOFCalibration_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_results_3d.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS_overview.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_statistics.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRewriteToFeatureXML_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSSimulator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDDecoyProbability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_win.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_OpenSwathMzMLFileCacher.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterSqrtMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_linux_bin.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MascotAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MzTabExporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PepNovoAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterBernNorm.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterSGolay_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_e68e8157741866f444e17edd764ebbae.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_3.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_XTandemAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraClustering.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MassCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathMzMLFileCacher_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerIdentification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterNormalizer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/files.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerWavelet_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_caacfbd3799919944b233424e5b36887.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_INIFileEditor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_ProteinInference.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDExtractor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MRMMapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/pyOpenMS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PrecursorIonSelector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PTModel.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespaces.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/plus.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MathFunctionsStatistics.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Terms_Spectrum.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinQuantifier_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine_1_1HasInvalidLength__coll__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ExternalCode_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_signalprocessing.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerUnlabeledKD.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_run_options.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetabo_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/StaticModification_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNPxlSearch.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledQT_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPView__elements.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/hierarchy.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CVInspector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Concept.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFileSplitter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install_linux.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_NovorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_qualitycontrol.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PeakPickerIterative_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SvmTheoreticalSpectrumGeneratorTrainer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Decharger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorMassCorrector_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectrumWidgets_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteAdductDecharger_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SeedListGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterThresholdMower_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FAQ_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/inherits.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/HighResPrecursorMassCorrector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenMS__Tutorial__html_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenPepXL.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterParentPeakMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/minusd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTEvaluation_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_AssayGeneratorMetabo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_modes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/nav_hd.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MaRaClusterAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FFEval_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MassCalculator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SimpleSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_ff_centroided.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_ClusterMassTracesByPrecursor.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderCentroided.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Dialogs_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CompNovoCID_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_LuciphorAdapter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TransformationEvaluation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraSTSearchAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_8.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileInfo_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FalseDiscoveryRate_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDMapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__TOPPAS__elements.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTModel_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Datastructures.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathFeatureXMLToTSV.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/doxygen_2public_2TOPPAS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/tabs.css -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerPoseClustering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileInfo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NucleicAcidSearchEngine_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/graph_legend.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PercolatorAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerTreeGuided_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureFinderMetabo.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathAnalyzer_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_8_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PrecursorIonSelector_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_PTPredict.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_ppp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/NoiseFilterGaussian_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakMarker_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FuzzyDiff.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_AccurateMassSearch.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_FeatureFinderMetaboIdent.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_edges.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__SpectraFilter_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SemanticValidator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeled_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_tools_noisefilter_filtered.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/XFDR_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase__inherit__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_TargetedFileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SimpleSearchEngine_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapNormalizer_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibSearcher_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDecoyGenerator_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PyOpenMS_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_StaticModification.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSGFPlusAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Epifany_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad_dep.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCShrinker_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterMarkerMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerPoseClustering_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCImporter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/Digestor_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPGNPSExport__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespaceOpenMS.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_CVInspector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileFilter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/install-linux-bin_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DeMeanderize_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_BaselineFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathAssayGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/LuciphorAdapter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CometAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FileConverter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP__scripting_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/structNucleicAcidSearchEngine_1_1PrecursorInfo__coll__graph.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderopen.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditorWindow_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMetaboIdent_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_advanced.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine-members.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathWorkflow_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDDecoyProbability.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_1_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_IDSplitter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/InternalCalibration_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileConverter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Math_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterSqrtMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/splitbar.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__PeakPicking.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureGrouping.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMRM_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/jquery.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DatabaseSuitability_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FileMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions_vars.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_2.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathFeatureXMLToTSV_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterBernNorm_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaDataBrowser.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizardBase_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PhosphoScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_handling.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_QCEmbedder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_MapAlignerSpectrum.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/globals_type.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_id.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/dir_1358a02fb1ca1b471aa8f78386a5e6ad.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classTOPPBase__inherit__graph_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MSSimulator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_documentation.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCMerger_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderopend.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/INIFileEditor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MyriMatchAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDSplitter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_SvmTheoreticalSpectrumGeneratorTrainer.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/menudata.js -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ERPairFinder_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FileIO.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_convert.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_alignment.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_icons.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Analysis_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaProSIP_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/RTPredict_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_help.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinResolver_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathRTNormalizer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/DTAExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerLabeled.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classes.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_IDConflictResolver.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDPosteriorErrorProbability_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/AccurateMassSearch_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_TOFCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MultiplexResolver_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ClusterMassTraces_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MetaProSIP.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MSFraggerAdapter_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/namespacemembers.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_SpectraFilterWindowMower.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenSwathDIAPreScoring_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNPxlXICFilter.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureFinderMultiplex_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__MapAlignment_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_MRMTransitionGroupPicker.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/external_code.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterNLargest_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_parts.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCEmbedder_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MzMLSplitter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/folderclosedd.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_5.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_OpenSwathDecoyGenerator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Filtering.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCImporter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterWindowMower_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IsobaricAnalyzer_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_FeatureLinkerBase.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpecLibCreator_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__Chemistry.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/PSMFeatureExtractor_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/OpenPepXL_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_simple_example.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_InternalCalibration.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MapAlignerSpectrum_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_HighResPrecursorMassCorrector.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/UTILS_RNAMassCalculator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/classNucleicAcidSearchEngine.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDExtractor_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteomicsLFQ_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/functions.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QualityControl_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_InclusionExclusionListCreator.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/MetaboliteSpectralMatcher_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/common-cmake-parameters_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/ProteinInference_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_example_featuregrouping.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SwathWizard_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/FeatureLinkerUnlabeledKD_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/IDMapper_8cpp.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/sync_off.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_8doxygen.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/QCExporter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/annotated.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/CruxAdapter_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPAS_BSA_results_2d.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPP_GenericWrapper.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/form_7_dark.png -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/SpectraFilterScaler_8cpp__incl_org.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/TOPPView_peakpicking.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/BaselineFilter_8cpp__incl.svg -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/html/group__FeatureFinder.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/index.html -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/TOPP_tutorial.pdf -- Installing: /build/reproducible-path/openms-2.6.0+cleaned1/debian/tmp/usr/share/doc/openms/OpenMS_tutorial.pdf make[2]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1/obj-i686-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/openms-2.6.0+cleaned1' dh_install -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0//usr/lib/i386-linux-gnu cp --reflink=auto -a ./debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 ./debian/tmp/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/libopenms2.6.0//usr/lib/i386-linux-gnu/ install -m0755 -d debian/libopenms-dev//usr/share/openms cp --reflink=auto -a debian/tmp/usr/share/openms/cmake debian/libopenms-dev//usr/share/openms/ install -m0755 -d debian/libopenms-dev/usr/include cp --reflink=auto -a debian/tmp/usr/include/OpenMS/OpenMS debian/libopenms-dev/usr/include/ install -m0755 -d debian/topp//usr/bin cp --reflink=auto -a debian/tmp/usr/bin/AccurateMassSearch debian/tmp/usr/bin/AssayGeneratorMetabo debian/tmp/usr/bin/BaselineFilter debian/tmp/usr/bin/CVInspector debian/tmp/usr/bin/ClusterMassTraces debian/tmp/usr/bin/ClusterMassTracesByPrecursor debian/tmp/usr/bin/CometAdapter debian/tmp/usr/bin/CompNovo debian/tmp/usr/bin/CompNovoCID debian/tmp/usr/bin/ConsensusID debian/tmp/usr/bin/ConsensusMapNormalizer debian/tmp/usr/bin/CruxAdapter debian/tmp/usr/bin/DTAExtractor debian/tmp/usr/bin/DatabaseFilter debian/tmp/usr/bin/DatabaseSuitability debian/tmp/usr/bin/DeMeanderize debian/tmp/usr/bin/Decharger debian/tmp/usr/bin/DecoyDatabase debian/tmp/usr/bin/Digestor debian/tmp/usr/bin/DigestorMotif debian/tmp/usr/bin/EICExtractor debian/tmp/usr/bin/ERPairFinder debian/tmp/usr/bin/Epifany debian/tmp/usr/bin/ExecutePipeline debian/tmp/usr/bin/ExternalCalibration debian/tmp/usr/bin/FFEval debian/tmp/usr/bin/FalseDiscoveryRate debian/tmp/usr/bin/FeatureFinderCentroided debian/tmp/usr/bin/FeatureFinderIdentification debian/tmp/usr/bin/FeatureFinderIsotopeWavelet debian/tmp/usr/bin/FeatureFinderMRM debian/tmp/usr/bin/FeatureFinderMetabo debian/tmp/usr/bin/FeatureFinderMetaboIdent debian/tmp/usr/bin/FeatureFinderMultiplex debian/tmp/usr/bin/FeatureFinderSuperHirn debian/tmp/usr/bin/FeatureLinkerLabeled debian/tmp/usr/bin/FeatureLinkerUnlabeled debian/tmp/usr/bin/FeatureLinkerUnlabeledKD debian/tmp/usr/bin/FeatureLinkerUnlabeledQT debian/tmp/usr/bin/FidoAdapter debian/tmp/usr/bin/FileConverter debian/tmp/usr/bin/FileFilter debian/tmp/usr/bin/FileInfo debian/tmp/usr/bin/FileMerger debian/tmp/usr/bin/FuzzyDiff debian/tmp/usr/bin/GNPSExport debian/tmp/usr/bin/GenericWrapper debian/tmp/usr/bin/HighResPrecursorMassCorrector debian/tmp/usr/bin/IDConflictResolver debian/tmp/usr/bin/IDDecoyProbability debian/tmp/usr/bin/IDExtractor debian/tmp/usr/bin/IDFileConverter debian/tmp/usr/bin/IDFilter debian/tmp/usr/bin/IDMapper debian/tmp/usr/bin/IDMassAccuracy debian/tmp/usr/bin/IDMerger debian/tmp/usr/bin/IDPosteriorErrorProbability debian/tmp/usr/bin/IDRTCalibration debian/tmp/usr/bin/IDRipper debian/tmp/usr/bin/IDScoreSwitcher debian/tmp/usr/bin/IDSplitter debian/tmp/usr/bin/INIFileEditor debian/tmp/usr/bin/INIUpdater debian/tmp/usr/bin/ImageCreator debian/tmp/usr/bin/InclusionExclusionListCreator debian/tmp/usr/bin/InspectAdapter debian/tmp/usr/bin/InternalCalibration debian/tmp/usr/bin/IsobaricAnalyzer debian/tmp/usr/bin/LabeledEval debian/tmp/usr/bin/LuciphorAdapter debian/tmp/usr/bin/MRMMapper debian/tmp/usr/bin/MRMPairFinder debian/tmp/usr/bin/MRMTransitionGroupPicker debian/tmp/usr/bin/MSFraggerAdapter debian/tmp/usr/bin/MSGFPlusAdapter debian/tmp/usr/bin/MSSimulator debian/tmp/usr/bin/MSstatsConverter debian/tmp/usr/bin/MaRaClusterAdapter debian/tmp/usr/bin/MapAlignerIdentification debian/tmp/usr/bin/MapAlignerPoseClustering debian/tmp/usr/bin/MapAlignerSpectrum debian/tmp/usr/bin/MapAlignerTreeGuided debian/tmp/usr/bin/MapNormalizer debian/tmp/usr/bin/MapRTTransformer debian/tmp/usr/bin/MapStatistics debian/tmp/usr/bin/MascotAdapter debian/tmp/usr/bin/MascotAdapterOnline debian/tmp/usr/bin/MassCalculator debian/tmp/usr/bin/MassTraceExtractor debian/tmp/usr/bin/MetaProSIP debian/tmp/usr/bin/MetaboliteAdductDecharger debian/tmp/usr/bin/MetaboliteSpectralMatcher debian/tmp/usr/bin/MultiplexResolver debian/tmp/usr/bin/MyriMatchAdapter debian/tmp/usr/bin/MzMLSplitter debian/tmp/usr/bin/MzTabExporter debian/tmp/usr/bin/NoiseFilterGaussian debian/tmp/usr/bin/NoiseFilterSGolay debian/tmp/usr/bin/NovorAdapter debian/tmp/usr/bin/NucleicAcidSearchEngine debian/tmp/usr/bin/OMSSAAdapter debian/tmp/usr/bin/OpenMSInfo debian/tmp/usr/bin/OpenPepXL debian/tmp/usr/bin/OpenPepXLLF debian/tmp/usr/bin/OpenSwathAnalyzer debian/tmp/usr/bin/OpenSwathAssayGenerator debian/tmp/usr/bin/OpenSwathChromatogramExtractor debian/tmp/usr/bin/OpenSwathConfidenceScoring debian/tmp/usr/bin/OpenSwathDIAPreScoring debian/tmp/usr/bin/OpenSwathDecoyGenerator debian/tmp/usr/bin/OpenSwathFeatureXMLToTSV debian/tmp/usr/bin/OpenSwathFileSplitter debian/tmp/usr/bin/OpenSwathMzMLFileCacher debian/tmp/usr/bin/OpenSwathRTNormalizer debian/tmp/usr/bin/OpenSwathRewriteToFeatureXML debian/tmp/usr/bin/OpenSwathWorkflow debian/tmp/usr/bin/PSMFeatureExtractor debian/tmp/usr/bin/PTModel debian/tmp/usr/bin/PTPredict debian/tmp/usr/bin/PeakPickerHiRes debian/tmp/usr/bin/PeakPickerIterative debian/tmp/usr/bin/PeakPickerWavelet debian/tmp/usr/bin/PepNovoAdapter debian/tmp/usr/bin/PeptideIndexer debian/tmp/usr/bin/PercolatorAdapter debian/tmp/usr/bin/PhosphoScoring debian/tmp/usr/bin/PrecursorIonSelector debian/tmp/usr/bin/PrecursorMassCorrector debian/tmp/usr/bin/ProteinInference debian/tmp/usr/bin/ProteinQuantifier debian/tmp/usr/bin/ProteinResolver debian/tmp/usr/bin/ProteomicsLFQ debian/tmp/usr/bin/QCCalculator debian/tmp/usr/bin/QCEmbedder debian/tmp/usr/bin/QCExporter debian/tmp/usr/bin/QCExtractor debian/tmp/usr/bin/QCImporter debian/tmp/usr/bin/QCMerger debian/tmp/usr/bin/QCShrinker debian/tmp/usr/bin/QualityControl debian/tmp/usr/bin/RNADigestor debian/tmp/usr/bin/RNAMassCalculator debian/tmp/usr/bin/RNPxlSearch debian/tmp/usr/bin/RNPxlXICFilter debian/tmp/usr/bin/RTEvaluation debian/tmp/usr/bin/RTModel debian/tmp/usr/bin/RTPredict debian/tmp/usr/bin/Resampler debian/tmp/usr/bin/SeedListGenerator debian/tmp/usr/bin/SemanticValidator debian/tmp/usr/bin/SequenceCoverageCalculator debian/tmp/usr/bin/SimpleSearchEngine debian/tmp/usr/bin/SiriusAdapter debian/tmp/usr/bin/SpecLibCreator debian/tmp/usr/bin/SpecLibSearcher debian/tmp/usr/bin/SpectraFilterBernNorm debian/tmp/usr/bin/SpectraFilterMarkerMower debian/tmp/usr/bin/SpectraFilterNLargest debian/tmp/usr/bin/SpectraFilterNormalizer debian/tmp/usr/bin/SpectraFilterParentPeakMower debian/tmp/usr/bin/SpectraFilterScaler debian/tmp/usr/bin/SpectraFilterSqrtMower debian/tmp/usr/bin/SpectraFilterThresholdMower debian/tmp/usr/bin/SpectraFilterWindowMower debian/tmp/usr/bin/SpectraMerger debian/tmp/usr/bin/SpectraSTSearchAdapter debian/tmp/usr/bin/StaticModification debian/tmp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/tmp/usr/bin/SwathWizard debian/tmp/usr/bin/TICCalculator debian/tmp/usr/bin/TOFCalibration debian/tmp/usr/bin/TOPPAS debian/tmp/usr/bin/TOPPView debian/tmp/usr/bin/TargetedFileConverter debian/tmp/usr/bin/TextExporter debian/tmp/usr/bin/TransformationEvaluation debian/tmp/usr/bin/XFDR debian/tmp/usr/bin/XMLValidator debian/tmp/usr/bin/XTandemAdapter debian/topp//usr/bin/ install -m0755 -d debian/topp/usr/share/applications cp --reflink=auto -a debian/tmp/usr/share/openms/DESKTOP/TOPPAS.desktop debian/tmp/usr/share/openms/DESKTOP/TOPPView.desktop debian/topp/usr/share/applications/ install -m0755 -d debian/topp/usr/share/metainfo cp --reflink=auto -a debian/tmp/usr/share/openms/DESKTOP/TOPPAS.appdata.xml debian/tmp/usr/share/openms/DESKTOP/TOPPView.appdata.xml debian/topp/usr/share/metainfo/ install -m0755 -d debian/topp/usr/share/pixmaps cp --reflink=auto -a ./debian/TOPPAS.xpm ./debian/TOPPView.xpm debian/topp/usr/share/pixmaps/ install -m0755 -d debian/openms-common//usr/share/openms cp --reflink=auto -a debian/tmp/usr/share/openms/CHEMISTRY debian/tmp/usr/share/openms/CV debian/tmp/usr/share/openms/DESKTOP debian/tmp/usr/share/openms/GUISTYLE debian/tmp/usr/share/openms/IDPool debian/tmp/usr/share/openms/MAPPING debian/tmp/usr/share/openms/PIP debian/tmp/usr/share/openms/SCHEMAS debian/tmp/usr/share/openms/SCRIPTS debian/tmp/usr/share/openms/TOOLS debian/tmp/usr/share/openms/XSL debian/openms-common//usr/share/openms/ install -m0755 -d debian/openms-doc/usr/share/doc/openms cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/html ./debian/tmp/usr/share/openms/examples debian/openms-doc/usr/share/doc/openms/ install -m0755 -d debian/openms-doc/usr/share/doc/openms/html cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/index.html debian/openms-doc/usr/share/doc/openms/html/ install -m0755 -d debian/openms-doc/usr/share/doc/openms/tutorials cp --reflink=auto -a ./debian/tmp/usr/share/doc/openms/OpenMS_tutorial.pdf ./debian/tmp/usr/share/doc/openms/TOPP_tutorial.pdf debian/openms-doc/usr/share/doc/openms/tutorials/ dh_installdocs -O--buildsystem=cmake -O--no-parallel dh_installdocs: warning: Could not parse openms-doc.doc-base.topp-tutorial for doc-base Document id; skipping install -m0755 -d debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0 install -p -m0644 debian/copyright debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/copyright install -m0755 -d debian/libopenms-dev/usr/share/doc/libopenms-dev install -p -m0644 debian/copyright debian/libopenms-dev/usr/share/doc/libopenms-dev/copyright install -m0755 -d debian/topp/usr/share/doc/topp install -p -m0644 debian/copyright debian/topp/usr/share/doc/topp/copyright install -m0755 -d debian/openms-common/usr/share/doc/openms-common install -p -m0644 debian/copyright debian/openms-common/usr/share/doc/openms-common/copyright install -m0755 -d debian/openms-doc/usr/share/doc/openms-doc install -p -m0644 debian/copyright debian/openms-doc/usr/share/doc/openms-doc/copyright install -m0755 -d debian/openms-doc/usr/share/doc-base/ install -p -m0644 debian/openms-doc.doc-base.libopenms-tutorial debian/openms-doc/usr/share/doc-base/openms-doc.libopenms-documentation install -m0755 -d debian/openms/usr/share/doc/openms install -m0755 -d debian/openms/usr/share/doc/openms cp --reflink=auto -a ./AUTHORS debian/openms/usr/share/doc/openms chown -R 0:0 debian/openms/usr/share/doc chmod -R u\+rw,go=rX debian/openms/usr/share/doc install -p -m0644 debian/copyright debian/openms/usr/share/doc/openms/copyright dh_installchangelogs -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0 install -p -m0644 debian/.debhelper/generated/libopenms2.6.0/dh_installchangelogs.dch.trimmed debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/changelog.Debian install -p -m0644 ./CHANGELOG debian/libopenms2.6.0/usr/share/doc/libopenms2.6.0/changelog install -m0755 -d debian/topp/usr/share/doc/topp install -p -m0644 debian/.debhelper/generated/topp/dh_installchangelogs.dch.trimmed debian/topp/usr/share/doc/topp/changelog.Debian install -p -m0644 ./CHANGELOG debian/topp/usr/share/doc/topp/changelog install -m0755 -d debian/openms-doc/usr/share/doc/openms-doc install -p -m0644 debian/.debhelper/generated/openms-doc/dh_installchangelogs.dch.trimmed debian/openms-doc/usr/share/doc/openms-doc/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms-doc/usr/share/doc/openms-doc/changelog install -m0755 -d debian/libopenms-dev/usr/share/doc/libopenms-dev install -p -m0644 debian/.debhelper/generated/libopenms-dev/dh_installchangelogs.dch.trimmed debian/libopenms-dev/usr/share/doc/libopenms-dev/changelog.Debian install -p -m0644 ./CHANGELOG debian/libopenms-dev/usr/share/doc/libopenms-dev/changelog install -m0755 -d debian/openms/usr/share/doc/openms install -p -m0644 debian/.debhelper/generated/openms/dh_installchangelogs.dch.trimmed debian/openms/usr/share/doc/openms/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms/usr/share/doc/openms/changelog install -m0755 -d debian/openms-common/usr/share/doc/openms-common install -p -m0644 debian/.debhelper/generated/openms-common/dh_installchangelogs.dch.trimmed debian/openms-common/usr/share/doc/openms-common/changelog.Debian install -p -m0644 ./CHANGELOG debian/openms-common/usr/share/doc/openms-common/changelog dh_installexamples -O--buildsystem=cmake -O--no-parallel dh_installman -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/topp/usr/share/man/man1/ install -p -m0644 ./debian/topp.1 debian/topp/usr/share/man/man1/topp.1 install -m0755 -d debian/libopenms2.6.0/usr/share/man/man3/ install -p -m0644 ./debian/libopenms.3 debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 install -m0755 -d debian/openms-common/usr/share/man/man7/ install -p -m0644 ./debian/openms-common.7 debian/openms-common/usr/share/man/man7/openms-common.7 install -m0755 -d debian/openms-doc/usr/share/man/man7/ install -p -m0644 ./debian/openms-doc.7 debian/openms-doc/usr/share/man/man7/openms-doc.7 install -m0755 -d debian/openms/usr/share/man/man7/ install -p -m0644 ./debian/openms.7 debian/openms/usr/share/man/man7/openms.7 man-recode --to-code UTF-8 --suffix .dh-new debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 man-recode --to-code UTF-8 --suffix .dh-new debian/topp/usr/share/man/man1/topp.1 man-recode --to-code UTF-8 --suffix .dh-new debian/openms-common/usr/share/man/man7/openms-common.7 man-recode --to-code UTF-8 --suffix .dh-new debian/openms-doc/usr/share/man/man7/openms-doc.7 man-recode --to-code UTF-8 --suffix .dh-new debian/openms/usr/share/man/man7/openms.7 mv debian/openms-doc/usr/share/man/man7/openms-doc.7.dh-new debian/openms-doc/usr/share/man/man7/openms-doc.7 chmod 0644 -- debian/openms-doc/usr/share/man/man7/openms-doc.7 mv debian/openms-common/usr/share/man/man7/openms-common.7.dh-new debian/openms-common/usr/share/man/man7/openms-common.7 chmod 0644 -- debian/openms-common/usr/share/man/man7/openms-common.7 mv debian/libopenms2.6.0/usr/share/man/man3/libopenms.3.dh-new debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 chmod 0644 -- debian/libopenms2.6.0/usr/share/man/man3/libopenms.3 mv debian/topp/usr/share/man/man1/topp.1.dh-new debian/topp/usr/share/man/man1/topp.1 chmod 0644 -- debian/topp/usr/share/man/man1/topp.1 mv debian/openms/usr/share/man/man7/openms.7.dh-new debian/openms/usr/share/man/man7/openms.7 chmod 0644 -- debian/openms/usr/share/man/man7/openms.7 dh_installcatalogs -O--buildsystem=cmake -O--no-parallel dh_installcron -O--buildsystem=cmake -O--no-parallel dh_installdebconf -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN dh_installemacsen -O--buildsystem=cmake -O--no-parallel dh_installifupdown -O--buildsystem=cmake -O--no-parallel dh_installinfo -O--buildsystem=cmake -O--no-parallel dh_installinit -O--buildsystem=cmake -O--no-parallel dh_installsystemd -O--buildsystem=cmake -O--no-parallel dh_installsystemduser -O--buildsystem=cmake -O--no-parallel dh_installmenu -O--buildsystem=cmake -O--no-parallel dh_installmime -O--buildsystem=cmake -O--no-parallel dh_installmodules -O--buildsystem=cmake -O--no-parallel dh_installlogcheck -O--buildsystem=cmake -O--no-parallel dh_installlogrotate -O--buildsystem=cmake -O--no-parallel dh_installpam -O--buildsystem=cmake -O--no-parallel dh_installppp -O--buildsystem=cmake -O--no-parallel dh_installudev -O--buildsystem=cmake -O--no-parallel dh_installgsettings -O--buildsystem=cmake -O--no-parallel dh_installinitramfs -O--buildsystem=cmake -O--no-parallel dh_installalternatives -O--buildsystem=cmake -O--no-parallel dh_bugfiles -O--buildsystem=cmake -O--no-parallel dh_ucf -O--buildsystem=cmake -O--no-parallel dh_lintian -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/share/lintian/overrides install -p -m0644 debian/libopenms2.6.0.lintian-overrides debian/libopenms2.6.0/usr/share/lintian/overrides/libopenms2.6.0 install -m0755 -d debian/topp/usr/share/lintian/overrides install -p -m0644 debian/topp.lintian-overrides debian/topp/usr/share/lintian/overrides/topp dh_icons -O--buildsystem=cmake -O--no-parallel dh_perl -O--buildsystem=cmake -O--no-parallel dh_usrlocal -O--buildsystem=cmake -O--no-parallel dh_link -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2 ln -s libSuperHirn.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2 ln -s libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2 ln -s libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2 install -m0755 -d debian/libopenms2.6.0/usr/lib/i386-linux-gnu rm -f debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2 ln -s libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2 install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libSuperHirn.so ln -s libSuperHirn.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libSuperHirn.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so ln -s libOpenSwathAlgo.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS_GUI.so ln -s libOpenMS_GUI.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS_GUI.so install -m0755 -d debian/libopenms-dev/usr/lib/i386-linux-gnu rm -f debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS.so ln -s libOpenMS.so.2.6.0 debian/libopenms-dev/usr/lib/i386-linux-gnu/libOpenMS.so install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/rules.1 ln -s topp.1 debian/topp/usr/share/man/man1/rules.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/libopenms-dev.links.1 ln -s topp.1 debian/topp/usr/share/man/man1/libopenms-dev.links.1 install -m0755 -d debian/topp/usr/share/man/man1 rm -f debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 ln -s topp.1 debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 dh_installwm -O--buildsystem=cmake -O--no-parallel dh_installxfonts -O--buildsystem=cmake -O--no-parallel dh_strip_nondeterminism -O--buildsystem=cmake -O--no-parallel Using 1703341241 as canonical time Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_results_2d.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_7_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_5_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_example_merger.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/SILACAnalyzer_algorithm.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_pp_picked.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_Ecoli_Identification.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_hd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_g.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_6_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/bc_sd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_9_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_9.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_f.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_noisefilter.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_4.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_s.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_example_profile_data_processing.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_1.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_h.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_0_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_labeled_quant.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_4_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/SwathWizard.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_parameters.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/bc_s.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_bd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_ad.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/splitbard.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_Quantitation.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_a.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Terms_Map.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_2_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_consensus_id.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_1D.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/INIFileEditor.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_h.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/sync_on.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Spectrum3DWidget.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/OpenMS_75x55_transparent.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_BSA_results_3d.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/OpenMS_overview.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_statistics.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_3.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Terms_Spectrum.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_run_options.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_qualitycontrol.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_hd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_3_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_6.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_sd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_0.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_baseline.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_raw_data.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/closed.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Spectrum2DWidget.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/MetaDataBrowser.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_alignment.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_icons.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_help.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_parts.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_5.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_simple_example.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/sync_off.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/Kernel_DataPoints.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_baseline_filtered.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/tab_b.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_7.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_menu.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPP_labelfree_quant.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/nav_fd.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_ff_centroided.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_8.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_8_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPAS_edges.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/TOPPView_tools_noisefilter_filtered.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_1_dark.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/splitbar.png using File::StripNondeterminism::handlers::png Normalizing debian/openms-doc/usr/share/doc/openms/html/form_2.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=cmake -O--no-parallel cd debian/libopenms2.6.0 cd debian/topp cd debian/libopenms-dev cd debian/openms-common cd debian/openms-doc cd debian/openms chmod a-x usr/share/doc/libopenms-dev/changelog usr/share/doc/libopenms-dev/changelog.Debian gzip -9nf usr/share/doc/libopenms-dev/changelog usr/share/doc/libopenms-dev/changelog.Debian chmod a-x usr/share/doc/libopenms2.6.0/changelog usr/share/doc/libopenms2.6.0/changelog.Debian usr/share/man/man3/libopenms.3 chmod a-x usr/share/doc/openms/changelog usr/share/doc/openms/changelog.Debian usr/share/man/man7/openms.7 gzip -9nf usr/share/doc/openms/changelog usr/share/doc/openms/changelog.Debian usr/share/man/man7/openms.7 gzip -9nf usr/share/doc/libopenms2.6.0/changelog usr/share/doc/libopenms2.6.0/changelog.Debian usr/share/man/man3/libopenms.3 chmod a-x usr/share/doc/openms-common/changelog usr/share/doc/openms-common/changelog.Debian usr/share/man/man7/openms-common.7 chmod a-x usr/share/doc/topp/changelog usr/share/doc/topp/changelog.Debian usr/share/man/man1/topp.1 gzip -9nf usr/share/doc/topp/changelog usr/share/doc/topp/changelog.Debian usr/share/man/man1/topp.1 gzip -9nf usr/share/doc/openms-common/changelog usr/share/doc/openms-common/changelog.Debian usr/share/man/man7/openms-common.7 cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' cd '/build/reproducible-path/openms-2.6.0+cleaned1' rm -f debian/topp/usr/share/man/man1/rules.1 debian/topp/usr/share/man/man1/rules.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/rules.1.gz rm -f debian/topp/usr/share/man/man1/libopenms-dev.links.1 debian/topp/usr/share/man/man1/libopenms-dev.links.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms-dev.links.1.gz rm -f debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1 debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/binaries-extract-one-line-man-desc.sh.1.gz rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.links.1 debian/topp/usr/share/man/man1/libopenms2.6.0.links.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms2.6.0.links.1.gz rm -f debian/topp/usr/share/man/man1/libopenms2.6.0.install.1 debian/topp/usr/share/man/man1/libopenms2.6.0.install.1.gz ln -s topp.1.gz debian/topp/usr/share/man/man1/libopenms2.6.0.install.1.gz chmod a-x usr/share/doc/openms-doc/changelog usr/share/doc/openms-doc/changelog.Debian usr/share/doc/openms/tutorials/OpenMS_tutorial.pdf usr/share/doc/openms/tutorials/TOPP_tutorial.pdf usr/share/man/man7/openms-doc.7 gzip -9nf usr/share/doc/openms-doc/changelog usr/share/doc/openms-doc/changelog.Debian usr/share/doc/openms/tutorials/OpenMS_tutorial.pdf usr/share/doc/openms/tutorials/TOPP_tutorial.pdf usr/share/man/man7/openms-doc.7 cd '/build/reproducible-path/openms-2.6.0+cleaned1' dh_fixperms -O--buildsystem=cmake -O--no-parallel find debian/libopenms2.6.0 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libopenms-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms-common -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/topp -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/openms ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/openms/usr/share/doc -type f -a -true -a ! -regex 'debian/openms/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0/usr/share/doc -type f -a -true -a ! -regex 'debian/libopenms2.6.0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms2.6.0/usr/share/man debian/libopenms2.6.0/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms2.6.0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/topp ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms2.6.0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/openms-common/usr/share/doc -type f -a -true -a ! -regex 'debian/openms-common/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/share/doc -type f -a -true -a ! -regex 'debian/topp/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/topp/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/openms-common/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/share/man debian/topp/usr/share/applications debian/topp/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-common -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/topp/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libopenms-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/openms-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libopenms-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libopenms-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/openms-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libopenms-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libopenms-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/openms-doc/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/openms-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -O--buildsystem=cmake -O--no-parallel dh_missing: warning: usr/lib/i386-linux-gnu/libOpenMS.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libOpenMS_GUI.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libOpenSwathAlgo.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/i386-linux-gnu/libSuperHirn.so exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/libOpenMS.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0") dh_missing: warning: usr/lib/libOpenMS_GUI.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0") dh_missing: warning: usr/lib/libOpenSwathAlgo.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0") dh_missing: warning: usr/lib/libSuperHirn.so.2.6.0 exists in debian/tmp but is not installed to anywhere (related file: "debian/tmp/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0") dh_missing: warning: usr/share/openms/THIRDPARTY/ReadMe.txt exists in debian/tmp but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * debian/tmp/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 with: * usr/lib/libOpenMS.so.2.6.0 in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: libopenms-dev (2), libopenms2.6.0 (4), openms (0), openms-common (11), openms-doc (5), topp (185) * dh_installdocs: libopenms-dev (0), libopenms2.6.0 (0), openms (1), openms-common (0), openms-doc (0), topp (0) * dh_installexamples: libopenms-dev (0), libopenms2.6.0 (0), openms (0), openms-common (0), openms-doc (0), topp (0) * dh_installinfo: libopenms-dev (0), libopenms2.6.0 (0), openms (0), openms-common (0), openms-doc (0), topp (0) * dh_installman: libopenms-dev (0), libopenms2.6.0 (1), openms (1), openms-common (1), openms-doc (1), topp (1) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "i386-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug -- debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/topp/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug -- debian/topp/usr/bin/AccurateMassSearch debian/topp/usr/bin/AssayGeneratorMetabo debian/topp/usr/bin/BaselineFilter debian/topp/usr/bin/CVInspector debian/topp/usr/bin/ClusterMassTraces debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/topp/usr/bin/CometAdapter debian/topp/usr/bin/CompNovo debian/topp/usr/bin/CompNovoCID debian/topp/usr/bin/ConsensusID debian/topp/usr/bin/ConsensusMapNormalizer debian/topp/usr/bin/CruxAdapter debian/topp/usr/bin/DTAExtractor debian/topp/usr/bin/DatabaseFilter debian/topp/usr/bin/DatabaseSuitability debian/topp/usr/bin/DeMeanderize debian/topp/usr/bin/Decharger debian/topp/usr/bin/DecoyDatabase debian/topp/usr/bin/Digestor debian/topp/usr/bin/DigestorMotif debian/topp/usr/bin/EICExtractor debian/topp/usr/bin/ERPairFinder debian/topp/usr/bin/Epifany debian/topp/usr/bin/ExecutePipeline debian/topp/usr/bin/ExternalCalibration debian/topp/usr/bin/FFEval debian/topp/usr/bin/FalseDiscoveryRate debian/topp/usr/bin/FeatureFinderCentroided debian/topp/usr/bin/FeatureFinderIdentification debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/topp/usr/bin/FeatureFinderMRM debian/topp/usr/bin/FeatureFinderMetabo debian/topp/usr/bin/FeatureFinderMetaboIdent debian/topp/usr/bin/FeatureFinderMultiplex debian/topp/usr/bin/FeatureFinderSuperHirn debian/topp/usr/bin/FeatureLinkerLabeled debian/topp/usr/bin/FeatureLinkerUnlabeled debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/topp/usr/bin/FidoAdapter debian/topp/usr/bin/FileConverter debian/topp/usr/bin/FileFilter debian/topp/usr/bin/FileInfo debian/topp/usr/bin/FileMerger debian/topp/usr/bin/FuzzyDiff debian/topp/usr/bin/GNPSExport debian/topp/usr/bin/GenericWrapper debian/topp/usr/bin/HighResPrecursorMassCorrector debian/topp/usr/bin/IDConflictResolver debian/topp/usr/bin/IDDecoyProbability debian/topp/usr/bin/IDExtractor debian/topp/usr/bin/IDFileConverter debian/topp/usr/bin/IDFilter debian/topp/usr/bin/IDMapper debian/topp/usr/bin/IDMassAccuracy debian/topp/usr/bin/IDMerger debian/topp/usr/bin/IDPosteriorErrorProbability debian/topp/usr/bin/IDRTCalibration debian/topp/usr/bin/IDRipper debian/topp/usr/bin/IDScoreSwitcher debian/topp/usr/bin/IDSplitter debian/topp/usr/bin/INIFileEditor debian/topp/usr/bin/INIUpdater debian/topp/usr/bin/ImageCreator debian/topp/usr/bin/InclusionExclusionListCreator debian/topp/usr/bin/InspectAdapter debian/topp/usr/bin/InternalCalibration debian/topp/usr/bin/IsobaricAnalyzer debian/topp/usr/bin/LabeledEval debian/topp/usr/bin/LuciphorAdapter debian/topp/usr/bin/MRMMapper debian/topp/usr/bin/MRMPairFinder debian/topp/usr/bin/MRMTransitionGroupPicker debian/topp/usr/bin/MSFraggerAdapter debian/topp/usr/bin/MSGFPlusAdapter debian/topp/usr/bin/MSSimulator debian/topp/usr/bin/MSstatsConverter debian/topp/usr/bin/MaRaClusterAdapter debian/topp/usr/bin/MapAlignerIdentification debian/topp/usr/bin/MapAlignerPoseClustering debian/topp/usr/bin/MapAlignerSpectrum debian/topp/usr/bin/MapAlignerTreeGuided debian/topp/usr/bin/MapNormalizer debian/topp/usr/bin/MapRTTransformer debian/topp/usr/bin/MapStatistics debian/topp/usr/bin/MascotAdapter debian/topp/usr/bin/MascotAdapterOnline debian/topp/usr/bin/MassCalculator debian/topp/usr/bin/MassTraceExtractor debian/topp/usr/bin/MetaProSIP debian/topp/usr/bin/MetaboliteAdductDecharger debian/topp/usr/bin/MetaboliteSpectralMatcher debian/topp/usr/bin/MultiplexResolver debian/topp/usr/bin/MyriMatchAdapter debian/topp/usr/bin/MzMLSplitter debian/topp/usr/bin/MzTabExporter debian/topp/usr/bin/NoiseFilterGaussian debian/topp/usr/bin/NoiseFilterSGolay debian/topp/usr/bin/NovorAdapter debian/topp/usr/bin/NucleicAcidSearchEngine debian/topp/usr/bin/OMSSAAdapter debian/topp/usr/bin/OpenMSInfo debian/topp/usr/bin/OpenPepXL debian/topp/usr/bin/OpenPepXLLF debian/topp/usr/bin/OpenSwathAnalyzer debian/topp/usr/bin/OpenSwathAssayGenerator debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/topp/usr/bin/OpenSwathConfidenceScoring debian/topp/usr/bin/OpenSwathDIAPreScoring debian/topp/usr/bin/OpenSwathDecoyGenerator debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/topp/usr/bin/OpenSwathFileSplitter debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/topp/usr/bin/OpenSwathRTNormalizer debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/topp/usr/bin/OpenSwathWorkflow debian/topp/usr/bin/PSMFeatureExtractor debian/topp/usr/bin/PTModel debian/topp/usr/bin/PTPredict debian/topp/usr/bin/PeakPickerHiRes debian/topp/usr/bin/PeakPickerIterative debian/topp/usr/bin/PeakPickerWavelet debian/topp/usr/bin/PepNovoAdapter debian/topp/usr/bin/PeptideIndexer debian/topp/usr/bin/PercolatorAdapter debian/topp/usr/bin/PhosphoScoring debian/topp/usr/bin/PrecursorIonSelector debian/topp/usr/bin/PrecursorMassCorrector debian/topp/usr/bin/ProteinInference debian/topp/usr/bin/ProteinQuantifier debian/topp/usr/bin/ProteinResolver debian/topp/usr/bin/ProteomicsLFQ debian/topp/usr/bin/QCCalculator debian/topp/usr/bin/QCEmbedder debian/topp/usr/bin/QCExporter debian/topp/usr/bin/QCExtractor debian/topp/usr/bin/QCImporter debian/topp/usr/bin/QCMerger debian/topp/usr/bin/QCShrinker debian/topp/usr/bin/QualityControl debian/topp/usr/bin/RNADigestor debian/topp/usr/bin/RNAMassCalculator debian/topp/usr/bin/RNPxlSearch debian/topp/usr/bin/RNPxlXICFilter debian/topp/usr/bin/RTEvaluation debian/topp/usr/bin/RTModel debian/topp/usr/bin/RTPredict debian/topp/usr/bin/Resampler debian/topp/usr/bin/SeedListGenerator debian/topp/usr/bin/SemanticValidator debian/topp/usr/bin/SequenceCoverageCalculator debian/topp/usr/bin/SimpleSearchEngine debian/topp/usr/bin/SiriusAdapter debian/topp/usr/bin/SpecLibCreator debian/topp/usr/bin/SpecLibSearcher debian/topp/usr/bin/SpectraFilterBernNorm debian/topp/usr/bin/SpectraFilterMarkerMower debian/topp/usr/bin/SpectraFilterNLargest debian/topp/usr/bin/SpectraFilterNormalizer debian/topp/usr/bin/SpectraFilterParentPeakMower debian/topp/usr/bin/SpectraFilterScaler debian/topp/usr/bin/SpectraFilterSqrtMower debian/topp/usr/bin/SpectraFilterThresholdMower debian/topp/usr/bin/SpectraFilterWindowMower debian/topp/usr/bin/SpectraMerger debian/topp/usr/bin/SpectraSTSearchAdapter debian/topp/usr/bin/StaticModification debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/topp/usr/bin/SwathWizard debian/topp/usr/bin/TICCalculator debian/topp/usr/bin/TOFCalibration debian/topp/usr/bin/TOPPAS debian/topp/usr/bin/TOPPView debian/topp/usr/bin/TargetedFileConverter debian/topp/usr/bin/TextExporter debian/topp/usr/bin/TransformationEvaluation debian/topp/usr/bin/XFDR debian/topp/usr/bin/XMLValidator debian/topp/usr/bin/XTandemAdapter objcopy --compress-debug-sections debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug chmod 0644 -- debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug chown 0:0 -- debian/topp/usr/lib/debug/.dwz/i386-linux-gnu/topp.debug dwz: debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0: DWARF compression not beneficial - old size 323398246 new size 324945945 objcopy --compress-debug-sections debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug chmod 0644 -- debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug chown 0:0 -- debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu/libopenms2.6.0.debug dh_strip -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/HighResPrecursorMassCorrector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/HighResPrecursorMassCorrector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5b/b1268141e0c1af094552e27d280bf0627f92c5.debug debian/topp/usr/bin/HighResPrecursorMassCorrector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FileConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9d/384acd9c9e4398cb0adad1ba075ec4bd9e0178.debug debian/topp/usr/bin/FileConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMTransitionGroupPicker debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/58/cb0c157120e98a786fd62e9b57aa03bde523d8.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MRMTransitionGroupPicker objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/82/17ef85a26fc345398ff79aeb65f64b2b7ad690.debug debian/topp/usr/bin/MRMTransitionGroupPicker install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNPxlXICFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNPxlXICFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/35bca6257dea1e2c0b9442e8bb01912aa69315.debug debian/topp/usr/bin/RNPxlXICFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinResolver objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/75/8e7cb0b7dccecbb084b8b6babfa5dc8a6036d9.debug debian/topp/usr/bin/ProteinResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QualityControl debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QualityControl objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/b29caefee8e34c076a3f0fc6ffb16d417c3d5e.debug debian/topp/usr/bin/QualityControl install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinInference debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinInference objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c8/8379d94f236f2782ae647230e80880ad47c38a.debug debian/topp/usr/bin/ProteinInference install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PSMFeatureExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PSMFeatureExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/46/b82db7ee26bef656042a1823a0285bfb777688.debug debian/topp/usr/bin/PSMFeatureExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/INIFileEditor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/INIFileEditor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c2/c3d957c57258ef0bc0c5505bca0bb5ab9571c3.debug debian/topp/usr/bin/INIFileEditor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterNLargest debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterNLargest objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c4/d83959fc7f1b0e5d56c3fb442f781c55b4d666.debug debian/topp/usr/bin/SpectraFilterNLargest install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDScoreSwitcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDScoreSwitcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/dbc13277df22a53def46b7b6b9ecbe38eb57c4.debug debian/topp/usr/bin/IDScoreSwitcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDPosteriorErrorProbability debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDPosteriorErrorProbability objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/02/79a817336ab17ca069b375b2f9a7c9afc0509c.debug debian/topp/usr/bin/IDPosteriorErrorProbability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderIdentification debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderIdentification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/2236f96b801d785af5f638e8ab060fa770c71b.debug debian/topp/usr/bin/FeatureFinderIdentification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MassTraceExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MassTraceExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/c74f9ee348576a633bf299b76b2536a40ce89b.debug debian/topp/usr/bin/MassTraceExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DTAExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DTAExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/033404a8c5af230acda19f01ab8bf57679f503.debug debian/topp/usr/bin/DTAExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/169bc2c973ce478507700762f42f0c51ec4e66.debug debian/topp/usr/bin/QCExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterBernNorm debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterBernNorm objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ce/640c3c240db2f07c3e377ecfaf4b52b60cd818.debug debian/topp/usr/bin/SpectraFilterBernNorm install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MultiplexResolver debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MultiplexResolver objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4f/c43367bbdcfc13a4c8f6f732e3cb233eff7ae0.debug debian/topp/usr/bin/MultiplexResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathWorkflow debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathWorkflow objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/22a9717de2a247f7be808c5656b7159a9f5e19.debug debian/topp/usr/bin/OpenSwathWorkflow install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/Epifany debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6/193d999b1c8a8cc1ff0099e3674acae6888494.debug chmod 0644 -- 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/41c014e30dd53c9fd36cfacf4f9619f1ac3a56.debug debian/topp/usr/bin/QCMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMultiplex debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMultiplex objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/ea6196d92311f49667047732a792c1808840db.debug debian/topp/usr/bin/FeatureFinderMultiplex install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CometAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4b/1c006fb053a7b90f7c7e40476cfe06d7b1fda9.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4b/1c006fb053a7b90f7c7e40476cfe06d7b1fda9.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4b/1c006fb053a7b90f7c7e40476cfe06d7b1fda9.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CometAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4b/1c006fb053a7b90f7c7e40476cfe06d7b1fda9.debug debian/topp/usr/bin/CometAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/97 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FidoAdapter 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56/3303441586040ff6b9e172c2d78145f9bebcfb.debug debian/topp/usr/bin/MapRTTransformer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NoiseFilterGaussian debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NoiseFilterGaussian objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cc/bf94d441c753c03c5c99fa289705e910faf1a6.debug debian/topp/usr/bin/NoiseFilterGaussian install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MyriMatchAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MyriMatchAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/4e07c2c03765d5d780093c7e58b51ca185cb1b.debug debian/topp/usr/bin/MyriMatchAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDSplitter 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/48bf707e6083db29f6fb38f1b6ffc823ba5070.debug debian/topp/usr/bin/InspectAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RNPxlSearch debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RNPxlSearch objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a4/08cf9b6d011de5260b5ae804ce170591c091b3.debug debian/topp/usr/bin/RNPxlSearch install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerIdentification debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerIdentification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/2c5e899679a70db739c5aabfff4762dd036c43.debug debian/topp/usr/bin/MapAlignerIdentification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TransformationEvaluation 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/TextExporter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/80/302608c6a2d3ce2915fa2a9f4f0bdb101b8d45.debug debian/topp/usr/bin/TextExporter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PrecursorMassCorrector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/5167f6300746798f9250d5688d9bfde9b9dc25.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PrecursorMassCorrector objcopy --add-gnu-debuglink 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileInfo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/e9de160d3dc26531dac0f0bd8701f5fc723e68.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/e9de160d3dc26531dac0f0bd8701f5fc723e68.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/e9de160d3dc26531dac0f0bd8701f5fc723e68.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FileInfo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/e9de160d3dc26531dac0f0bd8701f5fc723e68.debug debian/topp/usr/bin/FileInfo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileFilter 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debian/topp/usr/bin/ExecutePipeline install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CompNovoCID debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d/1420ecfddeed1dd7cdd41314dd4c89ae42a195.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d/1420ecfddeed1dd7cdd41314dd4c89ae42a195.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d/1420ecfddeed1dd7cdd41314dd4c89ae42a195.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CompNovoCID objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/6d/1420ecfddeed1dd7cdd41314dd4c89ae42a195.debug debian/topp/usr/bin/CompNovoCID install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/28 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraMerger 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d1/9b0dd7e44113cad345db4cd805d4a51904df8e.debug debian/topp/usr/bin/SeedListGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTEvaluation debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b/521f469ad82932422fb00e86799a579b265626.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b/521f469ad82932422fb00e86799a579b265626.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b/521f469ad82932422fb00e86799a579b265626.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTEvaluation objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1b/521f469ad82932422fb00e86799a579b265626.debug debian/topp/usr/bin/RTEvaluation install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SemanticValidator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/8de17d3bc3eaf941872c000912a1ffee68a5e8.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/8de17d3bc3eaf941872c000912a1ffee68a5e8.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/8de17d3bc3eaf941872c000912a1ffee68a5e8.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SemanticValidator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1f/8de17d3bc3eaf941872c000912a1ffee68a5e8.debug debian/topp/usr/bin/SemanticValidator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/19 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/AccurateMassSearch 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debian/topp/usr/bin/IDConflictResolver install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/4215955e9239a29b536eccfc237ed30be3ceac.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/4215955e9239a29b536eccfc237ed30be3ceac.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/4215955e9239a29b536eccfc237ed30be3ceac.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathFeatureXMLToTSV objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fa/4215955e9239a29b536eccfc237ed30be3ceac.debug debian/topp/usr/bin/OpenSwathFeatureXMLToTSV install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/38 objcopy --only-keep-debug --compress-debug-sections 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--only-keep-debug --compress-debug-sections debian/topp/usr/bin/ExternalCalibration debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/d987e2486fca6ae627e84ea20cc73729701ce2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/d987e2486fca6ae627e84ea20cc73729701ce2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/d987e2486fca6ae627e84ea20cc73729701ce2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ExternalCalibration objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/cf/d987e2486fca6ae627e84ea20cc73729701ce2.debug debian/topp/usr/bin/ExternalCalibration install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCEmbedder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e2/756e9e6e849707e5be9b9a6452475638a2988c.debug chmod 0644 -- 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/QCShrinker objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b0/f2974c5ae9bfc6e1f82d1e16e766217b8df1d4.debug debian/topp/usr/bin/QCShrinker install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMPairFinder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/b7cd729827705ddd202bcce9fb313082f1b4f4.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/b7cd729827705ddd202bcce9fb313082f1b4f4.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/b7cd729827705ddd202bcce9fb313082f1b4f4.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MRMPairFinder objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/b7cd729827705ddd202bcce9fb313082f1b4f4.debug debian/topp/usr/bin/MRMPairFinder install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MRMMapper debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/dc6dafb83b70ddd76dcf3d4180e28fca4390ba.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/dc6dafb83b70ddd76dcf3d4180e28fca4390ba.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/dc6dafb83b70ddd76dcf3d4180e28fca4390ba.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MRMMapper objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53/dc6dafb83b70ddd76dcf3d4180e28fca4390ba.debug debian/topp/usr/bin/MRMMapper install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/InclusionExclusionListCreator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/98e7648c504a0152bdccd71a6df4c361086e0f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/98e7648c504a0152bdccd71a6df4c361086e0f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/98e7648c504a0152bdccd71a6df4c361086e0f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/InclusionExclusionListCreator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/62/98e7648c504a0152bdccd71a6df4c361086e0f.debug debian/topp/usr/bin/InclusionExclusionListCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MSGFPlusAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSGFPlusAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/89494d2147471bf7c6fa45a9c879c790480ac2.debug debian/topp/usr/bin/MSGFPlusAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MzMLSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MzMLSplitter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/30/c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b.debug debian/topp/usr/bin/MzMLSplitter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathDecoyGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathDecoyGenerator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/34/3c6b1982a4692cf4838686394a72942c8a1084.debug debian/topp/usr/bin/OpenSwathDecoyGenerator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CompNovo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CompNovo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e1/b93faacfd5ac2c6800036df98a5f2ff11d9d0f.debug debian/topp/usr/bin/CompNovo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/EICExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/EICExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/e253458326935720691b151c127e7646eeaa43.debug debian/topp/usr/bin/EICExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OMSSAAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OMSSAAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/25/aab4a5c0e03e686dfe5880b422ac369aa73009.debug debian/topp/usr/bin/OMSSAAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PTPredict debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PTPredict objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/39/4ffc163e55a2f3821087b4c32620e005b05f1d.debug debian/topp/usr/bin/PTPredict install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathDIAPreScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/68/c9abae4c9a6464b64cb46e16aaf5e795ab72fd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/68/c9abae4c9a6464b64cb46e16aaf5e795ab72fd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/68/c9abae4c9a6464b64cb46e16aaf5e795ab72fd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathDIAPreScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/68/c9abae4c9a6464b64cb46e16aaf5e795ab72fd.debug debian/topp/usr/bin/OpenSwathDIAPreScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/StaticModification debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/44484d137f24d01b6c892c008adb1330f9c261.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/44484d137f24d01b6c892c008adb1330f9c261.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/44484d137f24d01b6c892c008adb1330f9c261.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/StaticModification objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/44484d137f24d01b6c892c008adb1330f9c261.debug debian/topp/usr/bin/StaticModification install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderCentroided debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/20384201207ac406c322150e6201e25cf9425c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/20384201207ac406c322150e6201e25cf9425c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/20384201207ac406c322150e6201e25cf9425c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderCentroided objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a9/20384201207ac406c322150e6201e25cf9425c.debug debian/topp/usr/bin/FeatureFinderCentroided install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MSstatsConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/898aa2af285158568a3e58b17471f723f92d2e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/898aa2af285158568a3e58b17471f723f92d2e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/898aa2af285158568a3e58b17471f723f92d2e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSstatsConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/52/898aa2af285158568a3e58b17471f723f92d2e.debug debian/topp/usr/bin/MSstatsConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerLabeled debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerLabeled objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d4/1ad1bed622a1b67b4f62ced97f2c853b84e28e.debug debian/topp/usr/bin/FeatureLinkerLabeled install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathRTNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21/9c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/21/9c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a.debug chown 0:0 -- 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7d/670cb60d952abfa5584286b06489f5b32944fe.debug debian/topp/usr/bin/PrecursorIonSelector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MassCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MassCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8c/3d7e10521a61931c89d513ddbf5e45a30d8548.debug debian/topp/usr/bin/MassCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterScaler debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/34d615a8e16a3c9c784a8230739cab16b1f1f2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/34d615a8e16a3c9c784a8230739cab16b1f1f2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/34d615a8e16a3c9c784a8230739cab16b1f1f2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterScaler objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/66/34d615a8e16a3c9c784a8230739cab16b1f1f2.debug debian/topp/usr/bin/SpectraFilterScaler install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/QCImporter 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objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOPPAS debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/aa0693d467e2d3ea2b27323225fe1c85405766.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/aa0693d467e2d3ea2b27323225fe1c85405766.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/aa0693d467e2d3ea2b27323225fe1c85405766.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TOPPAS objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/aa0693d467e2d3ea2b27323225fe1c85405766.debug debian/topp/usr/bin/TOPPAS install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MascotAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/45/486900a280499e9ce0bd35d3b4ec1f83969857.debug chmod 0644 -- 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/Resampler objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/97/16cf85150308899875c9305cf874feea875e35.debug debian/topp/usr/bin/Resampler install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathConfidenceScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/48/13ce6e5f8ad88a63c94c64bd45fedf3c06af78.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathConfidenceScoring objcopy --add-gnu-debuglink 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objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ClusterMassTraces debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/73/1e01dbe169d41a1df08f14ec8edaa8a1223107.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/73/1e01dbe169d41a1df08f14ec8edaa8a1223107.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/73/1e01dbe169d41a1df08f14ec8edaa8a1223107.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ClusterMassTraces objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/73/1e01dbe169d41a1df08f14ec8edaa8a1223107.debug debian/topp/usr/bin/ClusterMassTraces install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathAssayGenerator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3f/5d302ed4b98dc1c4941de2b9e713f1b2f3c16c.debug chmod 0644 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c0/6f7e28bfd7f8700f318241744fe98581f54ffe.debug debian/topp/usr/bin/AssayGeneratorMetabo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaProSIP debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a1/e0e08de67dfba6f45f231f62ab366a381193fd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a1/e0e08de67dfba6f45f231f62ab366a381193fd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a1/e0e08de67dfba6f45f231f62ab366a381193fd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaProSIP objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a1/e0e08de67dfba6f45f231f62ab366a381193fd.debug debian/topp/usr/bin/MetaProSIP install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/af objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterNormalizer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/af/0004306f2cfd621f1dc80aa6e081c29effec2c.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/af/0004306f2cfd621f1dc80aa6e081c29effec2c.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/af/0004306f2cfd621f1dc80aa6e081c29effec2c.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterNormalizer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/af/0004306f2cfd621f1dc80aa6e081c29effec2c.debug debian/topp/usr/bin/SpectraFilterNormalizer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/78 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PepNovoAdapter 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/22/61b29dc25dbd4bdb7791dc7026a56013c83e1b.debug debian/topp/usr/bin/SpectraFilterMarkerMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MascotAdapterOnline debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MascotAdapterOnline objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c3/94b515c5787e32a936d70c3710eb954583e926.debug debian/topp/usr/bin/MascotAdapterOnline install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FileMerger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fe/1ea4e3a793339a8730f629fa28ef9738f25c5d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fe/1ea4e3a793339a8730f629fa28ef9738f25c5d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fe/1ea4e3a793339a8730f629fa28ef9738f25c5d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FileMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/fe/1ea4e3a793339a8730f629fa28ef9738f25c5d.debug debian/topp/usr/bin/FileMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMetaboIdent 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objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/23/d3f0ef9ed280c1cd8f59340bb11626f8577118.debug debian/topp/usr/bin/DatabaseSuitability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaboliteAdductDecharger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaboliteAdductDecharger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/14/c65b10b4e29f1cca6db39a9e8291f9e2a2a87d.debug debian/topp/usr/bin/MetaboliteAdductDecharger install -m0755 -d 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--only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteinQuantifier debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ProteinQuantifier objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a5/0f0994619633073c8c1e6d48a99bc8ea686468.debug debian/topp/usr/bin/ProteinQuantifier install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeled debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/1435cb525d7dfe5c058548e3e5184a7c0a853d.debug chmod 0644 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenPepXLLF debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenPepXLLF objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ff/f8c0abe7b358129ddf14f7f92be41952c047ee.debug debian/topp/usr/bin/OpenPepXLLF install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/53 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOFCalibration 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--only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathFileSplitter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathFileSplitter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/9af9af24b1c8ed83f0ab188ba66a3f330e8cc2.debug debian/topp/usr/bin/OpenSwathFileSplitter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraSTSearchAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b1/9481b60d4c2470ffba1a57a9f6661f070b6907.debug chmod 0644 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d7/23bbfa03f78b5018d90aeab64a13673dfbfa2f.debug debian/topp/usr/bin/RNADigestor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FuzzyDiff debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FuzzyDiff objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/40/01c59aa31c3b493d84babdece8f404c29f2664.debug debian/topp/usr/bin/FuzzyDiff install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PhosphoScoring debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PhosphoScoring objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/c7cd6105d09b07d484bb49f8de861918b7e4cc.debug debian/topp/usr/bin/PhosphoScoring install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TOPPView debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/a7/2a8656cf2b00f85eb695042c650fc945674eda.debug chmod 0644 -- 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--remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDDecoyProbability objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/55/8c4726e0ae4d0d78265879405b410db28e290f.debug debian/topp/usr/bin/IDDecoyProbability install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterThresholdMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterThresholdMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b3/bc5bf6df2309ccf9d757eab5907add280500be.debug debian/topp/usr/bin/SpectraFilterThresholdMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenMSInfo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenMSInfo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/7bf617bf29ecd5479c04b494fea8b14c04dc7f.debug debian/topp/usr/bin/OpenMSInfo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MSFraggerAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MSFraggerAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/7a/becb2926547db2a3033cda02f09693f55b6aac.debug debian/topp/usr/bin/MSFraggerAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NoiseFilterSGolay debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/1e/62887efec6dbe891dbb5a34775183588a5e303.debug chmod 0644 -- 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debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/11/a2296b1c26ca41d012c8a3d1670bfea881dca4.debug debian/topp/usr/bin/PercolatorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMRM debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMRM objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/76/1a2683716458d2b1bdd11d68936debb4b4d80b.debug debian/topp/usr/bin/FeatureFinderMRM install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/NovorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/NovorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/425185552253e69c7f02a49b55380b5b0c481a.debug debian/topp/usr/bin/NovorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenPepXL debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenPepXL objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c5/e903437a34d67a7d796b85783b8b1c4ace5045.debug debian/topp/usr/bin/OpenPepXL install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterWindowMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/05/d2219c271bd5f61e6f74bc02816a2d35775c4b.debug chmod 0644 -- 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3a/f505e71921cca9342c53598bb33e042cf8e655.debug debian/topp/usr/bin/MapAlignerPoseClustering install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerSpectrum debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerSpectrum objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9b/ea42ccec6014f6d2dae08be709fa68aa4beecb.debug debian/topp/usr/bin/MapAlignerSpectrum install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpecLibCreator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpecLibCreator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4a/29df229dddfacc1d8d215bce54b71ef0362834.debug debian/topp/usr/bin/SpecLibCreator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/33 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ProteomicsLFQ 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--add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3d/7566a19a308220be0d36e702f77425b8a9f45e.debug debian/topp/usr/bin/SimpleSearchEngine install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTPredict debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTPredict objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/0b/4d4499b2f78d7406e8dc15e887d42bece2ba2e.debug debian/topp/usr/bin/RTPredict install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeledKD objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/4c/39196461ced455575400293a155279143ddc33.debug debian/topp/usr/bin/FeatureLinkerUnlabeledKD install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/RTModel debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/RTModel objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/96/d34e9a08d8d8504fdd304db9412c2a05991023.debug debian/topp/usr/bin/RTModel install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XMLValidator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XMLValidator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ac/8f7fba23330b30e5e0a97bcaec6e7261a2d992.debug debian/topp/usr/bin/XMLValidator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureFinderMetabo debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureFinderMetabo objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/72/f48c3865d637a929a8a0b16dc2c412fb37205a.debug debian/topp/usr/bin/FeatureFinderMetabo install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FeatureLinkerUnlabeledQT objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/49/114bd9d4af8aa300b494be548f605a2d409df5.debug debian/topp/usr/bin/FeatureLinkerUnlabeledQT install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XTandemAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XTandemAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/2c/ec8c0ad34e3bb06c0fde991b013399362f5bb7.debug debian/topp/usr/bin/XTandemAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/TICCalculator debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/TICCalculator objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/3e/04dd6ee01e3ff8f932c56c8df56addcb18b8e2.debug debian/topp/usr/bin/TICCalculator install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IsobaricAnalyzer debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IsobaricAnalyzer objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/77/951e9760dd31e5ffcb01da7044a2b480325133.debug debian/topp/usr/bin/IsobaricAnalyzer install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathChromatogramExtractor objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ba/2384b0b76bea5695bf64a26cbbe5238041080f.debug debian/topp/usr/bin/OpenSwathChromatogramExtractor install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeakPickerHiRes debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeakPickerHiRes objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9a/f427103662bb2a3ad7e5b6398478e107030f66.debug debian/topp/usr/bin/PeakPickerHiRes install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DigestorMotif debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DigestorMotif objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/09/93839da390e3a88628253a4bb74f42211e5fc8.debug debian/topp/usr/bin/DigestorMotif install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDFileConverter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDFileConverter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/51/0d48c8a7ac74848cddde14db0c1aa75f07034a.debug debian/topp/usr/bin/IDFileConverter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/CVInspector debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/CVInspector objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/9f/25f3b4562d83b6893faaf816251270d7e8ad10.debug debian/topp/usr/bin/CVInspector install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/DatabaseFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/DatabaseFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ed/a34de88c0fde88536ed56e5be9f5603f7363bd.debug debian/topp/usr/bin/DatabaseFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MetaboliteSpectralMatcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MetaboliteSpectralMatcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/87/5f5e2deeb94f5ce92c5ccf9db7a9494571e154.debug debian/topp/usr/bin/MetaboliteSpectralMatcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MaRaClusterAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MaRaClusterAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d9/38e4d2f809f92bb9f3c68095830addf087b749.debug debian/topp/usr/bin/MaRaClusterAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/BaselineFilter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/BaselineFilter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/c7/5a1fdc32798da05ab617ff721723d9284ae1da.debug debian/topp/usr/bin/BaselineFilter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/XFDR debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/XFDR objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/8e/64c404c5428022d0a5bec9d9a8845778f3f0ec.debug debian/topp/usr/bin/XFDR install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/ERPairFinder debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/ERPairFinder objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/5c/cd4cbfdc4a5a5575fdfee7c984c77dd114fda5.debug debian/topp/usr/bin/ERPairFinder install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/IDMerger debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/IDMerger objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/da/8d91f27a049867a333d42e245bda06373447c2.debug debian/topp/usr/bin/IDMerger install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/OpenSwathRewriteToFeatureXML objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/b2/5e44e3dd462f4b630a5888476802dac6f6a7fe.debug debian/topp/usr/bin/OpenSwathRewriteToFeatureXML install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/PeakPickerWavelet debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/PeakPickerWavelet objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/36/804dd7e11d9ad03d3465c648410c0f642e1fe6.debug debian/topp/usr/bin/PeakPickerWavelet install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterParentPeakMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterParentPeakMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/ab/b69152641a7334af86b28956c1f0cf6e2a4407.debug debian/topp/usr/bin/SpectraFilterParentPeakMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpectraFilterSqrtMower debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpectraFilterSqrtMower objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/f9/1272b72b15cac44a1289e3c3410057a101fd11.debug debian/topp/usr/bin/SpectraFilterSqrtMower install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/LuciphorAdapter debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/LuciphorAdapter objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/d6/7b30b98cedc0a0fd13fbd5e44f49e40988029b.debug debian/topp/usr/bin/LuciphorAdapter install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/SpecLibSearcher debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/SpecLibSearcher objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/e7/1380f25b2976c959ff1603d06e5c87507eb799.debug debian/topp/usr/bin/SpecLibSearcher install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/MapAlignerTreeGuided debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/MapAlignerTreeGuided objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/dd/692aadf710f6af2d3bbdabbdf72a90507253d5.debug debian/topp/usr/bin/MapAlignerTreeGuided install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/topp/usr/bin/FalseDiscoveryRate debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug chmod 0644 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug chown 0:0 -- debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug strip --remove-section=.comment --remove-section=.note debian/topp/usr/bin/FalseDiscoveryRate objcopy --add-gnu-debuglink debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.build-id/bc/000c3e463184b6a3e21b4df3621adda4feaa58.debug debian/topp/usr/bin/FalseDiscoveryRate install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/topp/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/topp/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/topp/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/topp/usr/lib/debug install -m0755 -d debian/.debhelper/topp/dbgsym-root/usr/share/doc ln -s topp debian/.debhelper/topp/dbgsym-root/usr/share/doc/topp-dbgsym install -m0755 -d debian/.debhelper/topp chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/04/da00ce5ee498b5513bec28e8300728490afcc7.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/ce/1b20f4f547d04228a6771c4668729d59760e93.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 objcopy --add-gnu-debuglink debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.build-id/a3/b9a9ba1c2c990a507be4841078eb95791b84ac.debug debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libopenms2.6.0/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libopenms2.6.0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libopenms2.6.0/usr/lib/debug install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/share/doc ln -s libopenms2.6.0 debian/.debhelper/libopenms2.6.0/dbgsym-root/usr/share/doc/libopenms2.6.0-dbgsym install -m0755 -d debian/.debhelper/libopenms2.6.0 dh_makeshlibs -O--buildsystem=cmake -O--no-parallel rm -f debian/libopenms2.6.0/DEBIAN/shlibs install -m0755 -d debian/libopenms2.6.0/DEBIAN echo "libOpenMS 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libOpenMS_GUI 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libOpenSwathAlgo 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs echo "libSuperHirn 2.6.0 libopenms2.6.0 (>= 2.6.0+cleaned1)" >> debian/libopenms2.6.0/DEBIAN/shlibs chmod 0644 -- debian/libopenms2.6.0/DEBIAN/shlibs chown 0:0 -- debian/libopenms2.6.0/DEBIAN/shlibs mv debian/.debhelper/generated/libopenms2.6.0/triggers.new debian/.debhelper/generated/libopenms2.6.0/triggers rm -f debian/libopenms-dev/DEBIAN/shlibs rm -f debian/topp/DEBIAN/shlibs rm -f debian/openms-common/DEBIAN/shlibs rm -f debian/openms-doc/DEBIAN/shlibs rm -f debian/openms/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN dpkg-shlibdeps -Tdebian/libopenms2.6.0.substvars debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libSuperHirn.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenMS_GUI.so.2.6.0 debian/libopenms2.6.0/usr/lib/i386-linux-gnu/libOpenSwathAlgo.so.2.6.0 install -m0755 -d debian/topp/DEBIAN dpkg-shlibdeps -Tdebian/topp.substvars debian/topp/usr/bin/HighResPrecursorMassCorrector debian/topp/usr/bin/FileConverter debian/topp/usr/bin/MRMTransitionGroupPicker debian/topp/usr/bin/RNPxlXICFilter debian/topp/usr/bin/ProteinResolver debian/topp/usr/bin/QualityControl debian/topp/usr/bin/ProteinInference debian/topp/usr/bin/PSMFeatureExtractor debian/topp/usr/bin/INIFileEditor debian/topp/usr/bin/SpectraFilterNLargest debian/topp/usr/bin/IDScoreSwitcher debian/topp/usr/bin/IDPosteriorErrorProbability debian/topp/usr/bin/FeatureFinderIdentification debian/topp/usr/bin/MassTraceExtractor debian/topp/usr/bin/DTAExtractor debian/topp/usr/bin/QCExtractor debian/topp/usr/bin/SpectraFilterBernNorm debian/topp/usr/bin/MultiplexResolver debian/topp/usr/bin/OpenSwathWorkflow debian/topp/usr/bin/Epifany debian/topp/usr/bin/QCMerger debian/topp/usr/bin/FeatureFinderMultiplex debian/topp/usr/bin/CometAdapter debian/topp/usr/bin/FidoAdapter debian/topp/usr/bin/MSSimulator debian/topp/usr/bin/MapRTTransformer debian/topp/usr/bin/NoiseFilterGaussian debian/topp/usr/bin/MyriMatchAdapter debian/topp/usr/bin/IDSplitter debian/topp/usr/bin/ImageCreator debian/topp/usr/bin/InspectAdapter debian/topp/usr/bin/RNPxlSearch debian/topp/usr/bin/MapAlignerIdentification debian/topp/usr/bin/TransformationEvaluation debian/topp/usr/bin/IDExtractor debian/topp/usr/bin/TextExporter debian/topp/usr/bin/PrecursorMassCorrector debian/topp/usr/bin/PeptideIndexer debian/topp/usr/bin/FileInfo debian/topp/usr/bin/FileFilter debian/topp/usr/bin/RNAMassCalculator debian/topp/usr/bin/ClusterMassTracesByPrecursor debian/topp/usr/bin/ExecutePipeline debian/topp/usr/bin/CompNovoCID debian/topp/usr/bin/SpectraMerger debian/topp/usr/bin/PeakPickerIterative debian/topp/usr/bin/DecoyDatabase debian/topp/usr/bin/SeedListGenerator debian/topp/usr/bin/RTEvaluation debian/topp/usr/bin/SemanticValidator debian/topp/usr/bin/AccurateMassSearch debian/topp/usr/bin/NucleicAcidSearchEngine debian/topp/usr/bin/SvmTheoreticalSpectrumGeneratorTrainer debian/topp/usr/bin/FeatureFinderIsotopeWavelet debian/topp/usr/bin/IDConflictResolver debian/topp/usr/bin/OpenSwathFeatureXMLToTSV debian/topp/usr/bin/CruxAdapter debian/topp/usr/bin/TargetedFileConverter debian/topp/usr/bin/INIUpdater debian/topp/usr/bin/MapStatistics debian/topp/usr/bin/IDRipper debian/topp/usr/bin/ExternalCalibration debian/topp/usr/bin/QCEmbedder debian/topp/usr/bin/QCShrinker debian/topp/usr/bin/MRMPairFinder debian/topp/usr/bin/MRMMapper debian/topp/usr/bin/InclusionExclusionListCreator debian/topp/usr/bin/MSGFPlusAdapter debian/topp/usr/bin/MzMLSplitter debian/topp/usr/bin/OpenSwathDecoyGenerator debian/topp/usr/bin/CompNovo debian/topp/usr/bin/EICExtractor debian/topp/usr/bin/OMSSAAdapter debian/topp/usr/bin/PTPredict debian/topp/usr/bin/OpenSwathDIAPreScoring debian/topp/usr/bin/StaticModification debian/topp/usr/bin/FeatureFinderCentroided debian/topp/usr/bin/MSstatsConverter debian/topp/usr/bin/FeatureLinkerLabeled debian/topp/usr/bin/OpenSwathRTNormalizer debian/topp/usr/bin/PrecursorIonSelector debian/topp/usr/bin/MassCalculator debian/topp/usr/bin/SpectraFilterScaler debian/topp/usr/bin/QCImporter debian/topp/usr/bin/LabeledEval debian/topp/usr/bin/InternalCalibration debian/topp/usr/bin/PTModel debian/topp/usr/bin/TOPPAS debian/topp/usr/bin/MascotAdapter debian/topp/usr/bin/Resampler debian/topp/usr/bin/OpenSwathConfidenceScoring debian/topp/usr/bin/SwathWizard debian/topp/usr/bin/ClusterMassTraces debian/topp/usr/bin/OpenSwathAssayGenerator debian/topp/usr/bin/SiriusAdapter debian/topp/usr/bin/AssayGeneratorMetabo debian/topp/usr/bin/MetaProSIP debian/topp/usr/bin/SpectraFilterNormalizer debian/topp/usr/bin/PepNovoAdapter debian/topp/usr/bin/QCCalculator debian/topp/usr/bin/SpectraFilterMarkerMower debian/topp/usr/bin/MascotAdapterOnline debian/topp/usr/bin/FileMerger debian/topp/usr/bin/FeatureFinderMetaboIdent debian/topp/usr/bin/MapNormalizer debian/topp/usr/bin/FeatureFinderSuperHirn debian/topp/usr/bin/DatabaseSuitability debian/topp/usr/bin/MetaboliteAdductDecharger debian/topp/usr/bin/ConsensusMapNormalizer debian/topp/usr/bin/ConsensusID debian/topp/usr/bin/DeMeanderize debian/topp/usr/bin/QCExporter debian/topp/usr/bin/GNPSExport debian/topp/usr/bin/ProteinQuantifier debian/topp/usr/bin/FeatureLinkerUnlabeled debian/topp/usr/bin/FFEval debian/topp/usr/bin/IDFilter debian/topp/usr/bin/OpenSwathMzMLFileCacher debian/topp/usr/bin/OpenPepXLLF debian/topp/usr/bin/TOFCalibration debian/topp/usr/bin/GenericWrapper debian/topp/usr/bin/IDRTCalibration debian/topp/usr/bin/MzTabExporter debian/topp/usr/bin/Digestor debian/topp/usr/bin/OpenSwathFileSplitter debian/topp/usr/bin/SpectraSTSearchAdapter debian/topp/usr/bin/OpenSwathAnalyzer debian/topp/usr/bin/RNADigestor debian/topp/usr/bin/FuzzyDiff debian/topp/usr/bin/PhosphoScoring debian/topp/usr/bin/TOPPView debian/topp/usr/bin/IDDecoyProbability debian/topp/usr/bin/SpectraFilterThresholdMower debian/topp/usr/bin/OpenMSInfo debian/topp/usr/bin/MSFraggerAdapter debian/topp/usr/bin/NoiseFilterSGolay debian/topp/usr/bin/IDMapper debian/topp/usr/bin/PercolatorAdapter debian/topp/usr/bin/FeatureFinderMRM debian/topp/usr/bin/NovorAdapter debian/topp/usr/bin/OpenPepXL debian/topp/usr/bin/SpectraFilterWindowMower debian/topp/usr/bin/Decharger debian/topp/usr/bin/MapAlignerPoseClustering debian/topp/usr/bin/MapAlignerSpectrum debian/topp/usr/bin/SpecLibCreator debian/topp/usr/bin/ProteomicsLFQ debian/topp/usr/bin/SequenceCoverageCalculator debian/topp/usr/bin/IDMassAccuracy debian/topp/usr/bin/SimpleSearchEngine debian/topp/usr/bin/RTPredict debian/topp/usr/bin/FeatureLinkerUnlabeledKD debian/topp/usr/bin/RTModel debian/topp/usr/bin/XMLValidator debian/topp/usr/bin/FeatureFinderMetabo debian/topp/usr/bin/FeatureLinkerUnlabeledQT debian/topp/usr/bin/XTandemAdapter debian/topp/usr/bin/TICCalculator debian/topp/usr/bin/IsobaricAnalyzer debian/topp/usr/bin/OpenSwathChromatogramExtractor debian/topp/usr/bin/PeakPickerHiRes debian/topp/usr/bin/DigestorMotif debian/topp/usr/bin/IDFileConverter debian/topp/usr/bin/CVInspector debian/topp/usr/bin/DatabaseFilter debian/topp/usr/bin/MetaboliteSpectralMatcher debian/topp/usr/bin/MaRaClusterAdapter debian/topp/usr/bin/BaselineFilter debian/topp/usr/bin/XFDR debian/topp/usr/bin/ERPairFinder debian/topp/usr/bin/IDMerger debian/topp/usr/bin/OpenSwathRewriteToFeatureXML debian/topp/usr/bin/PeakPickerWavelet debian/topp/usr/bin/SpectraFilterParentPeakMower debian/topp/usr/bin/SpectraFilterSqrtMower debian/topp/usr/bin/LuciphorAdapter debian/topp/usr/bin/SpecLibSearcher debian/topp/usr/bin/MapAlignerTreeGuided debian/topp/usr/bin/FalseDiscoveryRate dh_installdeb -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN install -p -m0644 debian/.debhelper/generated/libopenms2.6.0/triggers debian/libopenms2.6.0/DEBIAN/triggers install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/openms/DEBIAN dh_gencontrol -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/libopenms2.6.0/DEBIAN echo misc:Depends= >> debian/libopenms2.6.0.substvars echo misc:Pre-Depends= >> debian/libopenms2.6.0.substvars install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN dpkg-gencontrol -plibopenms2.6.0 -ldebian/changelog -Tdebian/libopenms2.6.0.substvars -cdebian/control -Pdebian/.debhelper/libopenms2.6.0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libopenms2.6.0-dbgsym "-DDepends=libopenms2.6.0 (= \${binary:Version})" "-DDescription=debug symbols for libopenms2.6.0" "-DBuild-Ids=04da00ce5ee498b5513bec28e8300728490afcc7 58cb0c157120e98a786fd62e9b57aa03bde523d8 a3b9a9ba1c2c990a507be4841078eb95791b84ac ce1b20f4f547d04228a6771c4668729d59760e93" -DSection=debug -UReplaces -UBreaks install -m0755 -d debian/libopenms-dev/DEBIAN echo misc:Depends= >> debian/libopenms-dev.substvars echo misc:Pre-Depends= >> debian/libopenms-dev.substvars dpkg-gencontrol -plibopenms-dev -ldebian/changelog -Tdebian/libopenms-dev.substvars -cdebian/control -Pdebian/libopenms-dev install -m0755 -d debian/openms-doc/DEBIAN echo misc:Depends= >> debian/openms-doc.substvars echo misc:Pre-Depends= >> debian/openms-doc.substvars dpkg-gencontrol -popenms-doc -ldebian/changelog -Tdebian/openms-doc.substvars -cdebian/control -Pdebian/openms-doc install -m0755 -d debian/openms-common/DEBIAN echo misc:Depends= >> debian/openms-common.substvars echo misc:Pre-Depends= >> debian/openms-common.substvars dpkg-gencontrol -popenms-common -ldebian/changelog -Tdebian/openms-common.substvars -cdebian/control -Pdebian/openms-common install -m0755 -d debian/openms/DEBIAN echo misc:Depends= >> debian/openms.substvars echo misc:Pre-Depends= >> debian/openms.substvars dpkg-gencontrol -popenms -ldebian/changelog -Tdebian/openms.substvars -cdebian/control -Pdebian/openms install -m0755 -d debian/topp/DEBIAN echo misc:Depends= >> debian/topp.substvars echo misc:Pre-Depends= >> debian/topp.substvars install -m0755 -d debian/.debhelper/topp/dbgsym-root/DEBIAN dpkg-gencontrol -ptopp -ldebian/changelog -Tdebian/topp.substvars -cdebian/control -Pdebian/.debhelper/topp/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=topp-dbgsym "-DDepends=topp (= \${binary:Version})" "-DDescription=debug symbols for topp" "-DBuild-Ids=01d0f74f92299e6dd1846fec948f2f64cf35435c 0279a817336ab17ca069b375b2f9a7c9afc0509c 05d054470384641315d8d18877a71b446045a1ed 05d2219c271bd5f61e6f74bc02816a2d35775c4b 0993839da390e3a88628253a4bb74f42211e5fc8 0a049c021315b2e5ab9580bc47549266765c473c 0b4d4499b2f78d7406e8dc15e887d42bece2ba2e 0ed3b1c20f702fd61561d931a2c4a0797d4699a5 11a2296b1c26ca41d012c8a3d1670bfea881dca4 1446fd1ee9682151677285c3681c80fd74440a3c 14c65b10b4e29f1cca6db39a9e8291f9e2a2a87d 14e9be788757e1215f5a19cee0a21239927c1a7d 19444485f02b7d6c9f47b374f3a32c146d940f48 1b521f469ad82932422fb00e86799a579b265626 1e35bca6257dea1e2c0b9442e8bb01912aa69315 1e62887efec6dbe891dbb5a34775183588a5e303 1f7b123939c6e86b7bd51c9fe827ea1f7c5d575e 1f8de17d3bc3eaf941872c000912a1ffee68a5e8 219c67fb6d2cc1a2bcf96946cd4d0743a6cb5a0a 2261b29dc25dbd4bdb7791dc7026a56013c83e1b 23d3f0ef9ed280c1cd8f59340bb11626f8577118 2589494d2147471bf7c6fa45a9c879c790480ac2 25aab4a5c0e03e686dfe5880b422ac369aa73009 282b97ed63ae5e7915e9ae03d49f82c7147b03e6 2c22a9717de2a247f7be808c5656b7159a9f5e19 2cec8c0ad34e3bb06c0fde991b013399362f5bb7 30c5d1f3dcd0140a427d4e8273dc8b85ad2fe49b 33cead0e486e4a1ffc3eb7f608791b77d774137f 343c6b1982a4692cf4838686394a72942c8a1084 3609c33e761c669ed4af1b136a93feae11810237 36804dd7e11d9ad03d3465c648410c0f642e1fe6 3841dd16e2eb81dcbacf8df22445f3302f2126df 389dcdec63f4cb9b61f9d126ae8b6edad10c117e 394ffc163e55a2f3821087b4c32620e005b05f1d 3af505e71921cca9342c53598bb33e042cf8e655 3b8fd464459d8016b39677dce49b8bfa063d7589 3cd95ac9c537203f3f38fb8f986247b2d105e4e3 3d7566a19a308220be0d36e702f77425b8a9f45e 3e04dd6ee01e3ff8f932c56c8df56addcb18b8e2 3f564a5ebace1c97d88a55d47479c18c80520099 3f5d302ed4b98dc1c4941de2b9e713f1b2f3c16c 4001c59aa31c3b493d84babdece8f404c29f2664 40b7cd729827705ddd202bcce9fb313082f1b4f4 41896c365e13294e1d3dffc7c9a94416081f8f55 42eb37347311175415c2d307e5d129b223b81458 45486900a280499e9ce0bd35d3b4ec1f83969857 46b82db7ee26bef656042a1823a0285bfb777688 4813ce6e5f8ad88a63c94c64bd45fedf3c06af78 49114bd9d4af8aa300b494be548f605a2d409df5 4a29df229dddfacc1d8d215bce54b71ef0362834 4b1c006fb053a7b90f7c7e40476cfe06d7b1fda9 4c2cdf3a0a5d498a980a16e31aa74ae389655849 4c39196461ced455575400293a155279143ddc33 4fc43367bbdcfc13a4c8f6f732e3cb233eff7ae0 4fdbc13277df22a53def46b7b6b9ecbe38eb57c4 510d48c8a7ac74848cddde14db0c1aa75f07034a 52898aa2af285158568a3e58b17471f723f92d2e 539f857213e1830f935e142fe2b6175351b7f97b 53dc6dafb83b70ddd76dcf3d4180e28fca4390ba 558c4726e0ae4d0d78265879405b410db28e290f 5616b7348ea87379abb164c5a1ee39d174c664a6 563303441586040ff6b9e172c2d78145f9bebcfb 5bb1268141e0c1af094552e27d280bf0627f92c5 5c425185552253e69c7f02a49b55380b5b0c481a 5ccd4cbfdc4a5a5575fdfee7c984c77dd114fda5 624e07c2c03765d5d780093c7e58b51ca185cb1b 6298e7648c504a0152bdccd71a6df4c361086e0f 65cf6aaa34f3af57879159dffc030b8a3d86e507 6634d615a8e16a3c9c784a8230739cab16b1f1f2 66c74f9ee348576a633bf299b76b2536a40ce89b 68c9abae4c9a6464b64cb46e16aaf5e795ab72fd 6d1420ecfddeed1dd7cdd41314dd4c89ae42a195 72f48c3865d637a929a8a0b16dc2c412fb37205a 731e01dbe169d41a1df08f14ec8edaa8a1223107 758e7cb0b7dccecbb084b8b6babfa5dc8a6036d9 761a2683716458d2b1bdd11d68936debb4b4d80b 7744484d137f24d01b6c892c008adb1330f9c261 77877fef4a4489f33d871ed540eb7f40f2db4bf3 77951e9760dd31e5ffcb01da7044a2b480325133 782d866ac69a0513d05660cd55e155271bbd1d0a 7abecb2926547db2a3033cda02f09693f55b6aac 7d670cb60d952abfa5584286b06489f5b32944fe 7d6f236f7f43dce12d6bcc0d4aca5a34d0b61119 7e62129225acef9aa5549420a950c153ba6642d0 7e65b46c8713774d8a8a559b5f1254611c1f1847 7e75f05605f142c18b8f465db3c6285122090618 80302608c6a2d3ce2915fa2a9f4f0bdb101b8d45 8217ef85a26fc345398ff79aeb65f64b2b7ad690 844e32774a3da528efe66114914b36aa057c3eb4 875f5e2deeb94f5ce92c5ccf9db7a9494571e154 877bf617bf29ecd5479c04b494fea8b14c04dc7f 87b29caefee8e34c076a3f0fc6ffb16d417c3d5e 8c3d7e10521a61931c89d513ddbf5e45a30d8548 8c9cd8d84529a528a6782791780e239fd8afa190 8e64c404c5428022d0a5bec9d9a8845778f3f0ec 906a0816a3edf5b104ea7180c146c415c039a155 922fa8b079518a44d8338c09bd2149d1bc9f6416 946444dfdd3322cce8fc65703b52e9c84fab2119 96d34e9a08d8d8504fdd304db9412c2a05991023 9716cf85150308899875c9305cf874feea875e35 97ce2db0d9756ba26051c87f530b8aa074f6f6a5 9a033404a8c5af230acda19f01ab8bf57679f503 9af427103662bb2a3ad7e5b6398478e107030f66 9bdca2596ebd8fce9f848b55a4b9e1d3e03b497f 9bea42ccec6014f6d2dae08be709fa68aa4beecb 9ca87bbda39bba6f1f6ee59552395e5eaac712bd 9d384acd9c9e4398cb0adad1ba075ec4bd9e0178 9f25f3b4562d83b6893faaf816251270d7e8ad10 a1e0e08de67dfba6f45f231f62ab366a381193fd a408cf9b6d011de5260b5ae804ce170591c091b3 a426fd1081b09500bda5084d39d04d92178619b5 a50f0994619633073c8c1e6d48a99bc8ea686468 a71435cb525d7dfe5c058548e3e5184a7c0a853d a72a8656cf2b00f85eb695042c650fc945674eda a920384201207ac406c322150e6201e25cf9425c a941c014e30dd53c9fd36cfacf4f9619f1ac3a56 abb69152641a7334af86b28956c1f0cf6e2a4407 ac8f7fba23330b30e5e0a97bcaec6e7261a2d992 acc7cd6105d09b07d484bb49f8de861918b7e4cc ade13d5a461884801175b08925d2b89a69442df2 af0004306f2cfd621f1dc80aa6e081c29effec2c b008aa26f3024dc8707250727f82e141c39b0fce b0f2974c5ae9bfc6e1f82d1e16e766217b8df1d4 b15167f6300746798f9250d5688d9bfde9b9dc25 b19481b60d4c2470ffba1a57a9f6661f070b6907 b2277f8e473c13094a18a3ced688d92fbcd0e1da b25e44e3dd462f4b630a5888476802dac6f6a7fe b3bc5bf6df2309ccf9d757eab5907add280500be b478b2a22cbe5aeadf060393bcaa770530cd5bc8 b6193d999b1c8a8cc1ff0099e3674acae6888494 b620f1e9284fb396fba0f826134d128a3619f414 ba2384b0b76bea5695bf64a26cbbe5238041080f bc000c3e463184b6a3e21b4df3621adda4feaa58 bc4aaf1ed1fd10aaab01acae3a77748cbb051108 c02236f96b801d785af5f638e8ab060fa770c71b c06f7e28bfd7f8700f318241744fe98581f54ffe c2c3d957c57258ef0bc0c5505bca0bb5ab9571c3 c394b515c5787e32a936d70c3710eb954583e926 c4d83959fc7f1b0e5d56c3fb442f781c55b4d666 c5e903437a34d67a7d796b85783b8b1c4ace5045 c75a1fdc32798da05ab617ff721723d9284ae1da c7aa0693d467e2d3ea2b27323225fe1c85405766 c88379d94f236f2782ae647230e80880ad47c38a cb0b604229b26102c320e3d454935f0cadd07170 ccbf94d441c753c03c5c99fa289705e910faf1a6 cd02f55436aa8497563ac281cd9f2a91d7701976 ce2995630cbba6a2e11c5ac6d5e4b6f709387d32 ce640c3c240db2f07c3e377ecfaf4b52b60cd818 cfd987e2486fca6ae627e84ea20cc73729701ce2 d038fa0304b9c7df243c20a74d8ab9990e1a9480 d086b5454cec8aac3f62a4c6af2315e2e45499e4 d19b0dd7e44113cad345db4cd805d4a51904df8e d1ea6196d92311f49667047732a792c1808840db d41ad1bed622a1b67b4f62ced97f2c853b84e28e d593bbc7c82c971851cf99b3d334c1a6789b61d3 d67b30b98cedc0a0fd13fbd5e44f49e40988029b d723bbfa03f78b5018d90aeab64a13673dfbfa2f d7e253458326935720691b151c127e7646eeaa43 d938e4d2f809f92bb9f3c68095830addf087b749 da8d91f27a049867a333d42e245bda06373447c2 dd692aadf710f6af2d3bbdabbdf72a90507253d5 dd9af9af24b1c8ed83f0ab188ba66a3f330e8cc2 e1b93faacfd5ac2c6800036df98a5f2ff11d9d0f e248bf707e6083db29f6fb38f1b6ffc823ba5070 e2756e9e6e849707e5be9b9a6452475638a2988c e5298575f3f3d5d098a2e6982bd59f2c21058666 e71380f25b2976c959ff1603d06e5c87507eb799 e7169bc2c973ce478507700762f42f0c51ec4e66 ed2c5e899679a70db739c5aabfff4762dd036c43 eda34de88c0fde88536ed56e5be9f5603f7363bd ede9de160d3dc26531dac0f0bd8701f5fc723e68 f7fd0d56f7dd71f460c2af31a6d7388157d9c20a f91272b72b15cac44a1289e3c3410057a101fd11 fa4215955e9239a29b536eccfc237ed30be3ceac fa45a9ebcf1035353a5754f68cc95a237b5558af fe1ea4e3a793339a8730f629fa28ef9738f25c5d ff5c81d99596a17cedf20375b8e3fea964b3fae4 ff5ead2d952b4b0aeda421b0daf3146dba0db017 fff8c0abe7b358129ddf14f7f92be41952c047ee" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibopenms2.6.0 -ldebian/changelog -Tdebian/libopenms2.6.0.substvars -cdebian/control -Pdebian/libopenms2.6.0 chmod 0644 -- debian/openms/DEBIAN/control chown 0:0 -- debian/openms/DEBIAN/control chmod 0644 -- debian/openms-common/DEBIAN/control chown 0:0 -- debian/openms-common/DEBIAN/control chmod 0644 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptopp -ldebian/changelog -Tdebian/topp.substvars -cdebian/control -Pdebian/topp chmod 0644 -- debian/libopenms2.6.0/DEBIAN/control chown 0:0 -- debian/libopenms2.6.0/DEBIAN/control chmod 0644 -- debian/libopenms-dev/DEBIAN/control chown 0:0 -- debian/libopenms-dev/DEBIAN/control chmod 0644 -- debian/openms-doc/DEBIAN/control chown 0:0 -- debian/openms-doc/DEBIAN/control chmod 0644 -- debian/topp/DEBIAN/control chown 0:0 -- debian/topp/DEBIAN/control dh_md5sums -O--buildsystem=cmake -O--no-parallel install -m0755 -d debian/openms/DEBIAN install -m0755 -d debian/openms-doc/DEBIAN install -m0755 -d debian/libopenms2.6.0/DEBIAN install -m0755 -d debian/libopenms-dev/DEBIAN install -m0755 -d debian/topp/DEBIAN install -m0755 -d debian/openms-common/DEBIAN cd debian/openms >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libopenms2.6.0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/topp >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/openms-common >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/openms-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libopenms-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/openms/DEBIAN/md5sums chown 0:0 -- debian/openms/DEBIAN/md5sums chmod 0644 -- debian/topp/DEBIAN/md5sums chown 0:0 -- debian/topp/DEBIAN/md5sums install -m0755 -d debian/.debhelper/topp/dbgsym-root/DEBIAN chmod 0644 -- debian/libopenms-dev/DEBIAN/md5sums chown 0:0 -- debian/libopenms-dev/DEBIAN/md5sums cd debian/.debhelper/topp/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libopenms2.6.0/DEBIAN/md5sums chown 0:0 -- debian/libopenms2.6.0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN cd debian/.debhelper/libopenms2.6.0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/topp/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/openms-common/DEBIAN/md5sums chown 0:0 -- debian/openms-common/DEBIAN/md5sums chmod 0644 -- debian/openms-doc/DEBIAN/md5sums chown 0:0 -- debian/openms-doc/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libopenms2.6.0/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=cmake -O--no-parallel dpkg-deb --build debian/libopenms2.6.0 .. dpkg-deb --root-owner-group --build debian/.debhelper/libopenms2.6.0/dbgsym-root .. dpkg-deb --build debian/libopenms-dev .. dpkg-deb --build debian/topp .. dpkg-deb --root-owner-group --build debian/.debhelper/topp/dbgsym-root .. dpkg-deb --build debian/openms-common .. dpkg-deb --build debian/openms-doc .. dpkg-deb --build debian/openms .. dpkg-deb: building package 'libopenms-dev' in '../libopenms-dev_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'topp-dbgsym' in '../topp-dbgsym_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'topp' in '../topp_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms' in '../openms_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'openms-common' in '../openms-common_2.6.0+cleaned1-4_all.deb'. dpkg-deb: building package 'libopenms2.6.0-dbgsym' in '../libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'libopenms2.6.0' in '../libopenms2.6.0_2.6.0+cleaned1-4_i386.deb'. dpkg-deb: building package 'openms-doc' in '../openms-doc_2.6.0+cleaned1-4_all.deb'. dpkg-genbuildinfo --build=binary -O../openms_2.6.0+cleaned1-4_i386.buildinfo dpkg-genchanges --build=binary -O../openms_2.6.0+cleaned1-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21273 and its subdirectories I: Current time: Fri May 3 19:13:35 -12 2024 I: pbuilder-time-stamp: 1714806815 Sat May 4 07:13:44 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_3-24485.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/openms_2.6.0+cleaned1-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/openms_2.6.0+cleaned1-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/openms_2.6.0+cleaned1-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/b1/openms_2.6.0+cleaned1-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.rpvECzzW/b2/openms_2.6.0+cleaned1-4_i386.changes ## close_archive (total time: 0.001s) 0.000s 28 calls diffoscope.comparators.xz.XzContainer 0.000s 24 calls diffoscope.comparators.tar.TarContainer 0.000s 12 calls diffoscope.comparators.deb.DebContainer 0.000s 4 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 1732.383s) 887.574s 88 calls objdump 658.119s 47 calls diff 131.621s 314 calls readelf 33.344s 2 calls objcopy 20.505s 30 calls xz 1.180s 11 calls strings 0.018s 4 calls cmp 0.018s 4 calls cmp (external) 0.002s 25 calls cmp (internal) ## compare_files (cumulative) (total time: 52339.399s) 8736.444s 1 call abc.DotChangesFile 8736.402s 2 calls abc.DebFile 8736.277s 4 calls abc.XzFile 8733.912s 2 calls abc.DebDataTarFile 8732.175s 1 call abc.ElfFile 8662.019s 4 calls diffoscope.comparators.elf.ElfCodeSection 2.000s 2 calls diffoscope.comparators.elf.ElfSection 0.108s 2 calls abc.TarFile 0.043s 2 calls abc.Md5sumsFile 0.020s 1 call abc.TextFile ## container_extract (total time: 23.628s) 20.507s 30 calls diffoscope.comparators.xz.XzContainer 1.600s 34 calls diffoscope.comparators.deb.DebContainer 1.499s 1806 calls diffoscope.comparators.deb.DebTarContainer 0.022s 32 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.544s) 0.544s 6 calls linediff ## has_same_content_as (total time: 0.023s) 0.014s 2 calls abc.DebDataTarFile 0.004s 4 calls abc.Md5sumsFile 0.002s 2 calls abc.TarFile 0.001s 7 calls abc.TextFile 0.001s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.001s 4 calls abc.XzFile 0.000s 2 calls abc.DebFile 0.000s 1 call abc.ElfFile 0.000s 1 call abc.DotChangesFile 0.000s 4 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 2 calls diffoscope.comparators.elf.ElfSection ## main (total time: 8741.533s) 8741.227s 2 calls outputs 0.306s 1 call cleanup ## open_archive (total time: 0.001s) 0.000s 30 calls diffoscope.comparators.xz.XzContainer 0.000s 24 calls diffoscope.comparators.tar.TarContainer 0.000s 20 calls diffoscope.comparators.deb.DebContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 0.667s) 0.665s 1 call html 0.002s 1 call text 0.001s 1 call json ## recognizes (total time: 25.197s) 18.390s 1500 calls diffoscope.comparators.utils.archive.ArchiveMember 3.760s 12 calls diffoscope.comparators.binary.FilesystemFile 2.903s 2742 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.144s 540 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.211s) 0.211s 33 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 2h 25min 41.893s CPU time consumed: 2h 28min 52.492s Sat May 4 09:39:26 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Sat May 4 09:39:26 UTC 2024 E: openms failed to build reproducibly in unstable on i386. Sat May 4 09:39:28 UTC 2024 I: Submitting .buildinfo files to external archives: Sat May 4 09:39:28 UTC 2024 I: Submitting 20K b1/openms_2.6.0+cleaned1-4_i386.buildinfo.asc Sat May 4 09:39:29 UTC 2024 I: Submitting 20K b2/openms_2.6.0+cleaned1-4_i386.buildinfo.asc Sat May 4 09:39:30 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat May 4 09:39:30 UTC 2024 I: Done submitting .buildinfo files. Sat May 4 09:39:30 UTC 2024 I: Removing signed openms_2.6.0+cleaned1-4_i386.buildinfo.asc files: removed './b1/openms_2.6.0+cleaned1-4_i386.buildinfo.asc' removed './b2/openms_2.6.0+cleaned1-4_i386.buildinfo.asc'